mRNA_H-elongata_contig18648.5077.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: D8LLL2_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL2_ECTSI) HSP 1 Score: 668 bits (1724), Expect = 1.320e-237 Identity = 332/427 (77.75%), Postives = 367/427 (85.95%), Query Frame = 1
Query: 1 QWKRDYGGKKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIWKRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
+WKRDYGGKK KN ASRPLAFDCCALSLAPFETPVCTK GV+FD+LNIMPYV+KHKKNPVTGEALT KD++RLNISKN++GKWHCPV FN+NSRILAI++SGNVF+AEA+EELNYKAKSWNDLLTGE F K+DVIKLNDP DKE VASRD NNFVHL EVRE+RVAELA+V HAD+IRQTK+TELI E+ AKRKRDAAEKA KD +AAGER+WKRGKV T+DLV GR+MTSGKTSGS TSS L VSTE+ ARLATD+EIN+ RW RLR+LGKKGYCQLQTTKGNINVEIHCD+VPRMAENF+GLC +EYYDGTKFHRSIRNFMLQGGDPT G+GGES+WGGKI+DEFESRMTHDKRGVLSMAN+G +T GSQFFITYKSCKHLDNQHSVFGRVVG
Sbjct: 17 EWKRDYGGKKADKNGASRPLAFDCCALSLAPFETPVCTKEGVIFDILNIMPYVRKHKKNPVTGEALTPKDLVRLNISKNADGKWHCPVTFKVFNDNSRILAIKSSGNVFAAEAVEELNYKAKSWNDLLTGEEFTKRDVIKLNDPGDKEFVASRDVNNFVHLS-------------EVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQGGDPTGSGRGGESYWGGKIKDEFESRMTHDKRGVLSMANSGPDTTGSQFFITYKSCKHLDNQHSVFGRVVG 430
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A836CDG8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG8_9STRA) HSP 1 Score: 489 bits (1258), Expect = 4.680e-168 Identity = 254/427 (59.48%), Postives = 316/427 (74.00%), Query Frame = 1
Query: 1 QWKRDYGGKKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIWKRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
+W RDYGGKK N RPL+FDCCA+SL PFETPVCTK GV+FD+LN+MPYVKKHKKNPVTGE L KD+I+L+ +KN+EGKWHCPV FN+NSRI+AIRT+GNV++AEA+EELN K K++ DLLTGE F + D+IKLNDP+D+ L A RD NNF HL+ E+RE + H +IRQT TT+ I E+ KR+ D ++ XXXXXXXXX AVAAG +WKR +V +D+ EG +T+ +GS TS+ VST +R AT EEI+ R+SRLR L KKGY QLQT+ GNIN+E+H D+VP+ AENF+GLC + YYDGT FHRSIR+F++QGGDPT G GGES WG K RDEF+ R++HDKRG+L+MAN+G +TN SQF+ITYKSCKHLD +HSVFG VVG
Sbjct: 17 EWSRDYGGKKGAVNSGIRPLSFDCCAMSLGPFETPVCTKEGVVFDILNVMPYVKKHKKNPVTGEPLKNKDLIQLHFAKNNEGKWHCPVTFKVFNDNSRIVAIRTTGNVYAAEAVEELNLKTKNFEDLLTGEPFQRADIIKLNDPADEALCALRDANNFKHLK-------------ELREAEAKRQEQASHTSKIRQTLTTQQIFKEIEEKRQSDERDRTXXXXXXXXXXXXKDAEAVAAGAPLWKRLRVLLEDISEGTHVTTNVMAGSFTSTAQQVSTTAQSREATPEEIDRARFSRLRALKKKGYVQLQTSHGNINIEVHVDMVPKTAENFLGLCEKGYYDGTIFHRSIRHFVIQGGDPTGTGTGGESIWGEKFRDEFDERLSHDKRGILAMANSGPHTNASQFYITYKSCKHLDRKHSVFGSVVG 430
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: W7T7R4_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7R4_9STRA) HSP 1 Score: 394 bits (1012), Expect = 1.450e-128 Identity = 213/451 (47.23%), Postives = 296/451 (65.63%), Query Frame = 1
Query: 1 QWKRDYGGKKTGKNVAS-RPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERI---------WKRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFW---GGK-----------IRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
+WK + GGK+ +S RPLAFD CALSL P+ETPVCT GV+FD+LN+ PYV+KHKKNP+TG ++T K+I+RL ++KN+EGKWHCPV F +++ ++A++ SGNV++ EA+EELN + K+W DL+TGE+F ++D+I L DPS+ +A RD +NF HL+ A + A EK A IR +TE++L E +++ +A++ XX XX + +R + +DL G+ +T+GK + S T++ + ++T N+ R AT+EE E R+ R+LGKKGY QLQT+ GN+N+EIHCD VPR AENF+GLC R +YDG FHR I+ FM Q G P G+GGE+ W GG+ +DEF+SR+THDKRGVLSMAN+G +TN SQFFIT+KSC+HLDN+H+VFGRVVG
Sbjct: 17 EWK-ELGGKREAAGRSSYRPLAFDSCALSLQPYETPVCTPEGVLFDILNLFPYVQKHKKNPITGHSMTAKEIVRLTMAKNAEGKWHCPVTFKEFTDHTHVVAVKPSGNVYAYEAVEELNIRRKNWTDLMTGESFTRKDIITLQDPSNAAHMALRDISNFKHLEEVRAEEQARVAGASAEEK---------IASSIRTNASTEMVLAEFQRQQRERXXXEALRAAQAEAXXVEREXXXAXXXXXLRXXXXXXXXXRRRSILIEDLHPGKSVTTGKAAASFTATGVDLATGNTCRTATEEETREVRYKFARKLGKKGYVQLQTSLGNLNLEIHCDFVPRTAENFLGLCLRGFYDGLSFHRVIKGFMAQTGCPRGDGRGGETVWSLGGGREEGKEGGATMGFKDEFDSRLTHDKRGVLSMANSGKDTNRSQFFITFKSCRHLDNKHTVFGRVVG 457
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A7S3HQ04_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQ04_9STRA) HSP 1 Score: 370 bits (949), Expect = 5.830e-121 Identity = 203/438 (46.35%), Postives = 278/438 (63.47%), Query Frame = 1
Query: 1 QWKRDYGGKKTGKNVASRPLAFDCCALSLAPFETPVCT--KGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCP----VFNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKR--------KRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIWKRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGK-IRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
+W ++YGGKKT + ASRPL FD CALSL PF TPV GV+FD I+PY+++HK +PV+G+A+TTKDIIRL+++KN+ G+W CP VF N+S ++AI +SGNV+S A+ ELN K+K++ DL++GE F K DV+ L DP + E +A RD NNF HL+ T ++ + RE +IRQ+ +T ++ E+ ++R KR E+ + + A+ A T D+ G+V T G+ S SLTS+ + T N+ R AT EEI E RW +R++GKKGY QLQTT GN+NVEIHCD+ PR A NF+ LC R Y+D HR + FM+Q GDPT G GG S +GG+ RDEF++R+ HD +GVLSMAN+G N+NGSQFF+ + KHLD +H+VFGRVVG
Sbjct: 7 EWSQEYGGKKTTREAASRPLPFDHCALSLTPFRTPVLLGKNSGVIFDFEVIVPYLQEHKCDPVSGDAMTTKDIIRLHMTKNAAGEWECPITNKVFTNSSHVVAIASSGNVYSFGAVNELNIKSKNFTDLISGEPFKKSDVLTLQDPQNAEQMAKRDINNFSHLK------TVREESSKTREGE----------SKIRQSLSTSNVMKEIESQRQLEKESGVKRKTLEEIISNKSTEDNSDVERFLALQA----------LTLDVTPGQVSTDGRASSSLTSTSSNLWTSNATRRATAEEIREARWKIMRQVGKKGYAQLQTTHGNLNVEIHCDIAPRTAWNFLTLCERGYFDDMTLHRLVPGFMVQAGDPTGTGAGGSSAFGGRPFRDEFDTRILHDAKGVLSMANSGMNSNGSQFFMLFAPAKHLDLKHAVFGRVVG 418
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A7R9YCF3_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCF3_9STRA) HSP 1 Score: 371 bits (952), Expect = 2.450e-120 Identity = 209/436 (47.94%), Postives = 286/436 (65.60%), Query Frame = 1
Query: 1 QWKRDYGGKKTGKNVASR--PLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKRKRDAAEKAVKDXXXXXXXXXXXXX-------AVAAGERIWKRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
+W+RD+GG+ ++ + L FDCCAL+L P+E PVCT GV+FD+L I+PY+KKHKK+P+TGEA+ K ++RLN+ KN+EGKWHCPV F +SR++AIRTSGNVFS +A+EELN K K++ DL+TG+AF++ D+I L DPS+ EL+ RD ++F HL+ E+R++ A+ + + + K + + + + K+ XXXXXXXXX A GE ++ + T D+ G TSG +LTSS ++VST + R A+D+EI + +RRLGKKG QLQTT GN+N+EIH D+VP + NF+GLC + YY+GT FHR I FM QGGDP G GG+S WGG RDEF+ R+ H+ GVLSMAN+G ++NGSQFFIT+K HLDN+HSVFGRVVG
Sbjct: 17 EWRRDHGGRAVERSRGPKYEALPFDCCALTLTPYEDPVCTPDGVLFDLLAIVPYLKKHKKSPITGEAMKPKQLLRLNMQKNAEGKWHCPVTYKPFGPHSRVVAIRTSGNVFSYDAVEELNLKPKNFVDLVTGQAFLRSDIIWLQDPSNPELMRRRDISSFKHLE-------------ELRQEEAAKRKADVNRNVSKAVKASRAVAQQARSTVKQKXXXXXXXXXXXXXXXXXGADVTQGGPALADLKGELQERQVTLTTSDVTPGSRKTSGAAGRALTSSAVSVSTAGAEREASDDEIVTAIHAEMRRLGKKGLVQLQTTLGNLNLEIHADMVPATSHNFLGLCKKGYYNGTIFHRVIPGFMAQGGDPKGTGTGGKSVWGGHFRDEFDLRLRHNCAGVLSMANSGPHSNGSQFFITFKETPHLDNKHSVFGRVVG 439
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: F0Y5H9_AURAN (RING-type E3 ubiquitin transferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5H9_AURAN) HSP 1 Score: 366 bits (939), Expect = 1.840e-118 Identity = 207/458 (45.20%), Postives = 274/458 (59.83%), Query Frame = 1
Query: 10 RDYGG---KKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVS--------AKRKRDAAEKAVKDXXXXXXXXXXXXX----AVAAGERI------WKRGK-------------VCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
RD GG K+ GK S P F+CCALSL PFE+P C + GV+FD L ++P+VK+ K+PVTG +L KD++RL ++KN +G WHCPV FNN ++++A+ T+GNVFS EA+ EL K DLL G F K D++ ++DP D L A RD NF HL+ E RE R A LA D IR + ++ +L E A+ ++AA +A K A A +R+ R K TD++++G +TSG TSGS TSS L+V T R AT++E+ RW RLR LGKKGY QL+T+ GN+NVEIH D+VPR AENF+GLC + YYDG+ FHR +R+F+ Q GDPT G GGES WG + DEF+SR+ H +RGVL+ AN G N N SQF++T KS HLDN+H+VFG+VVG
Sbjct: 20 RDGGGYKKKREGKLEGSLP--FECCALSLLPFESPCCARDGVLFDALQLLPFVKERGKSPVTGASLKVKDVLRLRMAKNGDGHWHCPVTCKAFNNFTKVVAVATTGNVFSYEAVRELCLKRGQLADLLDGTPFAKADLVMIHDPEDAALCARRDLANFAHLR-------------EEREAREARLATSRPEDHIRTSDSSRAVLDEAKRNVAAAEEARSAKEAANRAAKGGNRPRYEPLKLGISHPFAAQAAKRLADADPDLPRNKGLTEAFLRVRTLGATTDEILKGSKLTSGATSGSFTSSALSVETSAKLRDATEDELKTARWKRLRGLGKKGYAQLRTSHGNLNVEIHADMVPRAAENFLGLCAKGYYDGSPFHRVVRHFVAQAGDPTGAGTGGESLWGARFDDEFDSRLLHSERGVLAYANDGLNRNRSQFYVTLKSATHLDNKHTVFGKVVG 462
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A024UND7_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UND7_9STRA) HSP 1 Score: 364 bits (934), Expect = 7.740e-118 Identity = 199/428 (46.50%), Postives = 274/428 (64.02%), Query Frame = 1
Query: 16 YGGKKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCP----VFNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSA----KRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIW--KRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
YGGKK A R L FDCCA++L PF+ PVCT+ G +FD+ ++PYVK+H NPVTGE LT KD+IRL+ KN EG++ CP VF N+++I A+ TSGNV++ +A+EELN K+K+W+DL+TGE F ++D+I L DP+D + +R+ ++F H + + T+Q ++ + H IR + T I E+ A KRKR+ K K +A K GK+ + T GK S S TS+++ ST + A LAT+ E+ ETRW+ +++L KKGY +L T G IN+E+ CD VPR +NF+GLC + YY+G FHR IR FM+QGGDP+ G+GGES WG +DEF+SR+ H KRGVLSMAN+G+NTN SQFFIT+K+C +LDN+HSVFGRVVG
Sbjct: 22 YGGKKDAVKTAYRRLPFDCCAITLTPFKNPVCTRQGHLFDIEAVIPYVKEHGINPVTGETLTVKDLIRLHFHKNPEGEYACPITYRVFTNSTKIAAVATSGNVYAFDALEELNIKSKNWHDLMTGEEFKRKDIIILQDPAD---LGNREIDSFEHFRRAKENEKTKQ-----------DVGKQEHQT-IRVSSATARIFQEMEAAKALKRKREEELKQDKTKQTEEERIAASVSHASADTTPTPGKNGKL------QYSKFTDGKMSQSFTSTMMDPSTRSQAALATEAEVLETRWANVKKLKKKGYVRLVTNFGAINLELDCDFVPRTCDNFLGLCAKGYYNGVIFHRIIRGFMMQGGDPSGTGQGGESIWGAPFKDEFDSRLLHSKRGVLSMANSGSNTNNSQFFITFKACHYLDNKHSVFGRVVG 428
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A1V9YR90_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR90_9STRA) HSP 1 Score: 362 bits (930), Expect = 2.510e-117 Identity = 191/423 (45.15%), Postives = 269/423 (63.59%), Query Frame = 1
Query: 16 YGGKKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEV-SAKRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIWKRGKVCTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
YGGKK A R L FDCC+++L PFE PVC++ G +FD+ ++PYVK+H NPVTG L KD+I+L KN++G++ CPV F N+++I A+ TSGNV++ EA+EELN K K+W DL++GEAF ++D+I L DP+D ++ R+ NF H + + T P+ + IR T T IL E+ +AK+++ E+ ++ AV+ + ++ T+G+ S S TS+ + +T N+ +A++EE ETRW+ +R+L KKGY +L TT G +N+E+ CD+VPR +NF+GLC + YYD +FHR IR FM+QGGDPT G+GGES WG RDEF+SR+ H RGVLSMAN+G NTNGSQFFIT+K C +LDN+HSVFGRVVG
Sbjct: 22 YGGKKEEIRRAYRRLPFDCCSITLKPFENPVCSREGHLFDIEAVIPYVKEHNMNPVTGTPLAVKDLIKLRFHKNAQGEYFCPVTYKVFTNSTKIAAVATSGNVYAYEALEELNIKPKNWTDLVSGEAFKRKDIIVLQDPTD---LSGREIENFEHFRKAKEAETKANPTPDAQSN-------------IRVTSATSRILQEMEAAKQRKRQREEEIRRGEAERTAQEKIIAAVSHSTKPAAPTPADGASKLQYSKFTAGECSRSFTSTEMDPTTRNAPAVASEEEQLETRWTEVRKLKKKGYVRLTTTMGVLNLELDCDMVPRTCDNFLGLCEKGYYDNVEFHRIIRGFMMQGGDPTGTGRGGESVWGKAFRDEFDSRLRHTDRGVLSMANSGTNTNGSQFFITFKECTYLDNKHSVFGRVVG 428
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A7S4A007_9STRA (RING-type E3 ubiquitin transferase (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A007_9STRA) HSP 1 Score: 363 bits (932), Expect = 2.770e-117 Identity = 196/434 (45.16%), Postives = 269/434 (61.98%), Query Frame = 1
Query: 16 YGGKKTGKNVA-SRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIWKRGKV-----------CTDDLVEGRVMTSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
YGG K K + + L FDCCALSL PF++PVC + G++FD L ++PYV++ +P TG+ L KD++RL ++KN + +WHCPV F N+S+++ I T+GNVFS +A++EL +K DLL F K+DVI L+DP DK+LV+ RD NF HLQ E R+KR AEL +QT + +L E + A++ K+ A+ A +R RG TD++ G +TSG TSGS TSS + ST + R ATD+E+ RW LR LG+KGY +++T+ G++NVEIHCD+VPR AENF+GLC YD T FHR +R+F+ QGGDPT G+GG+S WG DEF+SR+TH +RGVL+ AN G + N QF++T+KSC HLDN+H+VFGRVVG
Sbjct: 117 YGGYKKKKTIGLTGALPFDCCALSLLPFDSPVCARDGILFDALQLLPYVQEKGVSPATGKKLAVKDVLRLKMAKNQDNQWHCPVTCKVFTNHSKVVCIATTGNVFSKDAVKELCFKRNCLEDLLDATPFRKEDVISLHDPDDKDLVSRRDLANFWHLQ-------------EERKKRDAELG---SKGSFKQTDAQKEVLAEAKRNVQEREAQRLAKEKARQE--------ALNAPDRPENRGLTEAYLRVRQLGATTDEVTPGSKLTSGATSGSFTSSAMDRSTTAALRAATDDELKTARWKVLRSLGQKGYARIRTSLGDLNVEIHCDMVPRAAENFLGLCRDGKYDETLFHRVVRHFVAQGGDPTGTGRGGDSLWGAPFADEFDSRLTHSERGVLAYANDGRDRNKQQFYVTFKSCGHLDNKHTVFGRVVG 526
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Match: A0A225VZD8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZD8_9STRA) HSP 1 Score: 357 bits (915), Expect = 6.020e-115 Identity = 196/427 (45.90%), Postives = 271/427 (63.47%), Query Frame = 1
Query: 16 YGGKKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMPYVKKHKKNPVTGEALTTKDIIRLNISKNSEGKWHCPV----FNNNSRILAIRTSGNVFSAEAIEELNYKAKSWNDLLTGEAFIKQDVIKLNDPSDKELVASRDCNNFVHLQASAAPFTTQQALPEVREKRVAELARVPHADRIRQTKTTELILGEVSAKRKRDAAEKAVKDXXXXXXXXXXXXXAVAAGERIWKRGKVCTDDLVE-GRVM----TSGKTSGSLTSSVLTVSTENSARLATDEEINETRWSRLRRLGKKGYCQLQTTKGNINVEIHCDVVPRMAENFMGLCGREYYDGTKFHRSIRNFMLQGGDPTDMGKGGESFWGGKIRDEFESRMTHDKRGVLSMANAGANTNGSQFFITYKSCKHLDNQHSVFGRVVG 1269
YGGKK A + L F+CCA++L PF TPVCT+ G +FD+ ++P+VK+H+ NPVTG+ L K++I+L+ SKNS+G++ CPV F +N++I AI T+GNVF EAIEELN K K+W DLL+G F ++D+I L DP D ++R+ +NF HL+ + A +E R + IR T+ IL E+ AKR AA+K + + + A K + T+ E G++ T+G+ S S TSSV T+N+ LA+++E+ E RW +R+L KKG +L+TT GNIN+E+ CD VP+ A+NFM LC ++YYD FHR I+ FM+QGGDPT G+GGES W RDE +SR++HD RGVLSMAN+G TN SQFFIT+K C HLD +H+VFGRVVG
Sbjct: 22 YGGKKQEIRRAYKRLPFNCCAITLCPFTTPVCTREGHLFDLEAVVPHVKEHQINPVTGQPLALKELIQLHFSKNSQGEYFCPVTYKVFTDNTKIAAIATTGNVFCYEAIEELNIKPKNWTDLLSGTKFKRKDIIVLQDPQD---FSNREIDNFEHLRRAKA----------------SENVRGGSSRNIRTNAATDRILQELDAKR---AAQKELAEKIKRGADDVSEKDKIVASLTHSKEDEAATNKSAESGKLQYSQFTAGECSSSFTSSVRAPVTKNAMALASEQELLERRWQAVRKLKKKGLVRLETTVGNINLEVDCDFVPQTADNFMSLCQKKYYDNVLFHRVIKGFMMQGGDPTGTGRGGESIWKKPFRDEIDSRLSHDTRGVLSMANSGPRTNNSQFFITFKPCPHLDKKHAVFGRVVG 426 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18648.5077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18648.5077.1 >prot_H-elongata_contig18648.5077.1 ID=prot_H-elongata_contig18648.5077.1|Name=mRNA_H-elongata_contig18648.5077.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=424bp QWKRDYGGKKTGKNVASRPLAFDCCALSLAPFETPVCTKGGVMFDMLNIMback to top mRNA from alignment at H-elongata_contig18648:7..6889- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18648.5077.1 ID=mRNA_H-elongata_contig18648.5077.1|Name=mRNA_H-elongata_contig18648.5077.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6883bp|location=Sequence derived from alignment at H-elongata_contig18648:7..6889- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18648:7..6889- >mRNA_H-elongata_contig18648.5077.1 ID=mRNA_H-elongata_contig18648.5077.1|Name=mRNA_H-elongata_contig18648.5077.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2544bp|location=Sequence derived from alignment at H-elongata_contig18648:7..6889- (Himanthalia elongata Himel1 dioecious)back to top |