mRNA_H-elongata_contig17446.4535.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17446.4535.1
Unique NamemRNA_H-elongata_contig17446.4535.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: D7FSN7_ECTSI (2OG-FeII_Oxy domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSN7_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 1.460e-91
Identity = 171/329 (51.98%), Postives = 206/329 (62.61%), Query Frame = 1 
Query:    1 GKEPAYVEGERQHVESFSCTRPLELAFDPHPRSHLHRGHDDKFFHRNLFPDDHVHGYGEAYTSLWKVFTERVTLPMIMALEVMLCLPPGFLMHKSGGMDSLNMSLLRSLHYPPGGGE-------ASFSSTTEVSQENPVKT--GVGISEHTDFEVITVMHEDSPGLWLRSP--GAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHDDLVRVHPLKVDHLDQLDRHRQESEARNAEVQGSRKYNLRSRAKHSERRLMSKVDDVHRTEI-NFQDWLAHRPEAILRKYPPTSQGVWVREKEQIAKS 951
            GKEPAY EGE+QHVESFSCTRPL  A      +HL RG +    H++LFPD  V G+G AY+SLW +   RV+LPM+ ALE MLCLP GFL+ KS   DSLNMSLLR+L YP    +       A        S+ N V T   VGISEHTDFEV T+MH+++ GL L +P  G  P WY+ PFR D LTVILGDM ELWT+GWLEAT HKV+SP  GQGAR+S VLFQAHDDLVR+HPL   H   L     E + R  +   + K N+ S           K        I +F  W+ +RP++ LRKY PT+QG WVR +E  AKS
Sbjct:  149 GKEPAYQEGEKQHVESFSCTRPLAHA----SCNHLPRGPE---LHKSLFPDSQVPGFGAAYSSLWAILRHRVSLPMMRALEHMLCLPSGFLLLKSAETDSLNMSLLRTLRYPACDVQHTSPARPAENKPKRRRSERNRVTTPVDVGISEHTDFEVFTIMHQETAGLHLHTPSRGPSPRWYKLPFRHDTLTVILGDMMELWTSGWLEATRHKVVSPACGQGARRSFVLFQAHDDLVRIHPLGATH---LATRTSEPDRRTGDAPDTPK-NMES--------CGGKEGSEQSLPIGSFAGWVRNRPKSALRKYRPTTQGAWVRRQEFRAKS 458
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A8J6VQK1_9CYAN (Isopenicillin N synthase family oxygenase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VQK1_9CYAN)

HSP 1 Score: 81.6 bits (200), Expect = 8.440e-14
Identity = 75/220 (34.09%), Postives = 101/220 (45.91%), Query Frame = 1 
Query:    4 KEPAYVEGERQHVESFSCTRPLELAFDPHPRSHLHRGHDDKFFHRNLFPDDHVHGYGEAYTSLWKVFTERVTLPMIMALEVMLCLPPGFLMHKSGGMDSLNMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHD 663
            +EPAY  G   HVESF     L L   P    ++    +      N++P+  + G+ E   + +     R+   ++ A   ML L        S       M LL   HYP  G +       E S    VK  VGIS H+DFE++T+MH+++PGL L S G E  W   P  PD  +VIL D  E  T G L AT H+V    L    R SL++F A D
Sbjct:  111 EEPAYEPGTISHVESFD----LGLHLLPDDPDYV----ESPLLGPNVYPN--LVGFQEDIDTYYAEIN-RMGSALLEAFAEMLELERNTFRQMSTRRAGSKMRLL---HYP--GADEQDRQPEEGSSLKGVK--VGISSHSDFEMLTIMHQNAPGLQLLSRGGE--WVDVPVIPDAFSVILDDALEFLTNGVLRATQHRV---PLTTWERYSLIMFHAAD 307
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A444SE90_ARMVU (Fe2OG dioxygenase domain-containing protein n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444SE90_ARMVU)

HSP 1 Score: 75.9 bits (185), Expect = 1.910e-12
Identity = 58/158 (36.71%), Postives = 82/158 (51.90%), Query Frame = 1 
Query:  226 MIMALEVMLCLPPGFLMHK-SGGMDSLNMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPK---LGQGARKSLVLFQAHDDLVRVHPL 687
            ++  LEV L LP G LM K      SLN +LLR LHYPP           E +++  ++ G     HTD+   T++ +D  G  L     +  W      PD + V +GD+ ++WTAG L AT H+V+ PK   + + AR+S+VLF   D  V V PL
Sbjct:   59 LLRCLEVGLDLPNGTLMDKHQNPFSSLNGTLLRILHYPP---------IPENAKDGLIRCGA----HTDYGTFTLLFQDDIG-GLEVKRRDGKWINADPIPDTILVNVGDLLQMWTAGRLLATPHRVLVPKEEVIRKCARRSVVLFFHPDHDVIVKPL 202
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A1W0A382_9STRA (N-acetylated-alpha-linked acidic dipeptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A382_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.960e-11
Identity = 64/228 (28.07%), Postives = 110/228 (48.25%), Query Frame = 1 
Query:    4 KEPAYVEGERQHVESFSCTRPLELAFDPHPRSHLHRGHDDKFFHRNLFPDDHVHGYGEAYTSLWKVFTERVTLPMIMALEVMLCLPPGFLMHKSGGMDSLNMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHDDLVRVHPL 687
            +EP+YV G   ++E +   + L       P S++ R   DK    N++P++ +  + +    L+   T  VT  +      ML LP      K   +++   + +R L YP         +T  + + N     VGI+ HTDFE  T++H+++ GL L +   +  W   P   D L +++GD+ E WT G+L+AT H+V++    Q  R+S+V F   +    + PL
Sbjct: 1327 EEPSYVPGVISYLEGYDLAQEL-------PVSYMER---DKGLGPNVWPEE-LPEFKKDVQGLYDT-TTNVTNALFEGFAEMLDLPRDTF-RKFNTIEA--QACMRLLTYPE--------NTAPMDERN-----VGIAAHTDFECFTIIHQNNSGLQLTT--LDGGWIDAPVMSDRLVIMVGDVLERWTNGYLKATPHRVLNT---QQKRQSIVRFNGAEGKAIIAPL 1521
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A813KM56_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KM56_POLGL)

HSP 1 Score: 72.0 bits (175), Expect = 1.900e-10
Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 1 
Query:  304 NMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHDDLVRVHPL 687
            +M  +R LHYP        ++     ++       GIS HTDFE  T+MH+ +PGL        P W   P RP    VI+GD+ E +T G+L AT H+V+        R S++ F A      V PL
Sbjct:  212 DMGTIRLLHYP--------AAADAEERDQRAAANYGISPHTDFEAFTLMHQSAPGLQFLPRSGGP-WIDAPVRPQEFVVIVGDVLERFTNGFLRATPHRVLQTAW---ERNSIIRFNAVTPETLVEPL 327
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A813DI67_POLGL (Pre-mRNA-splicing factor SLU7 n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DI67_POLGL)

HSP 1 Score: 72.0 bits (175), Expect = 3.670e-10
Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 1 
Query:  304 NMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHDDLVRVHPL 687
            +M  +R LHYP        ++     ++       GIS HTDFE  T+MH+ +PGL        P W   P RP    VI+GD+ E +T G+L AT H+V+        R S++ F A      V PL
Sbjct: 1016 DMGTIRLLHYP--------AAADAEERDQRAAANYGISPHTDFEAFTLMHQSAPGLQFLPRSGGP-WIDAPVRPQEFVVIVGDVLERFTNGFLRATPHRVLQTAW---ERNSIIRFNAVTPETLVEPL 1131
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: C1EJH2_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EJH2_MICCC)

HSP 1 Score: 68.6 bits (166), Expect = 4.120e-9
Identity = 42/96 (43.75%), Postives = 50/96 (52.08%), Query Frame = 1 
Query:  406 VGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDV--LTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHDDLVRVHPL 687
            VGISEHTDFE  T++H+ +PGL L+       W       D    T+I+ DM E WT GWL AT H+V    L    R SLV F   D    V PL
Sbjct:  284 VGISEHTDFEAFTILHQTAPGLELKDLAGN--WRVADVYRDQSKFTIIIADMMERWTNGWLRATPHRV---GLAAHERLSLVRFNGLDPDASVAPL 374
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: UPI000C76CB5F (UPF0676 protein C1494.01-like isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76CB5F)

HSP 1 Score: 63.5 bits (153), Expect = 3.590e-8
Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 
Query:  304 NMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTG-VGISEHTDFEVITVMHEDS-PGLWLRSPGAEPCWYQPPFRPD-----VLTVILGDMAELWTAGWLEATSHKVISPK---LGQGARKSLVLFQAHDDLVRVHPL 687
            N S LRSL+YPP  GE              +K G +   EH+D+   T++++D  PGL ++S  A   W      P      +++V +GD+ E+WTAG   AT H+V+ P        AR+S+VLF   DD V V PL
Sbjct:   71 NASALRSLYYPPILGE--------------LKPGYIRCGEHSDYGTFTLLYQDQYPGLQVKS--AAGSWVDAVPIPQTILDFLISVNIGDLLEMWTAGEYPATKHRVLIPDEELTKTTARQSIVLFVHPDDEVVVAPL 192
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A6A4WH71_AMPAM (UPF0676 protein n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WH71_AMPAM)

HSP 1 Score: 63.2 bits (152), Expect = 1.270e-7
Identity = 48/133 (36.09%), Postives = 64/133 (48.12%), Query Frame = 1 
Query:  310 SLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVMHEDS-PGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISP---KLGQGARKSLVLFQAHDDLVRVHPLKVD 696
            S +R L+YPP           +   E  V+ G    EHTD+   T++ +D   GL L +P  +  W      P  + V +GDM ELWTAG L AT H+V  P   +    AR+S+V F   DD   V PL  D
Sbjct:  173 SEMRVLYYPP---------VPDGLPEGTVRCG----EHTDYGTFTLLFQDDIGGLELLTPDQK--WEPAAPVPGTILVNIGDMMELWTAGQLRATKHRVSVPAGERRRAAARQSVVFFVVPDDKTIVAPLSGD 290
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BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Match: A0A2E6ECP1_9GAMM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A2E6ECP1_9GAMM)

HSP 1 Score: 62.4 bits (150), Expect = 2.310e-7
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 1 
Query:  397 KTGVGISEHTDFEVITVMHEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHKVISPKLGQGARKSLVLFQAHDDLVRVHPLK 690
            ++ VGIS HTDFE IT++ +++PGL LR+      W         + V+L DM E WT G  +AT H+V   +     R S+V+F A D+   + PL+
Sbjct:  194 ESNVGISAHTDFECITLIFQNAPGLELRTIDGR--WLDAESGTGRIIVMLDDMLERWTNGHFKATGHRV---RQTDEQRFSIVMFVAVDNTYTIAPLQ 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17446.4535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FSN7_ECTSI1.460e-9151.982OG-FeII_Oxy domain-containing protein n=2 Tax=Ect... [more]
A0A8J6VQK1_9CYAN8.440e-1434.09Isopenicillin N synthase family oxygenase n=4 Tax=... [more]
A0A444SE90_ARMVU1.910e-1236.71Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A1W0A382_9STRA8.960e-1128.07N-acetylated-alpha-linked acidic dipeptidase n=1 T... [more]
A0A813KM56_POLGL1.900e-1034.38Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A813DI67_POLGL3.670e-1034.38Pre-mRNA-splicing factor SLU7 n=1 Tax=Polarella gl... [more]
C1EJH2_MICCC4.120e-943.75Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
UPI000C76CB5F3.590e-836.23UPF0676 protein C1494.01-like isoform X1 n=2 Tax=E... [more]
A0A6A4WH71_AMPAM1.270e-736.09UPF0676 protein n=2 Tax=Amphibalanus amphitrite Ta... [more]
A0A2E6ECP1_9GAMM2.310e-737.76Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17446contigH-elongata_contig17446:399..6277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score294.7
Seed ortholog evalue5.4e-77
Seed eggNOG ortholog2880.D7FSN7
EggNOG free text desc.2OG-Fe(II) oxygenase superfamily
EggNOG OGs2D0AQ@1,2SDG1@2759
Ec32 ortholog descriptionNon-haem dioxygenase N-terminal domain
Ec32 orthologEc-07_002550.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size969
Cds size969
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17446.4535.1prot_H-elongata_contig17446.4535.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17446 399..6277 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930011.8794627-CDS-H-elongata_contig17446:398..5241622930011.8794627-CDS-H-elongata_contig17446:398..524Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 399..524 +
1691679245.4630206-CDS-H-elongata_contig17446:398..5241691679245.4630206-CDS-H-elongata_contig17446:398..524Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 399..524 +
1622930011.8967552-CDS-H-elongata_contig17446:3574..37131622930011.8967552-CDS-H-elongata_contig17446:3574..3713Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 3575..3713 +
1691679245.4754012-CDS-H-elongata_contig17446:3574..37131691679245.4754012-CDS-H-elongata_contig17446:3574..3713Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 3575..3713 +
1622930011.912824-CDS-H-elongata_contig17446:4051..41701622930011.912824-CDS-H-elongata_contig17446:4051..4170Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 4052..4170 +
1691679245.4842765-CDS-H-elongata_contig17446:4051..41701691679245.4842765-CDS-H-elongata_contig17446:4051..4170Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 4052..4170 +
1622930011.9307933-CDS-H-elongata_contig17446:4341..45061622930011.9307933-CDS-H-elongata_contig17446:4341..4506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 4342..4506 +
1691679245.493299-CDS-H-elongata_contig17446:4341..45061691679245.493299-CDS-H-elongata_contig17446:4341..4506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 4342..4506 +
1622930011.9541202-CDS-H-elongata_contig17446:5857..62771622930011.9541202-CDS-H-elongata_contig17446:5857..6277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 5858..6277 +
1691679245.5041318-CDS-H-elongata_contig17446:5857..62771691679245.5041318-CDS-H-elongata_contig17446:5857..6277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17446 5858..6277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17446.4535.1

>prot_H-elongata_contig17446.4535.1 ID=prot_H-elongata_contig17446.4535.1|Name=mRNA_H-elongata_contig17446.4535.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=323bp
GKEPAYVEGERQHVESFSCTRPLELAFDPHPRSHLHRGHDDKFFHRNLFP
DDHVHGYGEAYTSLWKVFTERVTLPMIMALEVMLCLPPGFLMHKSGGMDS
LNMSLLRSLHYPPGGGEASFSSTTEVSQENPVKTGVGISEHTDFEVITVM
HEDSPGLWLRSPGAEPCWYQPPFRPDVLTVILGDMAELWTAGWLEATSHK
VISPKLGQGARKSLVLFQAHDDLVRVHPLKVDHLDQLDRHRQESEARNAE
VQGSRKYNLRSRAKHSERRLMSKVDDVHRTEINFQDWLAHRPEAILRKYP
PTSQGVWVREKEQIAKSASLRL*
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mRNA from alignment at H-elongata_contig17446:399..6277+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17446.4535.1 ID=mRNA_H-elongata_contig17446.4535.1|Name=mRNA_H-elongata_contig17446.4535.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5879bp|location=Sequence derived from alignment at H-elongata_contig17446:399..6277+ (Himanthalia elongata Himel1 dioecious)
GGAAAGGAGCCGGCGTATGTGGAGGGAGAAAGGCAGCACGTGGAGAGCTT
CAGCTGCACAAGGCCTCTAGAGTTGGCTTTCGATCCACACCCTCGCAGCC
ACCTGCATCGAGGGCATGATGATAAGGTACCATGGGTACTACTGGTGGTA
GGATTAGGTTTGGAGCTAGTTGGATACATTTAATAATGTATTGGACAGGC
ACTTAACATGGTGTCGAACTTGCAAGATAGTGTGAAGCAAGTGGCCGCCA
CTGCCGAATGTTTATGTGAAGGTAACCCTTACAATCTACTCGATCGTATC
GGGCATAAGCAATGCACTTGTTGGTTGGCTGCCTCAACAACTTCTTCTCT
TCTTTGGACATCAACATACAGTACTTGTTTAATTTTCCGAACGAGCTTTC
CACTAGTGTTGGGTCTGAGTTTTTACCTATAGCGTGATTTAAGCCGAATG
CCTAATGATGTGTATTGATCTACGTACATCCGCTCAATAGTATTGATAGT
ACACCCCCGTACACTAGAAACTGCTCCCGATGAGATATGTAACCAAATAA
ATACGAAAGAAAGCGGTATCGCCTTGACACTAGGGCTGTCAGTTTCAAAA
AGACGTCGAAATCGACGACGTAGCTCTGTAAAGGCTCTTCACGGCTCAAC
CTATTCTTCCTGCGGTACAATATCAGGGGAATACCGTGGGAATACCGGCA
CAAGTTTGCCTCATGATTTCTTCGACCCATACATAGCGCCTCTGCAAACC
GTCATGCCTACTCTACCCATAATGGGTGTGGGAAAAGAGAGGCGCACAAT
AATTGGTCCATGGAGTTACCTCAATAGGCTGCATCCGTCACTCAAGCTAC
CTTCAGGACTGCTGGCTCAGTGCCGGTGGACCCTCGGTAGTAAATGCCAC
CGGGACTGGCCCGATGGCGGTTGACGGTAAAGATGGACGCCGTCGCGGAA
AACGGGAGGATCGACAGGATCCCGGGAGTAAGCACCAGATTCAGCCTGGG
TTGAGAGGATGGACAGGCTGGCGGGACGGGACTGCTGAACCCGTCTCGCG
AAACCAAATTCTCAGGCGCGAACGGGGCAAGGGAAAATTCGTTTTCCCTG
TTTAGCTGACCACGAGCAAAAGGCAACGAAATCCGGTTGATCTTACTCTG
CTAAATGTGATGACCATACATACATACATACCGTAACCACAGCTACGCGG
AAATTTCTAAGAGCCGCATATGTTTGCTCTATATGCCGTACCGTGCCGTA
TTTTCGAGATGGCACCGTAGACCGTACCAGAACCACACATACCGCATGGT
TCGCGGAACATCCATCCTCTGGGGCATCCCTATTCTAAGAGATAATACAA
GCGTTCCCTCCCCGAGTCTTAGCACGTTTTATTGACATTGAAACCCAACG
CATATAATATGCGGTTAATTTAATATATCGTTTATAGTATAGTAGTGTTG
TGTGGAGCAGCCGAACGTTTCCGCTCTCTTTACTCGTCGTAAACTTTAGG
TCGAGCATGGGAGTGTTGAAAGTGGACCAAATTATGTCCCTAACCCTCAT
GCATAACCATATGCCAGAGATATACCAATACGACGAAGTAGTACAGAAGC
AGAGGGAACGGCGAAGTCATTTTATCGAAGGTGTCGACTCGGCCCAGCAG
TGGGGTGCGGGCGAAGTCATCGGTATTGCGCTAGTATTCATAATAATTCG
TAGCGATACGCACAAGTCCTCAAAAGGAAGTGGAGGTGGTTCGTACACAT
GTGAACTGACGGGGTGTAATTTGTAAAGGCGAGCTATACTAGATCGCCAT
TCGTGTAGGCCTTCGTTTAGTAACTCGTAATCCTTCGTACACCACTGTCG
TACCGTGAACTTTATTATTCATAGAAAGGAAGCATGCAATAAATATATTT
ATTCGATAACGATCACGAAGATTATACGAAGACTATATCTTGATTATTTT
ATGCTTCTTCTGCCCCGATGATAACAAAAAACTTCTTATTGTAATGTTTT
GTTACCGTAGATCTCAGCACATCCCGTGTACCGTACTCCATCGTCTCCGG
CGTTTTCTGGTACCGTTTCCCAGATCCACTTTGGCCCCATGGTGTCCTGG
TACTGATTAGATTTGACCTGCAGTAAAAAACTGTGTTGGATTGGGTATAA
GGCTAATGTTATATAACTCAAGAGAAGACATATAGCCTACCTGTACAAGA
AATATAGCTCTAGAGTCTGATCGTGCAGCAGCACTTTCTTATCTATCTCT
CTACCTTCCTTCCTGAGTTCCCTAAATTATTGCAAATTATTGCACAATAT
TGCACATTCCCATTCTCATTCTGACCGCAGCGACTGTGAACCGACCAATA
TGACTGGGATGAATGAAGAAAATAACAAGACAAGTGATCTACACGTGCGA
AACGGAGGGAGCAAGTTAATACGAGCAACCGCAGCCGATCATAGTCACTA
ATACTCTTATTTATATAACTTATTCTGATAATGGAGAGTAATTTGTGTTC
GGTTAGTTTACATGAGGGACAGCATCAAAGGATAAACGCTGCATCTAGGA
GGCGCTTATGCCAGCTCGGGTATATTGATGTTGATGGCATTATTGCTAGT
ACAACTATTAATAGTACTTGATGCCCCCTGAGGAAGCGCCTCGCGAAAGA
CTAACGAACAGGGAAACATCTCGAAGATCTCGTATTCATCACACATATTA
CACTATCATGCTTTTGCTTTGATACCATCAGATATTAATGCTGCTTTTCC
GGATCAATGAAGTTTTGCCTTGTCATATTTCGATAGTTCTATAGTATTTT
TATTAGAAAAACCTTGAACTCATTCCAACCCTCCGAACATCCACACTCTT
AGCGCCGTGAGAGGTTAAACTATACTATACTTAGTATACCATAAAATACT
ATACTGTGTAAACTACGAAAGAACGAAAGAGGTCATCAGAGGTCATCACC
TGCAGTACAAGCTTGATGAATAGTATACATACGGCGTCTCGGCTAGGATA
CATTTCTTGTATCGAAATATATGTGTTATGCGATGATCATGATCATTTCA
GTAGTCTAGCTCGTGCAGTGTTGAACAAAAATTATTTGAATAGCCTCGAG
CCTCGAAACTTAAAGTAATGTAACACAACCCTCCTTTTTGTGCCGTATTA
TATTGCATGTCAATATATTGTACCAGTTCTTCCACCGTAACCTGTTCCCA
GACGATCATGTCCATGGGTATGGAGAGGCGTACACATCCTTGTGGAAGGT
GTTCACCGAGCGAGTTACTCTCCCAATGATAATGGCTCTGGAGGTGATGC
TGTGCTTACCCCCAGGTGTGGTAAGGTGCGGGTGCGTTTCTTGGGGTATG
GGAAGCTTGTCCAGTAGAGACCGTCGCAGTGCCGTTCTAGTTATTCAAAA
TACAGTCGATAATTCTACAATTGTGAAATCATCAATATTTCATTCATTTA
CAATGAATGTGGTCGGTTTAAAATACGCCCAAAATATTTAGTCTGCGCGA
ATAATGGCTTAAAAGCTTCATGCTCACACGTCTTACGTCTTGCGGTAGGA
AAAATTCATGGAAATTTAATTGATAATTAATCAATATTTAATCGATAATT
GATCAATATACTCCTCTCTCATGTACTACACTGTACTGCACTATATTGTA
CAGGTTTTCTGATGCACAAGAGTGGAGGAATGGACAGCCTAAACATGTCA
CTCCTTCGATCCCTACACTACCCTCCCGGAGGTGGTGAGGCATCATTCTC
GTCCACTACCGAAGTAAGTCAGGTCACATCATGTGGGAGCAAAAATTGAC
ACCAGGCACCTCGTTTGCTTATAATTCCTTAAAATGTTGATATTTTAATT
AATGTTGTAAGTATTTCGTTATAATTATGGCAATGTACATTATGTTATTA
TCAATCGTAATTATACATTCTCGCCATTCTCGCCTTATATCAGGAAAATC
CCGTAAAGACAGGAGTTGGCATCTCGGAGCACACTGACTTCGAAGTAATA
ACGGTGATGCACGAAGACAGTCCCGGCCTCTGGCTACGGTCTCCTGGCGC
TGAACCTTGCTGGTACCAACCTCCGTTTCGACCCGACGTCCTCACGGTTA
TTCTTGGGGTGGGTTCTATTCAATAGTACTTCTACTGATACTACTTGGTA
CTCCAACGCTTCAACAACTCCACTGTTGTACCATACTACTATCCTATCTC
CTATCGTGTTTGGAAAGCAACCACTGTACTTGCCTAACAACCATAACTCT
TTTTAATGCACCTCCACCCCCACGTCAACACGTTGCTTGAGTTTCCAAAA
CTCTTGGATTTCGGTTCGTCATATTGTGGCGATCATTGAGTATAGGCGCC
TTCCGCGGTTAAGCGTCATGGATTTTTAGAGGGGGGTGGTTATGAAGTAT
CCCCGGCTAAGGTCTAAAATATATATATCACGTCTACCTTGGGGCATGAG
ATGGGCATATTAAACAAATTATATATCTATATAGATATATAGATATAATT
ACATCCATGTTTGTTCCCGGGTTTCAACTGGTTTCATGCTTATCCCTGGG
AAATTCCACAAAAAGCAAAAAGCGGGGATGGACTGAATAAATGCCCACGT
CAGATTACGCCAACATTTCCAGGGTACTGCAATACTAGGGTGGGAATCAC
GAGTCCGTGGTCGAGTTTTTTTTTTACATATCGACATTGCCCGGAAAAGC
ATCATTTAAAACACACGACAAAATTGACACTCAGATTCAGGGGCGTTCAT
GATCGAGCCTCTACCCATCTGAATTTTTGTCTGAACAACTTTTTTAGTGG
CTCTACCCTCTGCCCATCTAAATTGGCCAATCGCAAGTAATTGCTGAGGT
GCCCATGAAAAACAAAGCTCGGGAATGCGGCTAAAAAAAATCGCGGCAAT
CCCAAACCGTTTTTTATTTCAACAACTTTTTTGACGACAGTGCTGGGTTC
TTCAGAAGGAATAAAAAACGATTTTTGATGTATTAATGTTTTTAGATGGG
CAGGGCCAAGGACGTTTAACCGCGGAAGTATGTTATATTATGCCTAAATT
ACATTACATTACACCTACGATACTCAAACCGGTCGTGCAGCAAGCTCCAA
TTAGCTGCCTTACCTGTGAGATTGTATCCGAAATTCGTCAGAAAATTCTA
ACTCAGTAATAGTTTCGTACCGTACATCGCAAAGCAAATAGGTCTTTCAG
TGTATGTTCTCTCTGTGTTTCTTGAAGACGATCAAGTAATGGTACGATTA
ATTGTTCAAACTATCTTGGGCTCGGTCACGTCGGCCACGGTTATGGTGTC
CGAAAATTGAAACGTCTGATTTTACTGCACTCCTGTCTAGCCTCTCAAGT
CGATCTTTATTGGTCCGAGCTATAGAAAAAGCACAGCAAAGATTATACAC
ATCTGCAGTTGTACCACCGCTGAATGACTCTGCTGGCGCTACTCGTGACA
CTTTTCCAGGACATGGCAGAGTTATGGACGGCGGGATGGTTGGAAGCGAC
CTCTCACAAAGTAATATCCCCCAAACTAGGACAAGGGGCGCGCAAGTCAC
TTGTTCTCTTTCAGGCCCATGATGACCTAGTTAGAGTCCATCCACTGAAG
GTTGACCATCTGGACCAATTGGATAGACACCGACAAGAAAGTGAGGCGAG
AAATGCTGAAGTTCAAGGCTCACGGAAGTATAATCTGCGCTCGAGGGCGA
AACATTCGGAACGCCGTCTCATGTCGAAAGTTGATGACGTTCATCGTACC
GAAATCAATTTTCAGGACTGGCTTGCTCATCGTCCAGAGGCTATCCTGAG
AAAGTACCCTCCAACTAGTCAAGGGGTGTGGGTTCGAGAGAAAGAGCAAA
TAGCCAAGTCTGCCTCGTTACGATTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig17446:399..6277+

>mRNA_H-elongata_contig17446.4535.1 ID=mRNA_H-elongata_contig17446.4535.1|Name=mRNA_H-elongata_contig17446.4535.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1938bp|location=Sequence derived from alignment at H-elongata_contig17446:399..6277+ (Himanthalia elongata Himel1 dioecious)
GGAAAGGAGCCGGCGTATGTGGAGGGAGAAAGGCAGCACGTGGAGAGCTT
CAGCTGCACAAGGCCTCTAGAGTTGGCTTTCGATCCACACCCTCGCAGCC
ACCTGCATCGAGGGCATGATGATAAGGGAAAGGAGCCGGCGTATGTGGAG
GGAGAAAGGCAGCACGTGGAGAGCTTCAGCTGCACAAGGCCTCTAGAGTT
GGCTTTCGATCCACACCCTCGCAGCCACCTGCATCGAGGGCATGATGATA
AGTTCTTCCACCGTAACCTGTTCCCAGACGATCATGTCCATGGGTATGGA
GAGGCGTACACATCCTTGTGGAAGGTGTTCACCGAGCGAGTTACTCTCCC
AATGATAATGGCTCTGGAGGTGATGCTGTGCTTACCCCCAGTTCTTCCAC
CGTAACCTGTTCCCAGACGATCATGTCCATGGGTATGGAGAGGCGTACAC
ATCCTTGTGGAAGGTGTTCACCGAGCGAGTTACTCTCCCAATGATAATGG
CTCTGGAGGTGATGCTGTGCTTACCCCCAGGTTTTCTGATGCACAAGAGT
GGAGGAATGGACAGCCTAAACATGTCACTCCTTCGATCCCTACACTACCC
TCCCGGAGGTGGTGAGGCATCATTCTCGTCCACTACCGAAGTAAGTCAGG
TTTTCTGATGCACAAGAGTGGAGGAATGGACAGCCTAAACATGTCACTCC
TTCGATCCCTACACTACCCTCCCGGAGGTGGTGAGGCATCATTCTCGTCC
ACTACCGAAGTAAGTCAGGAAAATCCCGTAAAGACAGGAGTTGGCATCTC
GGAGCACACTGACTTCGAAGTAATAACGGTGATGCACGAAGACAGTCCCG
GCCTCTGGCTACGGTCTCCTGGCGCTGAACCTTGCTGGTACCAACCTCCG
TTTCGACCCGACGTCCTCACGGTTATTCTTGGGGAAAATCCCGTAAAGAC
AGGAGTTGGCATCTCGGAGCACACTGACTTCGAAGTAATAACGGTGATGC
ACGAAGACAGTCCCGGCCTCTGGCTACGGTCTCCTGGCGCTGAACCTTGC
TGGTACCAACCTCCGTTTCGACCCGACGTCCTCACGGTTATTCTTGGGGA
CATGGCAGAGTTATGGACGGCGGGATGGTTGGAAGCGACCTCTCACAAAG
TAATATCCCCCAAACTAGGACAAGGGGCGCGCAAGTCACTTGTTCTCTTT
CAGGCCCATGATGACCTAGTTAGAGTCCATCCACTGAAGGTTGACCATCT
GGACCAATTGGATAGACACCGACAAGAAAGTGAGGCGAGAAATGCTGAAG
TTCAAGGCTCACGGAAGTATAATCTGCGCTCGAGGGCGAAACATTCGGAA
CGCCGTCTCATGTCGAAAGTTGATGACGTTCATCGTACCGAAATCAATTT
TCAGGACTGGCTTGCTCATCGTCCAGAGGCTATCCTGAGAAAGTACCCTC
CAACTAGTCAAGGGGTGTGGGTTCGAGAGAAAGAGCAAATAGCCAAGTCT
GCCTCGTTACGATTGTGAGACATGGCAGAGTTATGGACGGCGGGATGGTT
GGAAGCGACCTCTCACAAAGTAATATCCCCCAAACTAGGACAAGGGGCGC
GCAAGTCACTTGTTCTCTTTCAGGCCCATGATGACCTAGTTAGAGTCCAT
CCACTGAAGGTTGACCATCTGGACCAATTGGATAGACACCGACAAGAAAG
TGAGGCGAGAAATGCTGAAGTTCAAGGCTCACGGAAGTATAATCTGCGCT
CGAGGGCGAAACATTCGGAACGCCGTCTCATGTCGAAAGTTGATGACGTT
CATCGTACCGAAATCAATTTTCAGGACTGGCTTGCTCATCGTCCAGAGGC
TATCCTGAGAAAGTACCCTCCAACTAGTCAAGGGGTGTGGGTTCGAGAGA
AAGAGCAAATAGCCAAGTCTGCCTCGTTACGATTGTGA
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