mRNA_H-elongata_contig17464.4542.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17464.4542.1
Unique NamemRNA_H-elongata_contig17464.4542.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 1.380e-130
Identity = 200/363 (55.10%), Postives = 262/363 (72.18%), Query Frame = 1
Query:    1 AIDTAVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDET--PWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDY--EYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTL--TALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
            AI ++ +SV++ F+P  V L+IFGD++TSD RRRC PD+ +T   ELF+LH +VA LY + +  L   PFC   ++PLM  + HP+S + +  D S +T  PWGLA+AY DE   ++T NDGWNADGS   R++N+VPFS D+ +TDSEGNSWTPY+P N+P EF  T++WQPL ESDGLGYI +Q+HVTPHIG+T RYFGF S  DEEAF+SR +D PDY   YK     VLDE+ + A+  +KQ A+ FFD+K  SLIPL + YFLR       T  +  + ++E+QLA+YNG++LTWKEKI HD PRP ++I ++LGDE  E YAG  EGVQ +KASEWE  +RT P SE+PSASACLC+
Sbjct:   81 AIQSSSWSVASAFQPPPV-LNIFGDRQTSDERRRCYPDTPETI--ELFSLHYKVAALYVLAHAALKAMPFCHAEIDPLMLGLDHPMSFMEEGEDASIDTSTPWGLAQAYVDEGWDYLTANDGWNADGSMGGREFNRVPFSGDFSMTDSEGNSWTPYVPRNSPNEFTDTKKWQPLEESDGLGYITTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRTIDRPDYLNRYKDVVHDVLDESAMTADSLYKQVAISFFDDKVNSLIPLSVDYFLRNTTQAEYTTTEFLQLSLEIQLALYNGVLLTWKEKIHHDRPRPSTMIKHKLGDELVEAYAGPGEGVQTMKASEWESFMRTNPTSEYPSASACLCE 440          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 5.790e-122
Identity = 184/338 (54.44%), Postives = 243/338 (71.89%), Query Frame = 1
Query:    1 AIDTAVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIA--VLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEW 1002
            A+D A FS+ ++F    VALDIFGDKETSDARRRC+P   D +G  LF +HL VA LY   Y G    P+C D +  LM+  G PLS++ D AD S +TPWGLAKAY DE  +++ ENDGWNADG    +++N++PF+ D+  TDS GN W  Y P+NTP++F  T++WQPLLESDGLGYI +Q+HVTPHIG TAR+FGF+++ +EEA+ SR+LD P Y  +   IA  VL+ ++L A+D  KQ A+ FFDNK  SL+PL   YF +  DTL+ L+ ++  +++QL IYNG+VL+W+EKIRHD PRPPSV+  E+GDE  E YAG + GVQ + ASEW
Sbjct:   73 ALDAAQFSLGSMFESNGVALDIFGDKETSDARRRCQPADGDEDGAVLFNMHLGVAGLYMAAYVGSEHMPWCTDTVSALMEAYGAPLSML-DVADASTDTPWGLAKAYVDEVMSFLMENDGWNADGGLGGKEFNRIPFTGDFSYTDSGGNEWNGYTPKNTPYKFARTKKWQPLLESDGLGYITAQEHVTPHIGVTARFFGFDTAENEEAWGSRKLDAPPYRNRHDEIAREVLEASKLAADDPAKQFAISFFDNKATSLLPLMTDYFAQRRDTLSRLEFFKVNLKLQLGIYNGVVLSWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDSGVQNMTASEW 409          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A6H5K7C3_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C3_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 2.510e-118
Identity = 177/311 (56.91%), Postives = 225/311 (72.35%), Query Frame = 1
Query:  157 RVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDET--PWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDY--EYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREA--DTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
            +VA +Y + +  L   PFCR  +EPLM   GHPLS + +  D S +T  PWGL +AY +E   ++T NDGWNADGS   R++N+VPF+ ++ +TDSEG+SWTPY+P N+P+E    +RWQPL+ESDG+GY+  Q+HVTPHIG+T RY GF S  DEEAF+SR +D PDY   Y      VL+E    AE  +KQ A+ FFDNKF SLIPLKI +FLR    +  TA D Y+ T+EVQLAIYNGI+L WKEKIRHD PRPP+++ ++LGD   E YAG  +GVQ IKASEWEP IRTMPHSE+PS S+CLC+
Sbjct:    7 QVAEIYAVTHAALKAMPFCRAEIEPLMIARGHPLSFLEEGDDDSVDTSTPWGLGRAYANEGWNYLTANDGWNADGSMGGREFNRVPFTGEFSMTDSEGHSWTPYVPRNSPYELTKIKRWQPLMESDGVGYVSIQEHVTPHIGSTGRYLGFSSKEDEEAFSSRTIDAPDYLNRYNEVVHDVLNETATTAESPYKQFAISFFDNKFNSLIPLKIAFFLRSTTQEDYTATDFYQVTLEVQLAIYNGILLAWKEKIRHDRPRPPTMVKHKLGDALVEAYAGPGQGVQTIKASEWEPFIRTMPHSEYPSGSSCLCE 317          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: D8LSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP1_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.410e-117
Identity = 179/295 (60.68%), Postives = 219/295 (74.24%), Query Frame = 1
Query:  205 PFCRDLLEPLMDNIGHPLSLVMDDADPSDET--PWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDY--EYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREA--DTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
            PFCR  +EPLM   GHPLS + +  D S +T  PWGL +AY +E   ++  NDGWNADGS   R++N+VPF+ D+ +TDS GNSWTPY P N+P+EF   ++WQPL ESDGLGY+ +Q+HVTPHIG+T RYFGF S  DEEAF+SR++D PDY   Y  A   VLDE+ + A+  +KQ AV FFDNKF SLIPLKI +F R    +  T  D Y+ TVEVQLAIYNGI+L WKEKI HD PRPPS+I + LGDE  E YAG ++GVQ +KASEWEP IRTMPHSE+PSASACLC+
Sbjct:    2 PFCRAEIEPLMIARGHPLSFLEEGDDDSIDTSTPWGLGRAYANEIWDYLGANDGWNADGSMGGREFNRVPFTGDFSMTDSAGNSWTPYTPRNSPYEFTNFKKWQPLEESDGLGYVSTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRKIDGPDYLNRYDQAVRDVLDESAITADSPYKQFAVSFFDNKFTSLIPLKIAFFNRGTTKEDYTETDFYQVTVEVQLAIYNGILLAWKEKINHDRPRPPSMIRHLLGDELVEAYAGPDQGVQTMKASEWEPFIRTMPHSEYPSASACLCE 296          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 1.980e-113
Identity = 188/384 (48.96%), Postives = 244/384 (63.54%), Query Frame = 1
Query:   34 LFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLV---MDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGS-ANRDYNKVPFS-DYEITDSEGNSWTPYIPENTPW---------------------------------EFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYE--YKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
            +F P  VALDIFGDKETSDARRRC+P +   E + +F LHL V+VLY I Y G    P+C + +    + +G P+SLV       +P  +TPWGLAKAY DE  A++ ENDGWNADG    R+ N  PF+ D+  +DS GN+W  Y P+N+P+                                 +F +T+RWQPL+ES+GLGY+ SQ HVTPHIG T R+FGF +S DEEA+ +R LD P Y+  Y  A+  VL+ + + A D  K  A+  FDNKF SL PLKI+YF    D L+ +D    +V+ QLAIYN ++L W+EK+RHD PRP SVI  ELGDE  + YAG + G+Q IKASEWEP IRTMPHSE+PS S+C+C+
Sbjct:    1 MFEPNGVALDIFGDKETSDARRRCQPATE--EDRVIFDLHLSVSVLYAISYIGWKYMPYCSEQIAAEAEALGGPMSLVDVGEGHPEPGTDTPWGLAKAYIDEVWAFLMENDGWNADGRLGGREVNLTPFTGDFVFSDSAGNTWDGYEPKNSPYKTGRELAFFAHDLAILSAVRCAPCSFPKNCRRSQFSSTKRWQPLMESNGLGYLNSQVHVTPHIGVTGRFFGFNTSEDEEAWGARTLDRPPYQNRYDEAAREVLEASTVAAYDPAKLFAISLFDNKFNSLPPLKIVYFFDRGD-LSLMDFLELSVKSQLAIYNSVLLAWREKVRHDAPRPTSVIRNELGDELVDAYAGPDIGIQTIKASEWEPYIRTMPHSEYPSGSSCICE 381          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A8J5X3W0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3W0_DIALT)

HSP 1 Score: 216 bits (549), Expect = 9.490e-62
Identity = 141/341 (41.35%), Postives = 188/341 (55.13%), Query Frame = 1
Query:   55 ALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFC---RDLLEPLMDNIGHPLSLVMDDADPSD-ETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWTPYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
            ALD F  +  S ARRRC        G  LF +H +VA+ YT+ +   + T F    + LL  ++ + G  +S + D A+ SD  TPWGLA+   DE   +  ++DG+NADGS +RD+N+VP+ D+            Y P N+   +K    WQPL E DG GYI +Q HVTPHIG TAR F    +NDE   A   L  P Y   + ++ VL  +R  A +  K+  V FFDNKF SLIPL + Y  R      +       V    AIY+  ++ WKEK+RHDL RPPSVI  +  DE   +Y G  E    IK S+WE  IR MPH+E+PS S+CLC+
Sbjct:   93 ALDAFARESMSAARRRCGSTVDYAAGDALF-VHRQVALAYTLAF--TVDTVFPEANKGLLSSILTSWGLDMS-ICDTANCSDVSTPWGLARTAVDELEDFF-KHDGFNADGSLSRDFNRVPYEDWRAES--------YSPVNSADRYKRKRLWQPLPEHDGRGYIANQQHVTPHIGWTARPFVL--TNDEVCDAR--LAPPQYVLNAEALLVL--SRTGALNSTKKMEVEFFDNKFTSLIPLLVQYTARLGVNADSFHFIWLDVATAAAIYDATIVGWKEKVRHDLVRPPSVIQSQFRDETVMSYRGPSEEPGDIKGSDWEAYIRIMPHAEYPSGSSCLCR 414          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: R7QSC8_CHOCR (PAP2/haloperoxidase-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC8_CHOCR)

HSP 1 Score: 211 bits (537), Expect = 4.230e-60
Identity = 135/356 (37.92%), Postives = 187/356 (52.53%), Query Frame = 1
Query:   52 VALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSD----ETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWT--PYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKI-LYFLR----------EADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLCKV 1068
            +ALD +G+ +     R C  DSS+      FAL+  VA+ Y          P  R   + L+   G    L  D + P+      TPWGLA   Y +   W T  DGWN DG+ +R+YN++PF D          WT  PY+PENTPWE K  E WQPL+E + +G++  Q+HVT HIG     +G     D+E + S E   P Y+Y      ++  +  MA+D+  +  V  FDNKF+SL+ L+I L F            EADT++A            A+Y  ++L WKEKI HD  RPPS +  +L  ++   YAG  +G + ++A +WEP IRTMPHSE+PS SAC C V
Sbjct:   89 LALDAWGNDQPV---RFCN-DSSN------FALYRSVALAYITHMCFSNSFPELRAEFDSLVTPWGINPKLCTDSSKPNACGDINTPWGLAFLRYRQFLDW-TSRDGWNRDGAISREYNRIPFQD----------WTQDPYVPENTPWELKKKENWQPLMEDNNIGFLFYQEHVTAHIGQ----YGRSLYVDDEDYCSAEAPKPKYKYDEELRELIRRSAAMAQDDVAKAKVQIFDNKFSSLVFLQIDLLFANGFHADSWKFIEADTISA-----------AALYESVMLVWKEKIAHDACRPPSRMVRDLAGQKIFAYAGANQGKKQMRAEDWEPYIRTMPHSEYPSGSACFCAV 408          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A448Z7Y0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7Y0_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.260e-58
Identity = 128/362 (35.36%), Postives = 201/362 (55.52%), Query Frame = 1
Query:   13 AVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFALHLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGH-PLSLVMDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSD--------YEITDSEGNSWTPYIPENTPWEF---KTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSASACLC 1062
            AV++V+ +F P   ALDI+G                             +A+ Y   Y  ++  P   + L  +MDN+ + P+S ++D++ P   TPWGLA+A  D+ + + +++DGWNADGS   D+NK+PF D        Y+  DS G+     + E    +    +TT  W+PLLE+D  GY   Q+HVTP  G T R +G  +  + E+FA   +  P+Y Y   +  VL E R  A D+ K+  V  +D+KF SL+P++I + +  A  +++ + +   + +  A+Y+  +L W+EK+ HD  RP +V+    GDEE  TYAG  EG + I+AS+W+P IRTMPH+E+PS S+C+C
Sbjct:  103 AVYNVAAMFHP--FALDIWG-----------------------------LAITYAFAYSAMVLIPSITEPLTFIMDNVLNLPMSNLLDESPPDIGTPWGLARATVDDMTEY-SKSDGWNADGSLANDFNKMPFGDFDYMEYSRYKAKDSLGSLNATALKEKVCGQDGGERTTWNWEPLLETDYRGYFSKQEHVTPFAGFTGRLYGL-TVEEYESFA---IAPPEYNYCQEADFVLSETREAATDDQKKAEVEAYDSKFTSLLPMQINWSI--ATGVSSFEFWYMDMALVTAMYDATMLVWREKVVHDAVRPTTVVHALKGDEEVTTYAGPYEGSKTIRASDWQPFIRTMPHAEYPSGSSCIC 426          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A0G4IG90_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IG90_9ALVE)

HSP 1 Score: 162 bits (411), Expect = 1.190e-40
Identity = 101/264 (38.26%), Postives = 142/264 (53.79%), Query Frame = 1
Query:  298 PWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWTPYIPEN-----TPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGD-EEFETYAGREE-GVQLIKASEWEPLIRTMPHSEFPSASACLCKV 1068
            PW +A+   DE+ A+    DG+NA G    +YN+ P+SD+  TD  GN W  Y P N     TP    T   W PL ESDG G+    DHVT + G T R  G   +       SR+   P Y+Y +    VL+E R  A+D+    +V  +DNK  SL      +  R  +  T  + +R  V +  ++ NG+V+TW+EK+R  + RPP+V     G  ++  TYAG    G + I  S+W+P+IRTMPH+E PS SACLC+V
Sbjct:  188 PWTIARCKGDESIAFFDRTDGFNALGILTSEYNRQPYSDFNYTDRNGNQWRAYRPRNSEDGATP----TNSHWAPLRESDGDGFFKQADHVTAYAGVTGRVSGRRQTEKCAFLKSRKTAAPAYDYDAELDFVLEETRKAADDDRAFLSVEIYDNKADSLAFQAAKWCSR--NKCTDWEFWRLFVVLGASLNNGVVVTWREKLRQSVIRPPTVSKVLGGTGKKAVTYAGPFVLGSREISVSDWKPVIRTMPHAEHPSGSACLCRV 445          
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Match: A0A0G4IDW2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IDW2_9ALVE)

HSP 1 Score: 155 bits (391), Expect = 1.930e-38
Identity = 105/305 (34.43%), Postives = 157/305 (51.48%), Query Frame = 1
Query:  163 AVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDETPWGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWTPYIPEN---TPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFESSNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKFASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDLPRPPSVITYELGDEEFETYAGREE-GVQLIKASEWEPLIRTMPHSEFPSASACLCK 1065
            A+  ++ YGGL            LM+    P S      +    TPW +AK    ++ ++  E DGWN+DGS +R+ N+ PF D++  D   N +  Y  EN   TP     T  W PL E  G+G+     HVTP IG T+R     S N      +  + DP Y+Y      VL+E R  A D  +   V  FD+K +SL+   +L+ +  A+ L+  + ++  +   + +++  VL W+EK+  +L RP +V     G E   T+AG +  G + IK  EWEP+IRTMPH+E+PS SAC+CK
Sbjct:  249 AIRASVAYGGLKKA-------YRLMEEY-DPASCDFSKKENQPATPWSIAKCACVKSLSYF-ETDGWNSDGSLSREVNRKPFEDFDFFDGT-NQYNKY--ENQLCTPNSDVMT--WTPLREDSGVGFFQRSLHVTPQIGLTSRLLTVPSENKCSYLENETVPDPQYDYDFELDFVLEETRKTANDNKRFVEVEAFDSKLSSLVAQAVLWGV--ANKLSEFEHWKLALTFSITMHDATVLAWREKVYWNLIRPTTVAERLGGTERKSTWAGGDVLGEREIKVVEWEPVIRTMPHAEYPSGSACMCK 537          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17464.4542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLS4_ECTSI1.380e-13055.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I1_9PHAE5.790e-12254.44CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A6H5K7C3_9PHAE2.510e-11856.91CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D8LSP1_ECTSI1.410e-11760.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTZ2_9PHAE1.980e-11348.96CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A8J5X3W0_DIALT9.490e-6241.35Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
R7QSC8_CHOCR4.230e-6037.92PAP2/haloperoxidase-like protein n=1 Tax=Chondrus ... [more]
A0A448Z7Y0_9STRA1.260e-5835.36Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A0G4IG90_9ALVE1.190e-4038.26Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A0G4IDW2_9ALVE1.930e-3834.43Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17464contigH-elongata_contig17464:502..3664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.5
Seed ortholog evalue2e-112
Seed eggNOG ortholog2880.D7G662
EggNOG OGs2DGTT@1,2S5V4@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1083
Cds size1083
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17464.4542.1prot_H-elongata_contig17464.4542.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17464 502..3664 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930013.1251376-CDS-H-elongata_contig17464:501..6991622930013.1251376-CDS-H-elongata_contig17464:501..699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 502..699 -
1691679246.135353-CDS-H-elongata_contig17464:501..6991691679246.135353-CDS-H-elongata_contig17464:501..699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 502..699 -
1622930013.142933-CDS-H-elongata_contig17464:1013..11101622930013.142933-CDS-H-elongata_contig17464:1013..1110Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 1014..1110 -
1691679246.1453378-CDS-H-elongata_contig17464:1013..11101691679246.1453378-CDS-H-elongata_contig17464:1013..1110Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 1014..1110 -
1622930013.1579251-CDS-H-elongata_contig17464:1769..19041622930013.1579251-CDS-H-elongata_contig17464:1769..1904Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 1770..1904 -
1691679246.1543076-CDS-H-elongata_contig17464:1769..19041691679246.1543076-CDS-H-elongata_contig17464:1769..1904Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 1770..1904 -
1622930013.1749592-CDS-H-elongata_contig17464:2620..27931622930013.1749592-CDS-H-elongata_contig17464:2620..2793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 2621..2793 -
1691679246.1632357-CDS-H-elongata_contig17464:2620..27931691679246.1632357-CDS-H-elongata_contig17464:2620..2793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 2621..2793 -
1622930013.1887124-CDS-H-elongata_contig17464:3184..36641622930013.1887124-CDS-H-elongata_contig17464:3184..3664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 3185..3664 -
1691679246.1751683-CDS-H-elongata_contig17464:3184..36641691679246.1751683-CDS-H-elongata_contig17464:3184..3664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17464 3185..3664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17464.4542.1

>prot_H-elongata_contig17464.4542.1 ID=prot_H-elongata_contig17464.4542.1|Name=mRNA_H-elongata_contig17464.4542.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp
AIDTAVFSVSNLFRPGTVALDIFGDKETSDARRRCKPDSSDTEGQELFAL
HLRVAVLYTIVYGGLMGTPFCRDLLEPLMDNIGHPLSLVMDDADPSDETP
WGLAKAYYDETSAWMTENDGWNADGSANRDYNKVPFSDYEITDSEGNSWT
PYIPENTPWEFKTTERWQPLLESDGLGYILSQDHVTPHIGATARYFGFES
SNDEEAFASRELDDPDYEYKSASIAVLDEARLMAEDEFKQDAVVFFDNKF
ASLIPLKILYFLREADTLTALDLYRATVEVQLAIYNGIVLTWKEKIRHDL
PRPPSVITYELGDEEFETYAGREEGVQLIKASEWEPLIRTMPHSEFPSAS
ACLCKVGPFA*
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mRNA from alignment at H-elongata_contig17464:502..3664-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17464.4542.1 ID=mRNA_H-elongata_contig17464.4542.1|Name=mRNA_H-elongata_contig17464.4542.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3163bp|location=Sequence derived from alignment at H-elongata_contig17464:502..3664- (Himanthalia elongata Himel1 dioecious)
GCCATCGACACCGCGGTGTTCTCTGTCTCCAATCTTTTCCGTCCGGGTAC CGTCGCCCTCGACATCTTCGGCGACAAAGAGACGTCCGACGCCCGTCGCA GGTGCAAACCCGACTCATCCGACACCGAAGGACAGGAACTCTTCGCCCTG CACCTTCGCGTCGCGGTGCTGTACACCATCGTGTACGGGGGGTTAATGGG CACGCCTTTCTGCCGAGACCTCCTGGAGCCGCTGATGGACAATATTGGCC ATCCTCTCTCCCTCGTCATGGACGACGCCGATCCCAGCGACGAAACACCG TGGGGGCTCGCTAAGGCCTACTACGACGAAACCTCCGCGTGGATGACGGA AAACGACGGCTGGAACGCCGACGGCAGCGCCAACCGAGACTACAACAAGG TCCCGTTCAGTGACTACGAAATCACCGACTCGGAGGGGAATTCGTGGACG CCGTACATCCCGGAGAACACTCCTTGGGAGGTTTGAAGACTGTTAAATAG TACTGTAAAGTGTTTCCCGCCATATATATTTTTAATTCTGCCGTAACGCC CTCCCCCCATGCCTGCGCGCGCAAAAAGACGTTGGACAAACCCCACACCT TTTGAGACTCATGGTTGTAATGTCTCCCCGAGATATTCCACCCACCAATC GTTCGCTCAATACATCTTGCCACAAAGATTCGCAAACGCCCATTGTGGAT GTTGCAAGCTCGGGCTAGTAACCTCGCCCCCATGGCAAATGAGCTAGCTT ACCGGTCGAACATCTGCTGCTTTTCTTCTCTTGTTAAATTAAAATAGTCG ATCATCGAAGTTATTCGTTGAATTTCAACCTTGGACTGTCCCGTGCCCCC TAACACAATACAAATTGCCAGTTCAAAACGACGGAGCGCTGGCAGCCCCT ACTGGAATCCGACGGCCTAGGCTACATATTATCGCAAGATCACGTGACGC CCCATATCGGGGCGACAGCTAGATACTTCGGATTCGAGTCTTCAAATGAC GAGGAGGCGTTCGCCTCACGAGAGCTCGATGACCCCGACTACGAGTGAGA GATCTGAAGGTCTAGCCCTAGGTCTAGACTCCAACACGATCGATGCCCCC CCCAAATGTTGAAGTAGTTCGATGCTTCTTCTCATTCGCTGCATCTGTTT TGGCCGTCGGGGTCCTTATGTGGCAATCTAGTTCCGCCGACGGCGTTATT TCCTTTAATACTACGTAGGGAACCGTCAACGAAATTCGACATGGGAATCG AGATGGCTTGGACCTATCAGTCAGACGTGCGGATGTCGAATCAGACTTAA TATATTGCGATCTTGTTAATTAGCTGGCTTAGCTACGATAATTATTGCCG TCAGCGTCCCTCCCTGCTCTCATAAAAAATCTACCTAGGTGTTACCCAAC TCCTGGATTGGAAAGTGCGCGATGTCTCTCTACGAGATAGTGTACTCACA GCACGCCGAAAAACACGATCGAATCAGGCCTGTTGTCAAAAGCCTGATAT CACATTGATGTGCTAGGTTATATATCTACTACTGCATGTCGAGGTTATGT ATTTATAGTCTGATAACCACTTTTGCGGTCTGCGTCCCTACCGCCCTTCC TGGTGCGCAAACGGCATTGTTCCCAAATACTCGACAGGGGAATGCGCGAC ATTTTTTGACGTGTATCCGCCTTTGAAGTGTGCCGGGATGTCGACGCAAT CTCTTGATAATATCCTCTCCCATTTTTCACGCGAACATCTCTGTTCCGTG ATTGGCGCAGATACAAAAGTGCGAGCATTGCTGTCCTTGACGAGGCTCGG CTCATGGCAGAGGACGAGTTCAAGCAGGACGCCGTCGTGTTTTTTGACAA CAAGTTTGCGTCCCTTATCCCCCTCAAGATCCTGTACTTCCTCAGGTACA TACGCCTCTTGGGATCTCCGGTAAACATCTTCCGGACAAGAGGCTGCAAA TGACGCAATACCTGATGGCTCATTAACGGACGCAACTAACCACATCCCAG AACATGGGATCGTTGTCCCTGTTTAATCGCCCTGGAAGCACGGCAGACAA TCGATTAGACGTGTCTTTTTGTTGCTAGGTCTGTAGTATGTGCCCTTTTT AGCGCTGGATGGCAGCTGGCATACACAAGTACTATGGGTCTGTTGAAGAA AGCGAACGGTGTATATATACGAACAAAATACACTGGAAGACAAATGCTTC CAGCTTTACGACACCCCTCGGTTAGGACCTAGTTTGTCGTCGTACGTAGG GAATGACATGTTTGTCTCCGGGGTAGGAATCAATACTTAGCTTTACTACG GCACATGGTTCGTTCAAGCGGACGACTCGAGTCGACGAATCGCCTCACGT GCAAAGGGAACGACCGTCTTCTCCGTTTTAAAGTCGCAGATTCCCCTTGC CTCCCATTAAAAAGGCATTCGTGGTGCGAATCTTTATACAATGCAGATAT ACGTTTTGATGTCCTTTGTCTACCTTTTATTGCCATATTTTTGCTGCACC TTAATTTTATCTTTTGTTGTCGATGACATCGCCGCTATTGTTTATTGTTT CCAGGGAGGCCGATACCTTGACGGCCTTAGATTTATACAGGGCTACCGTG GAAGTTCAACTAGCCATATACAACGGCATTGTTCTCACGTGGAAGGAAAA GGTAAAACAGAAGAGTCCGCCCCTCGCCCCCCGTCCTGCCCCCTCTCTCC GTTAGGAATCTCTCGTCCCGTTCAAGCCTTGATCGTATTAAGCAACCAAA TAATACTGTAGCGTAACGTTTTTACTATCTGCATCGCAATAAAATAAACA CAACAACAAAAATGTTGGTCGGCTTGATCGACTCGGACCTTTTGGGGTTT TTATACCGATTGAGTCTTTCGGGGTCGCTTGGATGCCTACATAAAAACGC TCGCCACCACCCTGCCAGACCACGTGCTCACACTTCTCTGTTTTGTTTAT GCCCTGGCGTGGTAGATTCGCCACGACCTGCCCCGTCCCCCCTCAGTTAT AACCTACGAGTTGGGTGATGAAGAATTCGAAACTTACGCCGGTCGTGAGG AGGGGGTTCAACTGATCAAGGCCTCCGAGTGGGAGCCGTTAATCAGGACG ATGCCCCACTCGGAGTTCCCCTCTGCCTCAGCTTGCCTATGCAAGGTGGG GCCCTTTGCTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig17464:502..3664-

>mRNA_H-elongata_contig17464.4542.1 ID=mRNA_H-elongata_contig17464.4542.1|Name=mRNA_H-elongata_contig17464.4542.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2166bp|location=Sequence derived from alignment at H-elongata_contig17464:502..3664- (Himanthalia elongata Himel1 dioecious)
GCCATCGACACCGCGGTGTTCTCTGTCTCCAATCTTTTCCGTCCGGGTAC
CGTCGCCCTCGACATCTTCGGCGACAAAGAGACGTCCGACGCCCGTCGCA
GGTGCAAACCCGACTCATCCGACACCGAAGGACAGGAACTCTTCGCCCTG
CACCTTCGCGTCGCGGTGCTGTACACCATCGTGTACGGGGGGTTAATGGG
CACGCCTTTCTGCCGAGACCTCCTGGAGCCGCTGATGGACAATATTGGCC
ATCCTCTCTCCCTCGTCATGGACGACGCCGATCCCAGCGACGAAACACCG
TGGGGGCTCGCTAAGGCCTACTACGACGAAACCTCCGCGTGGATGACGGA
AAACGACGGCTGGAACGCCGACGGCAGCGCCAACCGAGACTACAACAAGG
TCCCGTTCAGTGACTACGAAATCACCGACTCGGAGGGGAATTCGTGGACG
CCGTACATCCCGGAGAACACTCCTTGGGAGGCCATCGACACCGCGGTGTT
CTCTGTCTCCAATCTTTTCCGTCCGGGTACCGTCGCCCTCGACATCTTCG
GCGACAAAGAGACGTCCGACGCCCGTCGCAGGTGCAAACCCGACTCATCC
GACACCGAAGGACAGGAACTCTTCGCCCTGCACCTTCGCGTCGCGGTGCT
GTACACCATCGTGTACGGGGGGTTAATGGGCACGCCTTTCTGCCGAGACC
TCCTGGAGCCGCTGATGGACAATATTGGCCATCCTCTCTCCCTCGTCATG
GACGACGCCGATCCCAGCGACGAAACACCGTGGGGGCTCGCTAAGGCCTA
CTACGACGAAACCTCCGCGTGGATGACGGAAAACGACGGCTGGAACGCCG
ACGGCAGCGCCAACCGAGACTACAACAAGGTCCCGTTCAGTGACTACGAA
ATCACCGACTCGGAGGGGAATTCGTGGACGCCGTACATCCCGGAGAACAC
TCCTTGGGAGTTCAAAACGACGGAGCGCTGGCAGCCCCTACTGGAATCCG
ACGGCCTAGGCTACATATTATCGCAAGATCACGTGACGCCCCATATCGGG
GCGACAGCTAGATACTTCGGATTCGAGTCTTCAAATGACGAGGAGGCGTT
CGCCTCACGAGAGCTCGATGACCCCGACTACGATTCAAAACGACGGAGCG
CTGGCAGCCCCTACTGGAATCCGACGGCCTAGGCTACATATTATCGCAAG
ATCACGTGACGCCCCATATCGGGGCGACAGCTAGATACTTCGGATTCGAG
TCTTCAAATGACGAGGAGGCGTTCGCCTCACGAGAGCTCGATGACCCCGA
CTACGAATACAAAAGTGCGAGCATTGCTGTCCTTGACGAGGCTCGGCTCA
TGGCAGAGGACGAGTTCAAGCAGGACGCCGTCGTGTTTTTTGACAACAAG
TTTGCGTCCCTTATCCCCCTCAAGATCCTGTACTTCCTCAGATACAAAAG
TGCGAGCATTGCTGTCCTTGACGAGGCTCGGCTCATGGCAGAGGACGAGT
TCAAGCAGGACGCCGTCGTGTTTTTTGACAACAAGTTTGCGTCCCTTATC
CCCCTCAAGATCCTGTACTTCCTCAGGGAGGCCGATACCTTGACGGCCTT
AGATTTATACAGGGCTACCGTGGAAGTTCAACTAGCCATATACAACGGCA
TTGTTCTCACGTGGAAGGAAAAGGGAGGCCGATACCTTGACGGCCTTAGA
TTTATACAGGGCTACCGTGGAAGTTCAACTAGCCATATACAACGGCATTG
TTCTCACGTGGAAGGAAAAGATTCGCCACGACCTGCCCCGTCCCCCCTCA
GTTATAACCTACGAGTTGGGTGATGAAGAATTCGAAACTTACGCCGGTCG
TGAGGAGGGGGTTCAACTGATCAAGGCCTCCGAGTGGGAGCCGTTAATCA
GGACGATGCCCCACTCGGAGTTCCCCTCTGCCTCAGCTTGCCTATGCAAG
GTGGGGCCCTTTGCTTAAATTCGCCACGACCTGCCCCGTCCCCCCTCAGT
TATAACCTACGAGTTGGGTGATGAAGAATTCGAAACTTACGCCGGTCGTG
AGGAGGGGGTTCAACTGATCAAGGCCTCCGAGTGGGAGCCGTTAATCAGG
ACGATGCCCCACTCGGAGTTCCCCTCTGCCTCAGCTTGCCTATGCAAGGT
GGGGCCCTTTGCTTAA
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