mRNA_H-elongata_contig182692.4900.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: D8LLR6_ECTSI (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLR6_ECTSI) HSP 1 Score: 213 bits (541), Expect = 1.320e-61 Identity = 110/138 (79.71%), Postives = 120/138 (86.96%), Query Frame = 1
Query: 1 VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQAKAHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKNQEPAEVARCERVAPGI 405
VEGTNVHTG VA++KLNLIDLAGSERISKTDATGDRL+EAQNINRSLSALGDVI+AL K HVPFRNSKLTF DALSGNSKV+MFVNVSPASYNVTETLCSLNFA RCRS+KLG +KNQE EVA+ R + +
Sbjct: 766 VEGTNVHTGTVAKAKLNLIDLAGSERISKTDATGDRLREAQNINRSLSALGDVIAALGTGKGHVPFRNSKLTFVLQDALSGNSKVMMFVNVSPASYNVTETLCSLNFAKRCRSVKLGQANKNQEAPEVAKYRRASEAL 903
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S2BUC2_9STRA (Kinesin-like protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BUC2_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.660e-52 Identity = 92/133 (69.17%), Postives = 109/133 (81.95%), Query Frame = 1
Query: 7 GTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQAKA-HVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKNQEPAEVARCERV 393
G N+ RSKL+LIDLAGSER+SKTDATG+RLKEAQNIN+SLSALGDVI+ALS KA HVP+RNSKLTF D+L+GNSKV+MF N SPASYN ET+CSLNFAARCR+++LG K E AEVA+ +R+
Sbjct: 127 GRNIQDAGTVRSKLHLIDLAGSERVSKTDATGERLKEAQNINKSLSALGDVINALSGKKAAHVPYRNSKLTFLLQDSLAGNSKVMMFCNFSPASYNCAETMCSLNFAARCRAVELGQAKKGSEGAEVAKLKRM 259
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S1XRH5_9STRA (Kinesin-like protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRH5_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.310e-50 Identity = 94/123 (76.42%), Postives = 108/123 (87.80%), Query Frame = 1
Query: 1 VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISAL-SQAKAHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKN 357
V G N+HTG R+KL+LIDLAGSER+SKTDATGDRLKEAQNINRSLSALGDVI+AL S+ K HVPFRNSKLTF D+L GNSKV+MFVN+SPA YNV+ETLCSLNFAARCR+++LG S+N
Sbjct: 614 VLGKNLHTGEEMRAKLHLIDLAGSERVSKTDATGDRLKEAQNINRSLSALGDVIAALASRNKGHVPFRNSKLTFLLQDSLGGNSKVMMFVNISPAVYNVSETLCSLNFAARCRAVELGGASRN 736
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S2SB52_9STRA (Kinesin-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB52_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.000e-48 Identity = 88/125 (70.40%), Postives = 106/125 (84.80%), Query Frame = 1
Query: 25 GVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQAKAHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKNQEPAEVARCER 390
G +AR+KL+LIDLAGSER+SKTDATG RLKEAQNIN+SLSALGDVI++L + +HVPFRNSKLTF D+L+ NSK+ MFVN SPA YN +ETLCSLNFA RCR+++LGA KN E AEVAR ++
Sbjct: 638 GAIARAKLHLIDLAGSERVSKTDATGQRLKEAQNINKSLSALGDVIASLGKKASHVPFRNSKLTFLLQDSLTNNSKMQMFVNCSPAEYNASETLCSLNFAKRCRAVELGAAKKNTESAEVARLKK 762
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S1CLW4_9STRA (Kinesin-like protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLW4_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.450e-47 Identity = 91/134 (67.91%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 1 VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQAKA----HVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKNQEPAEVAR 381
V G N G R +L+LIDLAGSER+ KT A+G RLKEAQNINRSLSALGDV++AL+ AK HVPFRNSKLTF D+LSGNSKVLMFVNVSP +NV+ETLCSLNFA RCRS++LGA KN E E+ R
Sbjct: 388 VRGRNAVDGSTTRGRLHLIDLAGSERVGKTSASGARLKEAQNINRSLSALGDVVAALTSAKGKRAPHVPFRNSKLTFLLQDSLSGNSKVLMFVNVSPVMWNVSETLCSLNFAFRCRSVQLGAAKKNSESGEIQR 521
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S4D784_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D784_HETAK) HSP 1 Score: 161 bits (408), Expect = 1.690e-47 Identity = 90/137 (65.69%), Postives = 105/137 (76.64%), Query Frame = 1
Query: 1 VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQ----AKAHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKNQEPAEVARCER 390
VEG N G ++LNLIDLAGSERI+KTDA GDRLKEAQ IN SLSALGDVI+AL +HVPFRNSKLT D+LSG+SKV+MFVNVSPA YN+TETLCSLNFAARCR++KL K Q+ A V +C++
Sbjct: 74 VEGENTRDGNKVSARLNLIDLAGSERIAKTDAKGDRLKEAQAINSSLSALGDVIAALGAKGGGGASHVPFRNSKLTHLLQDSLSGDSKVMMFVNVSPAEYNITETLCSLNFAARCRNVKL---KKGQDTAIVQKCKQ 207
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A835ZG01_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG01_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.790e-47 Identity = 83/119 (69.75%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 1 VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQAK--AHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLG 342
V G N H G R+KLNLIDLAGSER+ KTDA+GDRLKEAQNINRSLSALGDVI+AL+ +H+PFRNSKLT+ D LSG K LMF NVSPA+YN+ ET+CSLNFAARCR+++LG
Sbjct: 218 VNGVNAHNGAATRAKLNLIDLAGSERVGKTDASGDRLKEAQNINRSLSALGDVIAALATRSKGSHIPFRNSKLTYLLQDCLSGGGKTLMFCNVSPAAYNLGETICSLNFAARCRAVELG 336
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S1XPD2_9STRA (Kinesin-like protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPD2_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.910e-46 Identity = 88/123 (71.54%), Postives = 104/123 (84.55%), Query Frame = 1
Query: 1 VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISAL-SQAKAHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKN 357
VE TN+ TG R KL+L+DLAGSERI+K+ ATG LKEAQNIN+SLSALGDVI+AL S+ K HVPFRNSKLTF D+L GNSKV+MFVN+SPA YNV+ETLCSLNFAARCR+++LG S+N
Sbjct: 610 VESTNLLTGEAYRGKLHLVDLAGSERINKSGATGQALKEAQNINKSLSALGDVIAALASRNKGHVPFRNSKLTFLLQDSLGGNSKVMMFVNISPAVYNVSETLCSLNFAARCRAVELGGASRN 732
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: A0A7S2W0I4_9STRA (Kinesin-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0I4_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.400e-45 Identity = 90/128 (70.31%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 7 GTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISALSQAK--AHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSKNQEPAEV 375
G ++ G S+LNLIDLAGSER+SKTDATG+RLKEAQNINRSLSALGDVI+AL + HVPFRNSKLT D+LSGNSKVLMF N+SPASYNV ET+CSLNFAARCRS++LG K E AE+
Sbjct: 584 GRSLTDGSTLTSRLNLIDLAGSERVSKTDATGERLKEAQNINRSLSALGDVINALGKKGKGGHVPFRNSKLTHLLQDSLSGNSKVLMFCNISPASYNVGETMCSLNFAARCRSVELGQARKGGESAEL 711
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Match: W7U268_9STRA (Kinesin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U268_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.390e-45 Identity = 89/123 (72.36%), Postives = 104/123 (84.55%), Query Frame = 1
Query: 1 VEGTNVHTGVVAR-SKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALGDVISAL-SQAKAHVPFRNSKLTF---DALSGNSKVLMFVNVSPASYNVTETLCSLNFAARCRSIKLGATSK 354
V G N+H +A SKL+LIDLAGSER+SKTDATGDRLKEAQNIN+SLSALGDVI+AL S+ KAH+P+RNSKLTF D+L GNSKVLMFVN+SPASYNV+ET+CSL FA RCR++ LG K
Sbjct: 717 VRGENLHDKSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHIPYRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKK 839 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182692.4900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig182692.4900.1 >prot_H-elongata_contig182692.4900.1 ID=prot_H-elongata_contig182692.4900.1|Name=mRNA_H-elongata_contig182692.4900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp VEGTNVHTGVVARSKLNLIDLAGSERISKTDATGDRLKEAQNINRSLSALback to top mRNA from alignment at H-elongata_contig182692:35..1199+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig182692.4900.1 ID=mRNA_H-elongata_contig182692.4900.1|Name=mRNA_H-elongata_contig182692.4900.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1165bp|location=Sequence derived from alignment at H-elongata_contig182692:35..1199+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig182692:35..1199+ >mRNA_H-elongata_contig182692.4900.1 ID=mRNA_H-elongata_contig182692.4900.1|Name=mRNA_H-elongata_contig182692.4900.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig182692:35..1199+ (Himanthalia elongata Himel1 dioecious)back to top |