mRNA_H-elongata_contig19266.5333.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 241 bits (615), Expect = 2.310e-73 Identity = 138/337 (40.95%), Postives = 194/337 (57.57%), Query Frame = 1
Query: 139 LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLKFKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFTV----------------------EVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGCTDD 1083
+ VPL R +T R +A AIS KTT RR++E ++PHT +KP L+ K RL + TL F M NVVH+DEK FY+CK + YL E P+R+V+ K ITK MFL AV RPR+ F+G IGI+PFT + KE+ K +I+ VIP I +++P+ + R +QQDNA+PH+ ++ E A S DG+DIRL+ QP SPD N+LDLGFF +IQ Q +++++V AVK+++++ + LNRV+L+ Q C+++IM GDNDYK+PH+ RLE GTLP Q+ C D
Sbjct: 28 IKQVPLNRRSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRL---EFCLSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGM-------RTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESD 348
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 243 bits (620), Expect = 3.160e-73 Identity = 137/336 (40.77%), Postives = 197/336 (58.63%), Query Frame = 1
Query: 145 NVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLK-FKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFT----------------------VEVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGCTDD 1083
++PL+R + R +A ++ K+T RR+KE ++PHT +KP L+ K RL + + + F M NV+H+DEK FY+ K +R YL E+ P R Q K ITKVMFL AV RPR ++S N F+G IGIYPFT + V KE + +I+ V+PDIR+++PR S ++QQDNA+PH+ +D E A S DG+DIRL QP+ SPD N+LDLGFF IQS Q++ L ++D++V AV+ A+ K LN V+L+LQ C+ +I+ V G N+Y++PHI RLE G LP ++GC ++
Sbjct: 94 DIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPR------SHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLRIGCDEN 423
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS) HSP 1 Score: 243 bits (619), Expect = 5.830e-73 Identity = 152/387 (39.28%), Postives = 221/387 (57.11%), Query Frame = 1
Query: 4 YGASRKSMAALWKRYKAEKAAGRPQTDLSCRR----GRRKPDMAPCKETLNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLK-FKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFTVE----------------------VIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGCTDD 1083
+ S K++ +W R KA +A G + D+S ++ GR++ ++ K + + R T R + A+ PK+T +R+KE ++PHT LKP LS KI RL + +T FK M N VH+DEK FY+ K+ +R Y+ E+ P R + K ITKVMFL AV RPR ++ F+G IGI+PFTV+ V K+ + +I+ VIP I+S++ + SS ++QQDNARPH+ +D E A + +G+DIRL NQPA SPD N+LDLGFFN IQS Q + R++D +V AV+++++K L+ V+LSLQAC+ ++M V G N+YKLPHI +L G LP+QL C D
Sbjct: 52 FSVSNKTIHRIWSRAKACEAHG-SKVDVSSKKRRRVGRKRREIDWNK--VRGIAFHRRTNIRSFSEALEVPKSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPMFKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQ-----SSVGETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLECGRD 430
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663) HSP 1 Score: 238 bits (606), Expect = 1.950e-71 Identity = 137/334 (41.02%), Postives = 192/334 (57.49%), Query Frame = 1
Query: 139 LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLKFKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFT----------------------VEVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGC 1074
++ +PL+R R IA AI K+T RR+KE ++PHT +KP L+ K RL T ++L F + NV+H+DEK FY+ K +R YL +E P R + K ITKVMFL AV RPR ++S N F+G IGI+PFT + V KE + +I+ V+P IRS++PR ++QQDNA+PH+ +D E S DG+DIRL QP SPD N+LDLGFF IQS Q++ L S+D++V AVK ++ + + LN V+L+LQ C+++IM V G N+Y+ PHI G+LE G LP + C
Sbjct: 69 VSQIPLRRRKNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARL----EFCLSTVTRSLTFHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIEC 392
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI000B8EED4A (uncharacterized protein LOC110944677 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8EED4A) HSP 1 Score: 234 bits (597), Expect = 2.910e-70 Identity = 135/327 (41.28%), Postives = 192/327 (58.72%), Query Frame = 1
Query: 139 LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRS-TAMTAGKTLKFKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFTVEVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGCTDDACAKGASALAE 1116
++ +PL+R TT R +A AI+ KTT RR+KE +K HT +KP L+ K RL S T + + F M NV+H+DEK FY+ K + YL E+ P R + K ITKVMFL AV RPR++SS N F+G IGI+PFT +R + +H P ++QQDNA+PH+ +D E + S DG+DIRL QP SPD N+L+LGFF IQS Q++ L S+D++V AVK ++ + LN+V+L+LQ C+++IM V G N+YK+PHI G+LE G LP Q+ C ++ + S L++
Sbjct: 92 ISQIPLRRRTTIRSLAKAINVSKTTMHRRIKEGALKAHTNAIKPDLTDENKKTRLVFCLSSVTRSLSNGSPVFHDMFNVIHIDEKWFYLSKPSKGYYLVPDEDEPYRTCKSKKFITKVMFLAAVARPRYDSSGNEVFSGKIGIFPFTTLEPAKRSR----NHTGP-------------------IYIQQDNAKPHIEVNDAEFKLEASKDGFDIRLCFQPPNSPDLNVLNLGFFRAIQSLQEQEVLGSIDELVSAVKSSFERMPSHELNKVFLTLQTCMKEIMKVQGGNNYKIPHIGKGKLERQGNLPLQIECDENLIYEALSYLSQ 395
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 234 bits (598), Expect = 9.850e-70 Identity = 147/385 (38.18%), Postives = 216/385 (56.10%), Query Frame = 1
Query: 4 YGASRKSMAALWKRYKAEKAAGRPQTDLSCRRGRRKPDMAPCKET-LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*A--RRSTAMTAGKTLKFKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFTVEVIKERYKK----------------------MMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGCTDD 1083
+ SRK++ LWK K + G P +G + D E + N+ + + ++ R +A +S KTT +K+ ++PHT +KP L+ K+ RL + ++T GK + F GM N+VH+DEK FY+ K R YL E+ P R + K +ITKVMF+ AV RP+ +S ++G +GI+PFT V +R K +I +IP I++++P +S+E ++QQDNA PH+ +DPE +A ++DG+ I L+ QP SPDTNILDLGFF IQS Q + R+VD++V+ V +A+ + TP LNRV+LSLQACL QI+ GDN YK+PH+ RLE G LP L +D
Sbjct: 45 FSISRKTVYRLWKVAKDQMQQGEPAIMEGKLKGYQHADKLNLDEDKVRNLSILQRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGK-VHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWP----DWASKE--IYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLPNVLEVDED 422
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS) HSP 1 Score: 234 bits (596), Expect = 1.500e-69 Identity = 142/338 (42.01%), Postives = 192/338 (56.80%), Query Frame = 1
Query: 148 VPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLK----FKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFT----------------------VEVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGCTDD 1083
+P + T R IA A+ P+TT RR+K+ ++PHT LKP LS GK RL + +M +L+ FK M N VH+DEK F++ K+ +R YL EN P R + K ITKVMFL AV RPR +++ N F+G IGI+PFT V V KE +K +I+ V+P IR+++PR + E I +QQDNARPH+ D E S DG+DIRL QP SPD N+LDLGFF IQS Q + +++D++V V A+ + +P L+ V+L+LQAC+ +IM V G YK+PHI G L LP QL C D
Sbjct: 100 LPYSQRTNIRSIAEALEVPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARL---QFCLSMLEPSSLQSQPTFKNMYNYVHIDEKWFFMTKESERYYLLPHENEPLRTCKSKHFITKVMFLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKRTSKNRVAGTLETKVVVSVTKEIIRKCLIEKVLPAIRAKWPR----GNGIETIL-IQQDNARPHIREFDAEFLEEASKDGFDIRLSFQPPNSPDLNVLDLGFFRAIQSLQYQKAPKNIDELVSVVVSAFEELSPQTLDNVFLTLQACMIEIMKVNGGIGYKVPHIGKGGLMRDDNLPTQLQCDHD 429
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI001CB8D7AC (uncharacterized protein LOC122583467 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D7AC) HSP 1 Score: 236 bits (603), Expect = 7.300e-69 Identity = 138/334 (41.32%), Postives = 191/334 (57.19%), Query Frame = 1
Query: 139 LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLKFKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFT----------------------VEVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGC 1074
++ +PL+R T R IA AI K+T RR+KE ++PHT +KP L+ K RL T ++L F M NV+H+DEK FY+ K +R YL +E P R + K ITKVMFL AV RPR ++S N F+G IGI+PFT + V KE + + + V+P IRS++PR ++QQDNA+PH+ +D E S DG+DIRL QP SPD N+LDLGFF IQS Q++ L S D++V AVK ++ + + LN V+L+LQ C+++IM V G N+Y+ PHI G+LE G LP + C
Sbjct: 272 VSQIPLRRRTNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARL----EFCLSTVTRSLTFHDMFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLNEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNEEASKDGFDIRLCFQPPNSPDLNVLDLGFFRVIQSLQEQEVLGSNDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIEC 595
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3) HSP 1 Score: 231 bits (590), Expect = 9.520e-69 Identity = 130/336 (38.69%), Postives = 192/336 (57.14%), Query Frame = 1
Query: 139 LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTA--GKTLKFKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFT----------------------VEVIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGC 1074
++ +PL+ + R +A +++ K+T RR+KE ++PHT +KP L+ + RL +++ F M NVVH+DEK FY+ K +R YL ++ P R + K ITK+MFL AV RPR++SS N F+G IGIYPFT + V KE + +I+ V+PDIR+++PR ++QQDNA+PH+ D E A S DG+DIRL QP SPD N+LDLGFF IQS Q++ L + D++V AV+ ++ + LN V+L+LQ C+++I+ V G N+Y +PHI RL+ G LP Q+ C
Sbjct: 92 VSEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSPIPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGP------IFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQGNLPLQIEC 421
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS) HSP 1 Score: 231 bits (590), Expect = 1.090e-68 Identity = 138/338 (40.83%), Postives = 195/338 (57.69%), Query Frame = 1
Query: 139 LNNVPLKRHTTQRGIAAAISRPKTTFRRRMKELWVKPHTRFLKPILSTAGKIDRLT*ARRSTAMTAGKTLK----FKGMGNVVHVDEKTFYICKDKQR*YLFDSENPPSRKVQRKSHITKVMFLEAVGRPRHNSSTNSHFNGNIGIYPFTVE----------------------VIKERYKKMMIDHVIPDIRSRFPRPLASASSEERICWVQQDNARPHLINSDPEIRAAMSADGWDIRLVNQPAISPDTNILDLGFFNTIQSRQDRTTLRSVDDVVKAVKEAWNKDTPDVLNRVWLSLQACLEQIMLVGGDNDYKLPHICNGRLENAGTLPWQLGC 1074
++ VPL+R T+ R +A A++ P+TT RR+KE ++PHT +KP L+ GK RL R +M +L FK M N VH+DEK F++ ++ +R YL E P R + K ITKVMFL AV RPR ++ N F+G IGI+PFT + V KE + +ID V+P IR+++P S E I ++QQDNA+PH+ D E A DG+DIRL QP SPD N+LDL +FN+IQS Q + ++D++V AV++++ P LN ++LSLQAC+ +IM V G N YK PH+ +L +G LP L C
Sbjct: 97 VSEVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARL---RFCFSMLEPSSLANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPH----YDSTETI-FIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGGNHYKQPHLGKNKLMRSGNLPTHLSC 426 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19266.5333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19266.5333.1 >prot_H-elongata_contig19266.5333.1 ID=prot_H-elongata_contig19266.5333.1|Name=mRNA_H-elongata_contig19266.5333.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp MFLEAVGRPRHNSSTNSHFNGNIGIYPFTVEVIKERYKKMMIDHVIPDIRback to top mRNA from alignment at H-elongata_contig19266:5654..6769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19266.5333.1 ID=mRNA_H-elongata_contig19266.5333.1|Name=mRNA_H-elongata_contig19266.5333.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1116bp|location=Sequence derived from alignment at H-elongata_contig19266:5654..6769+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19266:5654..6769+ >mRNA_H-elongata_contig19266.5333.1 ID=mRNA_H-elongata_contig19266.5333.1|Name=mRNA_H-elongata_contig19266.5333.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1254bp|location=Sequence derived from alignment at H-elongata_contig19266:5654..6769+ (Himanthalia elongata Himel1 dioecious)back to top |