mRNA_H-elongata_contig17464.4542.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 1.380e-130 Identity = 200/363 (55.10%), Postives = 262/363 (72.18%), Query Frame = 1
Query: 1 AIDTAVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDET--PWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDY--EYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTL--TALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
AI ++ +SV++ F+P V L+IFGD++TSD RRRC PD+ +T ELF+LH +VA LY + + L PFC ++PLM + HP+S + + D S +T PWGLA+AY DE ++T NDGWNADGS R++N+VPFS D+ +TDSEGNSWTPY+P N+P EF T++WQPL ESDGLGYI +Q+HVTPHIG+T RYFGF S DEEAF+SR +D PDY YK VLDE+ + A+ +KQ A+ FFD+K SLIPL + YFLR T + + ++E+QLA+YNG++LTWKEKI HD PRP ++I ++LGDE E YAG EGVQ +KASEWE +RT P SE+PSASACLC+
Sbjct: 81 AIQSSSWSVASAFQPPPV-LNIFGDRQTSDERRRCYPDTPETI--ELFSLHYKVAALYVLAHAALKAMPFCHAEIDPLMLGLDHPMSFMEEGEDASIDTSTPWGLAQAYVDEGWDYLTANDGWNADGSMGGREFNRVPFSGDFSMTDSEGNSWTPYVPRNSPNEFTDTKKWQPLEESDGLGYITTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRTIDRPDYLNRYKDVVHDVLDESAMTADSLYKQVAISFFDDKVNSLIPLSVDYFLRNTTQAEYTTTEFLQLSLEIQLALYNGVLLTWKEKIHHDRPRPSTMIKHKLGDELVEAYAGPGEGVQTMKASEWESFMRTNPTSEYPSASACLCE 440
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE) HSP 1 Score: 371 bits (952), Expect = 5.790e-122 Identity = 184/338 (54.44%), Postives = 243/338 (71.89%), Query Frame = 1
Query: 1 AIDTAVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIA--VLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEW 1002
A+D A FS+ ++F VALDIFGDKETSDARRRC+P D +G LF +HL VA LY Y G P+C D + LM+ G PLS++ D AD S +TPWGLAKAY DE +++ ENDGWNADG +++N++PF+ D+ TDS GN W Y P+NTP++F T++WQPLLESDGLGYI +Q+HVTPHIG TAR+FGF+++ +EEA+ SR+LD P Y + IA VL+ ++L A+D KQ A+ FFDNK SL+PL YF + DTL+ L+ ++ +++QL IYNG+VL+W+EKIRHD PRPPSV+ E+GDE E YAG + GVQ + ASEW
Sbjct: 73 ALDAAQFSLGSMFESNGVALDIFGDKETSDARRRCQPADGDEDGAVLFNMHLGVAGLYMAAYVGSEHMPWCTDTVSALMEAYGAPLSML-DVADASTDTPWGLAKAYVDEVMSFLMENDGWNADGGLGGKEFNRIPFTGDFSYTDSGGNEWNGYTPKNTPYKFARTKKWQPLLESDGLGYITAQEHVTPHIGVTARFFGFDTAENEEAWGSRKLDAPPYRNRHDEIAREVLEASKLAADDPAKQFAISFFDNKATSLLPLMTDYFAQRRDTLSRLEFFKVNLKLQLGIYNGVVLSWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDSGVQNMTASEW 409
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A6H5K7C3_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C3_9PHAE) HSP 1 Score: 358 bits (918), Expect = 2.510e-118 Identity = 177/311 (56.91%), Postives = 225/311 (72.35%), Query Frame = 1
Query: 157 RVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDET--PWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDY--EYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREA--DTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
+VA +Y + + L PFCR +EPLM GHPLS + + D S +T PWGL +AY +E ++T NDGWNADGS R++N+VPF+ ++ +TDSEG+SWTPY+P N+P+E +RWQPL+ESDG+GY+ Q+HVTPHIG+T RY GF S DEEAF+SR +D PDY Y VL+E AE +KQ A+ FFDNKF SLIPLKI +FLR + TA D Y+ T+EVQLAIYNGI+L WKEKIRHD PRPP+++ ++LGD E YAG +GVQ IKASEWEP IRTMPHSE+PS S+CLC+
Sbjct: 7 QVAEIYAVTHAALKAMPFCRAEIEPLMIARGHPLSFLEEGDDDSVDTSTPWGLGRAYANEGWNYLTANDGWNADGSMGGREFNRVPFTGEFSMTDSEGHSWTPYVPRNSPYELTKIKRWQPLMESDGVGYVSIQEHVTPHIGSTGRYLGFSSKEDEEAFSSRTIDAPDYLNRYNEVVHDVLNETATTAESPYKQFAISFFDNKFNSLIPLKIAFFLRSTTQEDYTATDFYQVTLEVQLAIYNGILLAWKEKIRHDRPRPPTMVKHKLGDALVEAYAGPGQGVQTIKASEWEPFIRTMPHSEYPSGSSCLCE 317
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: D8LSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP1_ECTSI) HSP 1 Score: 355 bits (911), Expect = 1.410e-117 Identity = 179/295 (60.68%), Postives = 219/295 (74.24%), Query Frame = 1
Query: 205 PFCRDLLEPLMDNIGHPLSLVMDDADPSDET--PWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDY--EYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREA--DTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
PFCR +EPLM GHPLS + + D S +T PWGL +AY +E ++ NDGWNADGS R++N+VPF+ D+ +TDS GNSWTPY P N+P+EF ++WQPL ESDGLGY+ +Q+HVTPHIG+T RYFGF S DEEAF+SR++D PDY Y A VLDE+ + A+ +KQ AV FFDNKF SLIPLKI +F R + T D Y+ TVEVQLAIYNGI+L WKEKI HD PRPPS+I + LGDE E YAG ++GVQ +KASEWEP IRTMPHSE+PSASACLC+
Sbjct: 2 PFCRAEIEPLMIARGHPLSFLEEGDDDSIDTSTPWGLGRAYANEIWDYLGANDGWNADGSMGGREFNRVPFTGDFSMTDSAGNSWTPYTPRNSPYEFTNFKKWQPLEESDGLGYVSTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRKIDGPDYLNRYDQAVRDVLDESAITADSPYKQFAVSFFDNKFTSLIPLKIAFFNRGTTKEDYTETDFYQVTVEVQLAIYNGILLAWKEKINHDRPRPPSMIRHLLGDELVEAYAGPDQGVQTMKASEWEPFIRTMPHSEYPSASACLCE 296
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE) HSP 1 Score: 347 bits (891), Expect = 1.980e-113 Identity = 188/384 (48.96%), Postives = 244/384 (63.54%), Query Frame = 1
Query: 34 LFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLV---MDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPW---------------------------------EFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYE--YKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
+F P VALDIFGDKETSDARRRC+P + E + +F LHL V+VLY I Y G P+C + + + +G P+SLV +P +TPWGLAKAY DE A++ ENDGWNADG R+ N PF+ D+ +DS GN+W Y P+N+P+ +F +T+RWQPL+ES+GLGY+ SQ HVTPHIG T R+FGF +S DEEA+ +R LD P Y+ Y A+ VL+ + + A D K A+ FDNKF SL PLKI+YF D L+ +D +V+ QLAIYN ++L W+EK+RHD PRP SVI ELGDE + YAG + G+Q IKASEWEP IRTMPHSE+PS S+C+C+
Sbjct: 1 MFEPNGVALDIFGDKETSDARRRCQPATE--EDRVIFDLHLSVSVLYAISYIGWKYMPYCSEQIAAEAEALGGPMSLVDVGEGHPEPGTDTPWGLAKAYIDEVWAFLMENDGWNADGRLGGREVNLTPFTGDFVFSDSAGNTWDGYEPKNSPYKTGRELAFFAHDLAILSAVRCAPCSFPKNCRRSQFSSTKRWQPLMESNGLGYLNSQVHVTPHIGVTGRFFGFNTSEDEEAWGARTLDRPPYQNRYDEAAREVLEASTVAAYDPAKLFAISLFDNKFNSLPPLKIVYFFDRGD-LSLMDFLELSVKSQLAIYNSVLLAWREKVRHDAPRPTSVIRNELGDELVDAYAGPDIGIQTIKASEWEPYIRTMPHSEYPSGSSCICE 381
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A8J5X3W0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3W0_DIALT) HSP 1 Score: 216 bits (549), Expect = 9.490e-62 Identity = 141/341 (41.35%), Postives = 188/341 (55.13%), Query Frame = 1
Query: 55 ALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFC---RDLLEPLMDNIGHPLSLVMDDADPSD-ETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
ALD F + S ARRRC G LF +H +VA+ YT+ + + T F + LL ++ + G +S + D A+ SD TPWGLA+ DE + ++DG+NADGS +RD+N+VP+ D+ Y P N+ +K WQPL E DG GYI +Q HVTPHIG TAR F +NDE A L P Y + ++ VL +R A + K+ V FFDNKF SLIPL + Y R + V AIY+ ++ WKEK+RHDL RPPSVI + DE +Y G E IK S+WE IR MPH+E+PS S+CLC+
Sbjct: 93 ALDAFARESMSAARRRCGSTVDYAAGDALF-VHRQVALAYTLAF--TVDTVFPEANKGLLSSILTSWGLDMS-ICDTANCSDVSTPWGLARTAVDELEDFF-KHDGFNADGSLSRDFNRVPYEDWRAES--------YSPVNSADRYKRKRLWQPLPEHDGRGYIANQQHVTPHIGWTARPFVL--TNDEVCDAR--LAPPQYVLNAEALLVL--SRTGALNSTKKMEVEFFDNKFTSLIPLLVQYTARLGVNADSFHFIWLDVATAAAIYDATIVGWKEKVRHDLVRPPSVIQSQFRDETVMSYRGPSEEPGDIKGSDWEAYIRIMPHAEYPSGSSCLCR 414
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: R7QSC8_CHOCR (PAP2/haloperoxidase-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC8_CHOCR) HSP 1 Score: 211 bits (537), Expect = 4.230e-60 Identity = 135/356 (37.92%), Postives = 187/356 (52.53%), Query Frame = 1
Query: 52 VALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSD----ETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWT--PYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKI-LYFLR----------EADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCKV 1068
+ALD +G+ + R C DSS+ FAL+ VA+ Y P R + L+ G L D + P+ TPWGLA Y + W T DGWN DG+ +R+YN++PF D WT PY+PENTPWE K E WQPL+E + +G++ Q+HVT HIG +G D+E + S E P Y+Y ++ + MA+D+ + V FDNKF+SL+ L+I L F EADT++A A+Y ++L WKEKI HD RPPS + +L ++ YAG +G + ++A +WEP IRTMPHSE+PS SAC C V
Sbjct: 89 LALDAWGNDQPV---RFCN-DSSN------FALYRSVALAYITHMCFSNSFPELRAEFDSLVTPWGINPKLCTDSSKPNACGDINTPWGLAFLRYRQFLDW-TSRDGWNRDGAISREYNRIPFQD----------WTQDPYVPENTPWELKKKENWQPLMEDNNIGFLFYQEHVTAHIGQ----YGRSLYVDDEDYCSAEAPKPKYKYDEELRELIRRSAAMAQDDVAKAKVQIFDNKFSSLVFLQIDLLFANGFHADSWKFIEADTISA-----------AALYESVMLVWKEKIAHDACRPPSRMVRDLAGQKIFAYAGANQGKKQMRAEDWEPYIRTMPHSEYPSGSACFCAV 408
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A448Z7Y0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7Y0_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.260e-58 Identity = 128/362 (35.36%), Postives = 201/362 (55.52%), Query Frame = 1
Query: 13 AVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGH-PLSLVMDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSD--------YEITDSEGNSWTPYIPENTPWEF---KTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLC 1062
AV++V+ +F P ALDI+G +A+ Y Y ++ P + L +MDN+ + P+S ++D++ P TPWGLA+A D+ + + +++DGWNADGS D+NK+PF D Y+ DS G+ + E + +TT W+PLLE+D GY Q+HVTP G T R +G + + E+FA + P+Y Y + VL E R A D+ K+ V +D+KF SL+P++I + + A +++ + + + + A+Y+ +L W+EK+ HD RP +V+ GDEE TYAG EG + I+AS+W+P IRTMPH+E+PS S+C+C
Sbjct: 103 AVYNVAAMFHP--FALDIWG-----------------------------LAITYAFAYSAMVLIPSITEPLTFIMDNVLNLPMSNLLDESPPDIGTPWGLARATVDDMTEY-SKSDGWNADGSLANDFNKMPFGDFDYMEYSRYKAKDSLGSLNATALKEKVCGQDGGERTTWNWEPLLETDYRGYFSKQEHVTPFAGFTGRLYGL-TVEEYESFA---IAPPEYNYCQEADFVLSETREAATDDQKKAEVEAYDSKFTSLLPMQINWSI--ATGVSSFEFWYMDMALVTAMYDATMLVWREKVVHDAVRPTTVVHALKGDEEVTTYAGPYEGSKTIRASDWQPFIRTMPHAEYPSGSSCIC 426
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A0G4IG90_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IG90_9ALVE) HSP 1 Score: 162 bits (411), Expect = 1.190e-40 Identity = 101/264 (38.26%), Postives = 142/264 (53.79%), Query Frame = 1
Query: 298 PWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWTPYIPEN-----TPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGD-EEFETYAGREE-GVQLIKASEWEPLIRTMPHSEFPSASACLCKV 1068
PW +A+ DE+ A+ DG+NA G +YN+ P+SD+ TD GN W Y P N TP T W PL ESDG G+ DHVT + G T R G + SR+ P Y+Y + VL+E R A+D+ +V +DNK SL + R + T + +R V + ++ NG+V+TW+EK+R + RPP+V G ++ TYAG G + I S+W+P+IRTMPH+E PS SACLC+V
Sbjct: 188 PWTIARCKGDESIAFFDRTDGFNALGILTSEYNRQPYSDFNYTDRNGNQWRAYRPRNSEDGATP----TNSHWAPLRESDGDGFFKQADHVTAYAGVTGRVSGRRQTEKCAFLKSRKTAAPAYDYDAELDFVLEETRKAADDDRAFLSVEIYDNKADSLAFQAAKWCSR--NKCTDWEFWRLFVVLGASLNNGVVVTWREKLRQSVIRPPTVSKVLGGTGKKAVTYAGPFVLGSREISVSDWKPVIRTMPHAEHPSGSACLCRV 445
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A0G4IDW2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IDW2_9ALVE) HSP 1 Score: 155 bits (391), Expect = 1.930e-38 Identity = 105/305 (34.43%), Postives = 157/305 (51.48%), Query Frame = 1
Query: 163 AVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWTPYIPEN---TPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREE-GVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
A+ ++ YGGL LM+ P S + TPW +AK ++ ++ E DGWN+DGS +R+ N+ PF D++ D N + Y EN TP T W PL E G+G+ HVTP IG T+R S N + + DP Y+Y VL+E R A D + V FD+K +SL+ +L+ + A+ L+ + ++ + + +++ VL W+EK+ +L RP +V G E T+AG + G + IK EWEP+IRTMPH+E+PS SAC+CK
Sbjct: 249 AIRASVAYGGLKKA-------YRLMEEY-DPASCDFSKKENQPATPWSIAKCACVKSLSYF-ETDGWNSDGSLSREVNRKPFEDFDFFDGT-NQYNKY--ENQLCTPNSDVMT--WTPLREDSGVGFFQRSLHVTPQIGLTSRLLTVPSENKCSYLENETVPDPQYDYDFELDFVLEETRKTANDNKRFVEVEAFDSKLSSLVAQAVLWGV--ANKLSEFEHWKLALTFSITMHDATVLAWREKVYWNLIRPTTVAERLGGTERKSTWAGGDVLGEREIKVVEWEPVIRTMPHAEYPSGSACMCK 537 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17464.4542.1 >prot_H-elongata_contig17464.4542.1 ID=prot_H-elongata_contig17464.4542.1|Name=mRNA_H-elongata_contig17464.4542.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp AIDTAVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALback to top mRNA from alignment at H-elongata_contig17464:502..3664- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17464.4542.1 ID=mRNA_H-elongata_contig17464.4542.1|Name=mRNA_H-elongata_contig17464.4542.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3163bp|location=Sequence derived from alignment at H-elongata_contig17464:502..3664- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17464:502..3664- >mRNA_H-elongata_contig17464.4542.1 ID=mRNA_H-elongata_contig17464.4542.1|Name=mRNA_H-elongata_contig17464.4542.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2166bp|location=Sequence derived from alignment at H-elongata_contig17464:502..3664- (Himanthalia elongata Himel1 dioecious)back to top |