mRNA_H-elongata_contig18570.5029.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18570.5029.1
Unique NamemRNA_H-elongata_contig18570.5029.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: D7FT75_ECTSI (Vacuolar protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT75_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 8.780e-45
Identity = 257/324 (79.32%), Postives = 265/324 (81.79%), Query Frame = 1
Query:    4 FTLARSLDVASQRYSTLALCNLSSGEHKARIVGEGAVRPLTFLARFXXXXXXXXXXXXXXXXXXXXXGNPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTKAAVMHEDGLPPLLALVNSSDDGDCARTAVYALGSLCESDEVKARLVELGAIESVVHRSSLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            F LARSLDVASQRYSTLALCNLSSGEHKAR                XXXXXXXXXXXXXXXXXXXXXG P NKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX STK AVMHEDGL PLL LVNS DDGDC RTAVYALGSLCESD VKARL+ELGA+ +VV ++S GDIEV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MMAVEAEPRH                            LRLGRARSTD+E+QYKAALTVGHLASNAVK+L
Sbjct: 3417 FQLARSLDVASQRYSTLALCNLSSGEHKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKTAVMHEDGLFPLLELVNS-DDGDCVRTAVYALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLL 3739          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A7S2A1K7_9STRA (Vacuolar protein 8 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A1K7_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.050e-37
Identity = 151/209 (72.25%), Postives = 174/209 (83.25%), Query Frame = 1
Query:  349 KAAVMHEDGLPPLLALVNSSDDGDCARTAVYALGSLCESDEVKARLVELGAIESVVHRSSLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            K  V  E G   +L+L++S+D+ +C  + +Y LGSL E+DE++  LVE+G+I+ +V +  LG IE+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MMA  AE +HYAG+ALLKLADNFENHI IAEEGGIQALLRLGR+R TD+EVQYKAALTVGHLA+NAV  L
Sbjct:   19 KMRVFRETGSKSILSLISSNDE-ECVHSGIYMLGSLAENDEIRGTLVEIGSIKWLVDKFKLGPIEIKRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMATNAESKHYAGMALLKLADNFENHITIAEEGGIQALLRLGRSRVTDEEVQYKAALTVGHLATNAVNQL 226          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A482RX95_9ARCH (Vacuolar protein 8 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX95_9ARCH)

HSP 1 Score: 139 bits (349), Expect = 9.610e-33
Identity = 202/327 (61.77%), Postives = 232/327 (70.95%), Query Frame = 1
Query:    1 LFTLARSLDVASQRYSTLALCNLSSGEHKARIVGEGAVRPLTFLARFXXXXXXXXXXXXXXXXXXXXXGNPS-NKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTKAAVMHEDGLPPLLALVNSSDDG-DCARTAVYALGSLCESDEVKARLVELGAIESVVHRSSLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            +  LA+SLD ASQRY+TL LCNL + + K  ++ +G +RPL FL  F                     G  S +K    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  ++     G D    AVY LGS+CE ++VK R V+   I+ VV   S GD+E+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        M++ +AEP+HYAGLALLKLADNFENH+RIAEEGGIQALLRLGR R+TDD++QYKAALT+G LA+NAVK+L
Sbjct: 1508 ILNLAKSLDSASQRYATLTLCNLCASQMKGLLLEQGVLRPLIFLMHFPDPEIQRYASLALAGVAL---GTKSVSKVQIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNILQREHLGRDLLHAAVYCLGSICEHEDVKMRFVDSHGIQLVVRHLSTGDMEMKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVRPLVTMLSSDAEPKHYAGLALLKLADNFENHLRIAEEGGIQALLRLGRTRTTDDQLQYKAALTLGQLATNAVKLL 1831          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A7S4T4K8_9STRA (Vacuolar protein 8 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T4K8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.800e-32
Identity = 224/325 (68.92%), Postives = 252/325 (77.54%), Query Frame = 1
Query:    1 LFTLARSLDVASQRYSTLALCNLSSGEHKARIVGEGAVRPLTFLARFXXXXXXXXXXXXXXXXXXXXXGNPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTKAAVMHEDGLPPLLALVNSSDDGDCARTAVYALGSLCESDEVKARLVELGAIESVVHRSSLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            LF L+RS D+A+QR ++LALCNLSS   K +++ EG           XXXXXXXXXXXXXXXXX    GN +NKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     S+D+ +C  + +Y LGSL E+DE++  LVE+G+I+ +V +  LG IE+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MMA  AE +HYAG+ALLKLADNFENHI IAEEGGIQALLRLGR+R TD+EVQYKAALTVGHLA+NAV  L
Sbjct:  632 LFKLSRSSDIATQRRASLALCNLSSNGDKLKLLEEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXLG--GNITNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDE-ECVHSGIYMLGSLAENDEIRGALVEIGSIKWLVDKFKLGPIEIKRAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMATNAESKHYAGMALLKLADNFENHITIAEEGGIQALLRLGRSRVTDEEVQYKAALTVGHLATNAVNQL 953          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A7S2XVB4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVB4_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.180e-31
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 1
Query:  781 AEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            A PRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTD+E+QYKAALTVGHLASNAVKML
Sbjct:    3 AVPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDEELQYKAALTVGHLASNAVKML 67          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A7S2WWV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWV0_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.540e-31
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 1
Query:  766 MMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            MMAV+AEPRHYAGLALLKLADNFENH+ IA+EGGIQALLRLGR R+TDDE+QYKAALTVG+LASNAV M+
Sbjct:   43 MMAVQAEPRHYAGLALLKLADNFENHVAIAKEGGIQALLRLGRTRTTDDELQYKAALTVGNLASNAVAMM 112          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A7S3NHP7_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHP7_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.710e-31
Identity = 118/212 (55.66%), Postives = 141/212 (66.51%), Query Frame = 1
Query:  343 STKAAVMHEDGLPPLLALVNSSDDGDCARTAVYALGSLCESDEVKARLVELGAIESVVHRS-SLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            +T   +  E GLP L +L++   D DC   +VYA+GSL E++E+K +LVEL  I++VV  S S  D+E+                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX M V+A P HYAGLALLKLA+NFENH+ IA+EGGIQALLRLGR RSTD E+QYKAALTV +LASN V ++
Sbjct:  192 ATMLGIAREHGLPALFSLLDPKQDNDCHFASVYAMGSLAENNEIKQQLVELDTIQTVVKSSTSRSDLELKRAAAYLFARLAENAELHLKLYENGAVDALVALASLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTVKAAPAHYAGLALLKLANNFENHVAIAQEGGIQALLRLGRERSTDHELQYKAALTVVNLASNVVNLM 403          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A7S2HQA5_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQA5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.250e-28
Identity = 57/70 (81.43%), Postives = 65/70 (92.86%), Query Frame = 1
Query:  766 MMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            +MAV AEPRHYAGLALLKLADNF NH+ IA+EGGIQALLRLGR R+TDDE+QYKAALTVG+LASNA K++
Sbjct:   82 LMAVHAEPRHYAGLALLKLADNFSNHVAIAKEGGIQALLRLGRTRTTDDELQYKAALTVGNLASNAAKLM 151          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A8J2SEI2_9STRA (Vacuolar protein 8 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEI2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.270e-28
Identity = 224/320 (70.00%), Postives = 249/320 (77.81%), Query Frame = 1
Query:   16 RSLDVASQRYSTLALCNLSSGEHKARIVGEGAVRPLTFLARFXXXXXXXXXXXXXXXXXXXXXGNPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTKAAVMHEDGLPPLLALVNSSDDGDCARTAVYALGSLCESDEVKARLVELGAIESVVHRSSLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            RSLDVA QRY+TL+LCN+S GEHK                  XXXXXXXXXXXXXXXXXXXXX   +NK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  L+ S D+ +C     Y LGSL E  EV+A+LV+LG+I ++V      ++E+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MM+++AEPRHYAGLALLKLADNFENH+ IA+EGGIQALLRLGR R+TD+E+QYKAALTVG LASNAVKM+
Sbjct: 3448 RSLDVACQRYATLSLCNVSCGEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--TNKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKSHDE-ECVFAGTYILGSLAEDAEVQAQLVDLGSIPALVAVVGDANLEIKRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMSIQAEPRHYAGLALLKLADNFENHVAIAQEGGIQALLRLGRERTTDEELQYKAALTVGTLASNAVKMM 3764          
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Match: A0A835Z6R1_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 4.270e-28
Identity = 217/327 (66.36%), Postives = 239/327 (73.09%), Query Frame = 1
Query:    1 LFTLARSLDVASQRYSTLALCNLSSGEH--KARIVGEGAVRPLTFLARFXXXXXXXXXXXXXXXXXXXXXGNPSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTKAAVMHEDGLPPLLALVNSSDDGDCARTAVYALGSLCESDEVKARLVELGAIESVVHRSSLGDIEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRARSTDDEVQYKAALTVGHLASNAVKML 975
            LF LARSLDV++QRY+TLALCNL++G    K R+V EG           XXXXXXXXXXXXXX       G  SN+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +TK AVM ED                             E+DEV ARLVELG +      ++ G +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     MM+  AEPRHYAGLALLKLADNF NH+ IA EGGIQALLRLGR+R TD+E+QYKAAL+VGH+ASNAV++L
Sbjct: 3653 LFHLARSLDVSTQRYATLALCNLAAGPARLKLRVVAEGXXXXXXXXXXXXXXXXXXXXXXXXXGLSSSTVGGVSNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTEPATKTAVMVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EADEVLARLVELGIVALAAAHAAAGPMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLVSMMSTAAEPRHYAGLALLKLADNFNNHLAIANEGGIQALLRLGRSRETDEELQYKAALSVGHMASNAVRLL 3978          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18570.5029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT75_ECTSI8.780e-4579.32Vacuolar protein 8 n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A7S2A1K7_9STRA6.050e-3772.25Vacuolar protein 8 n=1 Tax=Ditylum brightwellii Ta... [more]
A0A482RX95_9ARCH9.610e-3361.77Vacuolar protein 8 (Fragment) n=1 Tax=archaeon Tax... [more]
A0A7S4T4K8_9STRA2.800e-3268.92Vacuolar protein 8 n=1 Tax=Ditylum brightwellii Ta... [more]
A0A7S2XVB4_9STRA1.180e-3195.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WWV0_9STRA2.540e-3185.71Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3NHP7_9STRA4.710e-3155.66Vacuolar protein 8 (Fragment) n=1 Tax=Aureoumbra l... [more]
A0A7S2HQA5_9STRA1.250e-2881.43Vacuolar protein 8 (Fragment) n=1 Tax=Dictyocha sp... [more]
A0A8J2SEI2_9STRA1.270e-2870.00Vacuolar protein 8 n=1 Tax=Pelagomonas calceolata ... [more]
A0A835Z6R1_9STRA4.270e-2866.36Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18570contigH-elongata_contig18570:1738..2961 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score176.0
Seed ortholog evalue2.8e-41
Seed eggNOG ortholog2880.D7FT75
KEGG koko:K08332
EggNOG free text desc.nucleus-vacuole junction assembly
EggNOG OGsKOG0167@1,KOG0167@2759,KOG4224@1,KOG4224@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04131
Hectar predicted targeting categorymitochondrion
Exons2
Model size975
Cds size975
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930061.7290125-CDS-H-elongata_contig18570:1737..19891622930061.7290125-CDS-H-elongata_contig18570:1737..1989Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18570 1738..1989 -
1691679266.0389166-CDS-H-elongata_contig18570:1737..19891691679266.0389166-CDS-H-elongata_contig18570:1737..1989Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18570 1738..1989 -
1622930061.7630875-CDS-H-elongata_contig18570:2238..29611622930061.7630875-CDS-H-elongata_contig18570:2238..2961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18570 2239..2961 -
1691679266.053479-CDS-H-elongata_contig18570:2238..29611691679266.053479-CDS-H-elongata_contig18570:2238..2961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18570 2239..2961 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18570.5029.1prot_H-elongata_contig18570.5029.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18570 1738..2961 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18570.5029.1

>prot_H-elongata_contig18570.5029.1 ID=prot_H-elongata_contig18570.5029.1|Name=mRNA_H-elongata_contig18570.5029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=325bp
LFTLARSLDVASQRYSTLALCNLSSGEHKARIVGEGAVRPLTFLARFPDL
EIQRYAALAIAGLALGDHGNPSNKLRITEEGALKPLADLVRFPEADVQRC
ACLAVNAIALGTHLSTKAAVMHEDGLPPLLALVNSSDDGDCARTAVYALG
SLCESDEVKARLVELGAIESVVHRSSLGDIEVKRAAGYFLALLCETREFH
DDLARGGGLQAVVALASLEDIECQECAAFSLAHLSSNREYQVTLVNLGAL
RPLVSMMAVEAEPRHYAGLALLKLADNFENHIRIAEEGGIQALLRLGRAR
STDDEVQYKAALTVGHLASNAVKML
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mRNA from alignment at H-elongata_contig18570:1738..2961-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18570.5029.1 ID=mRNA_H-elongata_contig18570.5029.1|Name=mRNA_H-elongata_contig18570.5029.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1224bp|location=Sequence derived from alignment at H-elongata_contig18570:1738..2961- (Himanthalia elongata Himel1 dioecious)
CTCTTCACGTTAGCCCGTTCTCTCGACGTGGCCAGCCAACGCTACTCCAC CCTGGCCCTGTGTAACTTGTCCTCTGGAGAACACAAAGCGCGTATTGTGG GAGAGGGTGCCGTGCGCCCTCTTACCTTCCTCGCCCGGTTCCCAGACCTC GAAATACAGAGATATGCGGCGTTGGCGATCGCCGGCCTGGCTCTTGGAGA CCACGGGAATCCGTCCAATAAGCTACGGATAACTGAAGAGGGCGCACTCA AGCCTCTCGCCGATCTCGTGCGGTTCCCCGAGGCAGATGTGCAGAGGTGC GCCTGTCTCGCAGTTAATGCCATCGCGCTCGGAACCCATCTTTCCACCAA GGCAGCCGTCATGCACGAAGATGGACTCCCCCCGCTGCTCGCGCTCGTCA ACTCCTCGGACGACGGAGACTGTGCGCGCACGGCGGTGTACGCCCTGGGC TCCTTGTGCGAGAGCGATGAGGTGAAGGCCAGGCTTGTGGAGCTCGGGGC AATCGAGAGCGTGGTCCATCGATCCAGTCTTGGTGATATCGAAGTCAAAC GCGCCGCGGGGTATTTCCTTGCCCTCCTGTGCGAGACGCGAGAGTTTCAC GACGACCTCGCGCGCGGGGGCGGACTCCAGGCGGTTGTGGCTCTCGCGAG TCTTGAGGATATCGAGTGTCAGGAATGCGCCGCGTTCTCGCTGGCACATC TGTCCAGTAATCGCGAATATCAGGTGAATGAAAGCGCGACGTTTTCGTTG GCAAATCGATTTGTTGTGCGCCACTCGTCTGTATAATGGAAAGCCCCGAG TGCATAGCTTAATGGGGGCGAATTATTGGACATCCAAGCGTACATCGGGG CTCGTAAAGTTTGAAGAGTGCAATTTGCTGCTTGATCCCCATTCCCCATT TTTTTTAGCGCTGCATCGTCCCGCGTTCACCTCATTCGACCCACTGCACA TCCACCGTTCCTCTCTCGAAAGGTGACGCTCGTGAACCTCGGGGCCCTCC GCCCCCTGGTGAGCATGATGGCAGTCGAAGCCGAGCCCCGCCACTACGCA GGGCTCGCCCTCCTGAAACTAGCCGACAATTTCGAGAATCATATCCGCAT CGCCGAGGAGGGCGGGATCCAGGCTCTGCTGCGCCTCGGTCGCGCGCGCT CTACCGATGACGAAGTGCAGTACAAGGCGGCGCTGACCGTTGGTCATCTC GCCTCCAATGCCGTCAAGATGTTA
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Coding sequence (CDS) from alignment at H-elongata_contig18570:1738..2961-

>mRNA_H-elongata_contig18570.5029.1 ID=mRNA_H-elongata_contig18570.5029.1|Name=mRNA_H-elongata_contig18570.5029.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1950bp|location=Sequence derived from alignment at H-elongata_contig18570:1738..2961- (Himanthalia elongata Himel1 dioecious)
CTCTTCACGTTAGCCCGTTCTCTCGACGTGGCCAGCCAACGCTACTCCAC
CCTGGCCCTGTGTAACTTGTCCTCTGGAGAACACAAAGCGCGTATTGTGG
GAGAGGGTGCCGTGCGCCCTCTTACCTTCCTCGCCCGGTTCCCAGACCTC
GAAATACAGAGATATGCGGCGTTGGCGATCGCCGGCCTGGCTCTTGGAGA
CCACGGGAATCCGTCCAATAAGCTACGGATAACTGAAGAGGGCGCACTCA
AGCCTCTCGCCGATCTCGTGCGGTTCCCCGAGGCAGATGTGCAGAGGTGC
GCCTGTCTCGCAGTTAATGCCATCGCGCTCGGAACCCATCTTTCCACCAA
GGCAGCCGTCATGCACGAAGATGGACTCCCCCCGCTGCTCGCGCTCGTCA
ACTCCTCGGACGACGGAGACTGTGCGCGCACGGCGGTGTACGCCCTGGGC
TCCTTGTGCGAGAGCGATGAGGTGAAGGCCAGGCTTGTGGAGCTCGGGGC
AATCGAGAGCGTGGTCCATCGATCCAGTCTTGGTGATATCGAAGTCAAAC
GCGCCGCGGGGTATTTCCTTGCCCTCCTGTGCGAGACGCGAGAGTTTCAC
GACGACCTCGCGCGCGGGGGCGGACTCCAGGCGGTTGTGGCTCTCGCGAG
TCTTGAGGATATCGAGTGTCAGGAATGCGCCGCGTTCTCGCTGGCACATC
TGTCCAGTAATCGCGAATATCAGCTCTTCACGTTAGCCCGTTCTCTCGAC
GTGGCCAGCCAACGCTACTCCACCCTGGCCCTGTGTAACTTGTCCTCTGG
AGAACACAAAGCGCGTATTGTGGGAGAGGGTGCCGTGCGCCCTCTTACCT
TCCTCGCCCGGTTCCCAGACCTCGAAATACAGAGATATGCGGCGTTGGCG
ATCGCCGGCCTGGCTCTTGGAGACCACGGGAATCCGTCCAATAAGCTACG
GATAACTGAAGAGGGCGCACTCAAGCCTCTCGCCGATCTCGTGCGGTTCC
CCGAGGCAGATGTGCAGAGGTGCGCCTGTCTCGCAGTTAATGCCATCGCG
CTCGGAACCCATCTTTCCACCAAGGCAGCCGTCATGCACGAAGATGGACT
CCCCCCGCTGCTCGCGCTCGTCAACTCCTCGGACGACGGAGACTGTGCGC
GCACGGCGGTGTACGCCCTGGGCTCCTTGTGCGAGAGCGATGAGGTGAAG
GCCAGGCTTGTGGAGCTCGGGGCAATCGAGAGCGTGGTCCATCGATCCAG
TCTTGGTGATATCGAAGTCAAACGCGCCGCGGGGTATTTCCTTGCCCTCC
TGTGCGAGACGCGAGAGTTTCACGACGACCTCGCGCGCGGGGGCGGACTC
CAGGCGGTTGTGGCTCTCGCGAGTCTTGAGGATATCGAGTGTCAGGAATG
CGCCGCGTTCTCGCTGGCACATCTGTCCAGTAATCGCGAATATCAGGTGA
CGCTCGTGAACCTCGGGGCCCTCCGCCCCCTGGTGAGCATGATGGCAGTC
GAAGCCGAGCCCCGCCACTACGCAGGGCTCGCCCTCCTGAAACTAGCCGA
CAATTTCGAGAATCATATCCGCATCGCCGAGGAGGGCGGGATCCAGGCTC
TGCTGCGCCTCGGTCGCGCGCGCTCTACCGATGACGAAGTGCAGTACAAG
GCGGCGCTGACCGTTGGTCATCTCGCCTCCAATGCCGTCAAGATGTTAGT
GACGCTCGTGAACCTCGGGGCCCTCCGCCCCCTGGTGAGCATGATGGCAG
TCGAAGCCGAGCCCCGCCACTACGCAGGGCTCGCCCTCCTGAAACTAGCC
GACAATTTCGAGAATCATATCCGCATCGCCGAGGAGGGCGGGATCCAGGC
TCTGCTGCGCCTCGGTCGCGCGCGCTCTACCGATGACGAAGTGCAGTACA
AGGCGGCGCTGACCGTTGGTCATCTCGCCTCCAATGCCGTCAAGATGTTA
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