mRNA_H-elongata_contig19383.5381.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: A0A6H5L8C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8C0_9PHAE) HSP 1 Score: 369 bits (946), Expect = 1.420e-122 Identity = 173/223 (77.58%), Postives = 198/223 (88.79%), Query Frame = 1
Query: 1 RVKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVKK 669
+VKTRQHVNPLAATFQ PV LPE WF +AF +P APLLVDIGCAKG+F+ +MA +P++N+LGLEIRRP AALAL R LGTRNCH VCCN NVDLDAVL+EAA++GASIDT+CIQFPDPHFKTKHYKRR++QPELV CIE+HL PGG LFMQSDVL+V+EDMR+I RETA +LED+RPDMEDWMEGP++NPFGVQTEREKVTY KE ENRVYRC+FVKK
Sbjct: 148 KVKTRQHVNPLAATFQAPVVLPERWFQAAFRDPTAPLLVDIGCAKGSFVRAMATEHPERNYLGLEIRRPTAALALERAARLGTRNCHVVCCNANVDLDAVLTEAAQHGASIDTVCIQFPDPHFKTKHYKRRVLQPELVTCIEKHLEPGGTLFMQSDVLEVVEDMRVIARETARVLEDTRPDMEDWMEGPDKNPFGVQTEREKVTYEKESAEENRVYRCVFVKK 370
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: D7FPV8_ECTSI (tRNA (Guanine-N(7)-)-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV8_ECTSI) HSP 1 Score: 363 bits (932), Expect = 1.660e-122 Identity = 171/223 (76.68%), Postives = 198/223 (88.79%), Query Frame = 1
Query: 1 RVKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVKK 669
+VKTRQHVNPLAATFQ PV LPE WF +AF + +APLLVDIGCAKG+F+ +MA +P++N+LGLEIRRP AALAL R LGTRNCH VCCN NVDLDAVL+EAA++GASIDT+CIQFPDPHFKT+HYKRR++QPELV CIE+HL PGG LFMQSDVL+V+EDMR+I RETA +LED+RPDMEDWMEGP++NPFGVQTEREKVTY KE ENRVYRC+FVKK
Sbjct: 11 KVKTRQHVNPLAATFQAPVVLPERWFQAAFRDLSAPLLVDIGCAKGSFVRAMATEHPERNYLGLEIRRPTAALALERAAGLGTRNCHVVCCNANVDLDAVLTEAAQHGASIDTVCIQFPDPHFKTRHYKRRVLQPELVTCIEKHLEPGGTLFMQSDVLEVVEDMRVIARETARVLEDTRPDMEDWMEGPDKNPFGVQTEREKVTYEKESAEENRVYRCVFVKK 233
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: A0A835ZDY0_9STRA (Guanine-N(7)--methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY0_9STRA) HSP 1 Score: 213 bits (541), Expect = 3.970e-63 Identity = 102/223 (45.74%), Postives = 146/223 (65.47%), Query Frame = 1
Query: 1 RVKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVKK 669
++K RQHVNPLA++ QQPV L +GW+ AF + PL +DIGCA G F + MA A P +N+LGL+IR P+ A+AL + E NCH + CN NV+L+ +L + G ++ + +QFPDPHFKT++ K+R+++PELVE I++ L PGG LFMQ D+ +V +MR+ITR+ L+D +++ W+ NP G+ TERE K VYRCMF K+
Sbjct: 47 KLKARQHVNPLASSHQQPVQLVDGWYRKAFADTTKPLHLDIGCAYGRFCLDMATADPTRNYLGLDIRWPVVAVALCKATERTLDNCHFISCNANVNLERILGDVIAAGGVVERVSVQFPDPHFKTRNKKKRVLKPELVETIQQFLSPGGTLFMQGDIHEVQREMRLITRKVGTGLQDLEANVDSWLS---HNPMGIPTERELAVQAK----GGDVYRCMFKKR 262
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: A0A0G4HX35_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HX35_9ALVE) HSP 1 Score: 185 bits (470), Expect = 1.700e-51 Identity = 97/218 (44.50%), Postives = 128/218 (58.72%), Query Frame = 1
Query: 7 KTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMF 660
K R+H NPLAA P+DLPE W F N + P+++D+GCA G + + MA+ P NFLG+E+R P AL R G N + N VD D++L + + +G + + +QFPDPHFK H KRR+V V HL+ G +F+QSD+L+V EDMR R L DSR +EDWMEG E NPFGV TERE+ E P +YRC+F
Sbjct: 76 KPREHANPLAALHLSPIDLPEDWVSQVFANASQPVILDVGCAFGGWALQMAQKEPGVNFLGIELRGPPVEKALDRKDASGLTNLAYLKVNTLVDFDSILRDLSSDGCGVTYVTVQFPDPHFKKSHKKRRVVNRSFVGSCAVHLKEGAHVFLQSDILEVAEDMREHFRSAGPLFRDSRASVEDWMEG-EANPFGVPTERERGRIENEEP----IYRCVF 288
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: A0A7S2ZC14_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZC14_9RHOD) HSP 1 Score: 175 bits (444), Expect = 8.600e-49 Identity = 99/216 (45.83%), Postives = 130/216 (60.19%), Query Frame = 1
Query: 1 RVKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVY 648
+V+TRQHVNPL+ Q+PV+L + W + FE+ VD+G AKG FL MA+ PD+NFLGLEIR+P+ A + RN + CN NV LD VLS +DTI +QFPDP FK +H KRR++QPELVE I +HL+P G L++ SDVL+V E M + E L DS P+ W+ +NPF V TEREK + +VY
Sbjct: 45 QVRTRQHVNPLSEHMQKPVELEQEWPKNKFESLERSFHVDVGVAKGRFLFDMAEKNPDKNFLGLEIRKPLVDQANNWRDDRNLRNLDFIFCNANVSLDEVLSRLP--AGMLDTISVQFPDPWFKKRHQKRRVLQPELVEVIAKHLKPSGILYVISDVLEVAEQMDEVVSENP-LFRDSTPNA--WIG---ENPFNVLTEREKACINHQRDVHGKVY 252
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: A0A8K2A2R3_9CYAN (tRNA (Guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K2A2R3_9CYAN) HSP 1 Score: 172 bits (437), Expect = 2.240e-48 Identity = 100/221 (45.25%), Postives = 135/221 (61.09%), Query Frame = 1
Query: 4 VKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVK 666
V+ RQHVNPL+A +Q+ P+ + + + PL +DIGCA+G FL++MA+A+PD NFLG+EIR P+ A LG N H + CN+N L ++L + GASI QFPDP FK +H KRR+++PELV + R L+PG LF+QSDVL+V +MR + E D RP W+E QNPF V TERE +T L A VYRC F++
Sbjct: 4 VRVRQHVNPLSAKYQEATAAPD--WAQIYAHRTRPLHLDIGCARGQFLLAMAQAWPDWNFLGVEIREPLVIKANQDRDALGLSNLHYLFCNINPSLRSLLLPQSLQGASI-----QFPDPWFKRRHQKRRVLRPELVADLARCLQPGSLLFLQSDVLEVAAEMRHLVGEHP----DFRPQPHGWLE---QNPFPVPTERETLT----LKAGQPVYRCQFLR 206
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: R1BVT0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BVT0_EMIHU) HSP 1 Score: 174 bits (440), Expect = 8.060e-48 Identity = 107/224 (47.77%), Postives = 133/224 (59.38%), Query Frame = 1
Query: 7 KTRQHVNPLAATFQQPVDLPEGW-FHSAFENPNAPLLVDIGCAKGTFLMSMA-KAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAE-LLEDSRPDMEDWMEGPEQNPFG-VQTEREKVTYGKELPAENRVYRCMFVK 666
K R HVNPL QP+DLPE W AF P+ PL VDIGCA+G F + +A ++ N LGLEIR +A A LG N + CN NV+L+AVL A+R G + ++ IQFPDP FK +H KRR+VQPELVE I RHL PGG LF Q+DVLD+ +D R R+ A L D+R D DW P+ P V TERE+ + P VYR +F K
Sbjct: 57 KIRHHVNPLKDVHMQPLDLPERWPEEGAFTQPDLPLHVDIGCARGLFCLDLAAESSGSANVLGLEIRSALAEAAAEDARRLGVANAAFLPCNANVNLEAVLLRASRCGP-LQSVSIQFPDPWFKARHKKRRVVQPELVETIARHLEPGGWLFFQTDVLDLAQDARDTIRQAAAGTLRDAREDAGDWA-APKPKPLACVSTERERSCAELQRP----VYRAVFEK 274
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: UPI001A8C6F10 (tRNA (guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=Phormidium pseudopriestleyi TaxID=1759527 RepID=UPI001A8C6F10) HSP 1 Score: 169 bits (427), Expect = 8.910e-47 Identity = 105/223 (47.09%), Postives = 135/223 (60.54%), Query Frame = 1
Query: 1 RVKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVKK 669
RV+ RQHVNPL+ +Q P+ +P W + NP PL +DIGCA G FL+ MA PD NFLG+EIR P+ ALA+ E N H + CN+N A L E+ G + + IQFPDP FK +H KRR+VQPELVE + ++L PGG +F+QSDV DV +MR E + R EDW+ PE NP V TERE+ T K+ P VYR +F+KK
Sbjct: 3 RVRVRQHVNPLSYAYQTPI-VPPTW-SQVYTNPAQPLHLDIGCAWGRFLLQMAAIEPDWNFLGIEIREPLVETALAQRDEEKLSNLHFIFCNINHTF-APLIESLPPGI-LHRVSIQFPDPWFKKRHQKRRVVQPELVENVAKYLVPGGMVFLQSDVHDVAIEMRDRFAEHSSF---ERQGGEDWL--PE-NPMPVATEREQSTLDKDEP----VYRVVFLKK 211
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: A0A1U7IZN9_9CYAN (tRNA (guanine-N(7)-)-methyltransferase n=11 Tax=Cyanobacteria TaxID=1117 RepID=A0A1U7IZN9_9CYAN) HSP 1 Score: 168 bits (426), Expect = 1.080e-46 Identity = 98/221 (44.34%), Postives = 134/221 (60.63%), Query Frame = 1
Query: 4 VKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVK 666
V+ RQHVNPL+ +Q PV++P + + F NP PL +DIGCAKG FL+ MA+ P+ NFLGLEIR+P+ A R E N H + CNVN+ L ++L E+ + + + IQFPDP FK +H KRR++QPELV I L GG L +QSDV +V DM E L + DW+ PE +PF QT+RE+VT + LP V+R +F++
Sbjct: 4 VRVRQHVNPLSGKYQAPVEVPN--WSAVFANPQQPLHIDIGCAKGVFLLQMAQLQPEWNFLGLEIRKPVVESAQKRQQEAELTNLHFMYCNVNISLRSLL-ESWGDQNPLQQVSIQFPDPWFKKRHQKRRVLQPELVSTIAEFLPSGGRLVVQSDVEEVAVDMCDRIAENPHFLRQGQ----DWL--PE-SPFPAQTDRERVTLEQGLP----VHRAIFIR 210
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Match: UPI0005603905 (tRNA (guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI0005603905) HSP 1 Score: 168 bits (425), Expect = 1.520e-46 Identity = 97/221 (43.89%), Postives = 131/221 (59.28%), Query Frame = 1
Query: 4 VKTRQHVNPLAATFQQPVDLPEGWFHSAFENPNAPLLVDIGCAKGTFLMSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAVLSEAARNGASIDTICIQFPDPHFKTKHYKRRIVQPELVECIERHLRPGGALFMQSDVLDVLEDMRIITRETAELLEDSRPDMEDWMEGPEQNPFGVQTEREKVTYGKELPAENRVYRCMFVK 666
V+ RQHVNPL+ +Q PV +P+ + AF NP PL +DIGC KG F + MA+ P+ NFLGLEIR+P+ A R E G N H + CNVN+ L A+L E+ + + + IQFPDP FK +H KRR++QPELV + L PGG + +QSDV +V DM E L P + W+ +PF QT+RE+VT + LP VYR +F +
Sbjct: 4 VRVRQHVNPLSERYQAPVAMPD--WSEAFANPQQPLHIDIGCGKGVFALHMAQLQPEWNFLGLEIRKPVVESAQKRQQEAGLSNLHFMYCNVNISLRALL-ESWGDQNPLQQVSIQFPDPWFKKRHQKRRVLQPELVATLAEFLPPGGRVVVQSDVEEVAVDMCDRLSEHPHFL----PQGDRWLPA---SPFPAQTDRERVTLEQGLP----VYRAIFTR 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19383.5381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19383.5381.1 >prot_H-elongata_contig19383.5381.1 ID=prot_H-elongata_contig19383.5381.1|Name=mRNA_H-elongata_contig19383.5381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp MSMAKAYPDQNFLGLEIRRPIAALALARTVELGTRNCHPVCCNVNVDLDAback to top mRNA from alignment at H-elongata_contig19383:2..4813- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19383.5381.1 ID=mRNA_H-elongata_contig19383.5381.1|Name=mRNA_H-elongata_contig19383.5381.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4812bp|location=Sequence derived from alignment at H-elongata_contig19383:2..4813- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19383:2..4813- >mRNA_H-elongata_contig19383.5381.1 ID=mRNA_H-elongata_contig19383.5381.1|Name=mRNA_H-elongata_contig19383.5381.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1086bp|location=Sequence derived from alignment at H-elongata_contig19383:2..4813- (Himanthalia elongata Himel1 dioecious)back to top |