mRNA_H-elongata_contig17337.4498.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17337.4498.1
Unique NamemRNA_H-elongata_contig17337.4498.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: D8LTJ7_ECTSI (Myosin IA heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ7_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 1.980e-86
Identity = 134/157 (85.35%), Postives = 141/157 (89.81%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            + LR R   GDMYTSIGPVLIAVNPY QLS GGKGIY SGV DY+HRKGG  G FMAPHIYR+AAEA+K+L AD+RDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSS  QKA MEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQF+FK
Sbjct:   75 EVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGG--GDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFK 229
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A6H5KZ38_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ38_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.040e-78
Identity = 134/157 (85.35%), Postives = 141/157 (89.81%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            + LR R   GDMYTSIGPVLIAVNPY QLS GGKGIY SGV DY+HRKGG  G FMAPHIYR+AAEA+K+L AD+RDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSS  QKA MEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQF+FK
Sbjct:   77 EVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGG--GDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFK 231
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: F0YAR1_AURAN (Myosin motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAR1_AURAN)

HSP 1 Score: 166 bits (419), Expect = 7.020e-45
Identity = 88/155 (56.77%), Postives = 108/155 (69.68%), Query Frame = 1 
Query:    7 LRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            L  RY  G+MYT IGPVLIAVNPY  L K G  IY  GV  +++ K       + PH+Y +AAEA K + +  ++QCV+V+GESGAGKTE AKQLM FV  +     G  A +E  ++ LL+SNP+LEAFGNAQT+RNDNSSRFGKYMEL F FK
Sbjct:   40 LSARYRRGEMYTCIGPVLIAVNPYKLLEKQGS-IYRDGVARFYYDKTPLE---VTPHVYSVAAEALKGMRSKRQNQCVLVSGESGAGKTETAKQLMQFVAIIS----GGGATLEATKQQLLDSNPVLEAFGNAQTVRNDNSSRFGKYMELSFDFK 186
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A8C6IQS5_MELUD (Myosin motor domain-containing protein n=1 Tax=Melopsittacus undulatus TaxID=13146 RepID=A0A8C6IQS5_MELUD)

HSP 1 Score: 147 bits (371), Expect = 4.510e-42
Identity = 83/159 (52.20%), Postives = 111/159 (69.81%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMA--PHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            +TLR+R+  GD+YT IG VLI+VNPY  L      IY    +  +H        F A  PHIY IA +A+++L    RDQC+++TGESGAGKTEA+K +M +V  V  SS G++  ++ V+  LL+SNP+LEAFGNA+TIRNDNSSRFGKYM+++F FK
Sbjct:   29 RTLRERFRRGDIYTYIGNVLISVNPYEPLP-----IYTPEKVQEYHNCN-----FFAVKPHIYAIADDAYRSLRDRDRDQCILITGESGAGKTEASKLVMSYVAAV--SSKGEE--VDKVKEQLLQSNPVLEAFGNAKTIRNDNSSRFGKYMDVEFDFK 173
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A7S2RIZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIZ1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.550e-41
Identity = 76/148 (51.35%), Postives = 100/148 (67.57%), Query Frame = 1 
Query:   34 MYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVG--TSSVGQKAM-MEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSF 468
            MYTSIG VL+AVNPY  L K GK IY+     ++      G   + PH++  +AEA+  L    + QC+++TGESGAGKTE AK ++ FVT V   +S   Q    +E V++ LL S+P+LEAFGNA+T+RNDNSSRFGKYMELQF +
Sbjct:   16 MYTSIGAVLVAVNPYKVLVKAGKPIYDDSFARHYMEHDRLG---LVPHVFSTSAEAYVALTRSQQSQCILITGESGAGKTETAKHVLQFVTVVSPESSRAAQAGRSVEAVKQQLLNSSPLLEAFGNAKTVRNDNSSRFGKYMELQFDY 160
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: F0Y138_AURAN (Myosin motor domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y138_AURAN)

HSP 1 Score: 155 bits (393), Expect = 5.120e-41
Identity = 86/155 (55.48%), Postives = 102/155 (65.81%), Query Frame = 1 
Query:    7 LRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            L  RY   +MYT+IG VLIAVNPY  L +GGK IY   V  ++     A      PHI+ + A A+  L  D  DQCV+VTGESGAGKTEAAKQLM+FVT        +K     V+  LL SNP+LEA GNA+T+RNDNSSRFGKYMELQF F+
Sbjct:   22 LSARYKRDEMYTAIGEVLIAVNPYRVLERGGKSIYGEDVALHYQE---AILHLQKPHIFGVGAAAYNALVRDGEDQCVLVTGESGAGKTEAAKQLMNFVTVAA-----KKHSAADVKDKLLMSNPVLEALGNAKTVRNDNSSRFGKYMELQFDFR 168
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A8J5UQK2_9HYME (Myosin motor domain-containing protein n=1 Tax=Cotesia typhae TaxID=2053667 RepID=A0A8J5UQK2_9HYME)

HSP 1 Score: 141 bits (355), Expect = 1.940e-39
Identity = 73/158 (46.20%), Postives = 108/158 (68.35%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAP-HIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            + LRKR+    +YT IG VL++VNPY  L      IY++  ++Y+ R+      F AP HI+ +A  A++ L  + RDQC++++GESG+GKTEA+K+++ F+     ++ G K  +E V   L+ SNP+LEAFGNA+T RNDNSSRFGKYM++QF F+
Sbjct:   53 ENLRKRFRENLIYTYIGQVLVSVNPYKWLP-----IYDTSTIEYYERRNF----FEAPPHIFALADTAYRALTKENRDQCILISGESGSGKTEASKKVLEFIA----AATGHKKQVEAVNVKLIGSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFQ 197
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A835YR46_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR46_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.130e-39
Identity = 85/157 (54.14%), Postives = 102/157 (64.97%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            + L  R    DMYTSIG                     +GV  ++  +G       APHI+RI A+A + L A+  +Q +IVTGESGAGKTEAAKQLM FVT VGT++  Q+  ME V+R LLESNP+LEAFGNAQTIRNDNSSRFGK MELQFS+K
Sbjct:   42 ELLETRLRRQDMYTSIG---------------------NGVAKHYFAQGST---HTAPHIFRIGADALRALAANRENQAIIVTGESGAGKTEAAKQLMQFVTVVGTTTDAQRERMETVKRQLLESNPVLEAFGNAQTIRNDNSSRFGKLMELQFSYK 174
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A1V4JCP7_PATFA (Unconventional myosin-Ia n=4 Tax=Neognathae TaxID=8825 RepID=A0A1V4JCP7_PATFA)

HSP 1 Score: 150 bits (380), Expect = 2.860e-39
Identity = 84/159 (52.83%), Postives = 111/159 (69.81%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMA--PHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSFK 471
            QTL++R+  GD+YT IG VLI+VNPY  L      IY    +  +H        F A  PHIY IA +A+ +LC   RDQC+++TGESGAGKTEA+K +M +V  V  SS G++  ++ V+  LL+SNP+LEAFGNA+TIRNDNSSRFGKYM+++F FK
Sbjct:   29 QTLQERFHRGDIYTYIGNVLISVNPYRPLP-----IYTPEKVQEYHNCN-----FFAVKPHIYAIADDAYHSLCDRDRDQCILITGESGAGKTEASKLVMSYVAAV--SSKGEE--VDKVKEQLLQSNPVLEAFGNAKTIRNDNSSRFGKYMDVEFDFK 173
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BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Match: A0A152A2Q9_9MYCE (Myosin IA heavy chain n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2Q9_9MYCE)

HSP 1 Score: 150 bits (379), Expect = 3.880e-39
Identity = 76/156 (48.72%), Postives = 112/156 (71.79%), Query Frame = 1 
Query:    1 QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGGAGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFSF 468
            Q L++RY  G +YTSIGPVLI++NPY QL     GIY +  +D +  K       + PH+++IA +A++ L A+  +QC+I++GESGAGKTE +K +M ++  +     G  A +E V++ +LESNP+LEAFGNA+T+RN+NSSRFGKYME+QF++
Sbjct:   34 QNLQQRYKEGLIYTSIGPVLISINPYKQL-----GIYGNDSIDLYRGKHEFE---IPPHVFKIADKAYRALKAERENQCIIISGESGAGKTETSKYIMQYIANI----TGSSAEVERVKKLILESNPLLEAFGNAKTLRNNNSSRFGKYMEIQFNY 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17337.4498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ7_ECTSI1.980e-8685.35Myosin IA heavy chain n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5KZ38_9PHAE1.040e-7885.35Myosin motor domain-containing protein n=1 Tax=Ect... [more]
F0YAR1_AURAN7.020e-4556.77Myosin motor domain-containing protein (Fragment) ... [more]
A0A8C6IQS5_MELUD4.510e-4252.20Myosin motor domain-containing protein n=1 Tax=Mel... [more]
A0A7S2RIZ1_9STRA1.550e-4151.35Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F0Y138_AURAN5.120e-4155.48Myosin motor domain-containing protein n=1 Tax=Aur... [more]
A0A8J5UQK2_9HYME1.940e-3946.20Myosin motor domain-containing protein n=1 Tax=Cot... [more]
A0A835YR46_9STRA2.130e-3954.14P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1V4JCP7_PATFA2.860e-3952.83Unconventional myosin-Ia n=4 Tax=Neognathae TaxID=... [more]
A0A152A2Q9_9MYCE3.880e-3948.72Myosin IA heavy chain n=1 Tax=Tieghemostelium lact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17337contigH-elongata_contig17337:217..1489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.1
Seed ortholog evalue8.4e-68
Seed eggNOG ortholog2880.D8LTJ7
Preferred nameMYO1D
KEGG koko:K10356
GOsGO:0000003,GO:0000041,GO:0000146,GO:0000166,GO:0001726,GO:0001891,GO:0002009,GO:0002165,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003008,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005730,GO:0005737,GO:0005768,GO:0005769,GO:0005783,GO:0005790,GO:0005829,GO:0005856,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005938,GO:0006605,GO:0006612,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006909,GO:0006911,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007498,GO:0007548,GO:0007552,GO:0007560,GO:0007600,GO:0007605,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008154,GO:0008289,GO:0009267,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009791,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009893,GO:0009925,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010324,GO:0010468,GO:0010563,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010921,GO:0010923,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015682,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016323,GO:0016324,GO:0016328,GO:0016459,GO:0016461,GO:0016462,GO:0016477,GO:0016482,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017076,GO:0017111,GO:0017160,GO:0019220,GO:0019222,GO:0019899,GO:0019904,GO:0022414,GO:0022607,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030011,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030033,GO:0030034,GO:0030036,GO:0030041,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030139,GO:0030175,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030539,GO:0030554,GO:0030587,GO:0030659,GO:0030673,GO:0030705,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030898,GO:0030900,GO:0031090,GO:0031143,GO:0031152,GO:0031252,GO:0031253,GO:0031256,GO:0031260,GO:0031267,GO:0031272,GO:0031273,GO:0031275,GO:0031276,GO:0031323,GO:0031324,GO:0031334,GO:0031344,GO:0031345,GO:0031410,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031941,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032009,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032420,GO:0032421,GO:0032501,GO:0032502,GO:0032528,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032587,GO:0032589,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033267,GO:0033554,GO:0033572,GO:0034097,GO:0034341,GO:0034613,GO:0034622,GO:0035091,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035295,GO:0035303,GO:0035305,GO:0035639,GO:0035924,GO:0036094,GO:0036477,GO:0038084,GO:0038089,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0040012,GO:0040017,GO:0040029,GO:0042221,GO:0042330,GO:0042594,GO:0042623,GO:0042742,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043086,GO:0043167,GO:0043168,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043325,GO:0043327,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044291,GO:0044297,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045056,GO:0045087,GO:0045121,GO:0045160,GO:0045177,GO:0045178,GO:0045184,GO:0045335,GO:0045815,GO:0045936,GO:0046661,GO:0046903,GO:0046907,GO:0048193,GO:0048306,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048565,GO:0048569,GO:0048583,GO:0048584,GO:0048608,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050900,GO:0050954,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051130,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051258,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055123,GO:0060171,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060491,GO:0060562,GO:0061024,GO:0061458,GO:0061502,GO:0061572,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070685,GO:0070686,GO:0070727,GO:0070848,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071363,GO:0071496,GO:0071702,GO:0071705,GO:0071840,GO:0071907,GO:0071944,GO:0071976,GO:0072512,GO:0072657,GO:0072676,GO:0072678,GO:0090066,GO:0090087,GO:0090150,GO:0090287,GO:0090313,GO:0090314,GO:0090316,GO:0090598,GO:0090702,GO:0097159,GO:0097367,GO:0097435,GO:0097440,GO:0097447,GO:0097458,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099568,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120035,GO:0120036,GO:0120038,GO:0120117,GO:0150034,GO:1900076,GO:1900078,GO:1900746,GO:1900748,GO:1901265,GO:1901363,GO:1901888,GO:1901981,GO:1902547,GO:1902903,GO:1902905,GO:1902936,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:2000145,GO:2000147,GO:2000810
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0164@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03036,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMyosin head, motor domain
Ec32 orthologEc-02_005860.1
Exons2
Model size471
Cds size471
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.2693808-CDS-H-elongata_contig17337:216..3541622930008.2693808-CDS-H-elongata_contig17337:216..354Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17337 217..354 -
1691679243.8063445-CDS-H-elongata_contig17337:216..3541691679243.8063445-CDS-H-elongata_contig17337:216..354Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17337 217..354 -
1622930008.284718-CDS-H-elongata_contig17337:1156..14891622930008.284718-CDS-H-elongata_contig17337:1156..1489Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17337 1157..1489 -
1691679243.8196907-CDS-H-elongata_contig17337:1156..14891691679243.8196907-CDS-H-elongata_contig17337:1156..1489Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17337 1157..1489 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17337.4498.1prot_H-elongata_contig17337.4498.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17337 217..1489 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17337.4498.1

>prot_H-elongata_contig17337.4498.1 ID=prot_H-elongata_contig17337.4498.1|Name=mRNA_H-elongata_contig17337.4498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
QTLRKRYVSGDMYTSIGPVLIAVNPYTQLSKGGKGIYESGVMDYFHRKGG
AGGGFMAPHIYRIAAEAFKNLCADARDQCVIVTGESGAGKTEAAKQLMHF
VTTVGTSSVGQKAMMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYM
ELQFSFK
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mRNA from alignment at H-elongata_contig17337:217..1489-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17337.4498.1 ID=mRNA_H-elongata_contig17337.4498.1|Name=mRNA_H-elongata_contig17337.4498.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1273bp|location=Sequence derived from alignment at H-elongata_contig17337:217..1489- (Himanthalia elongata Himel1 dioecious)
CAGACGCTGCGGAAGAGATACGTCTCCGGAGACATGTACACATCAATCGG
GCCTGTGTTAATCGCCGTCAACCCTTACACCCAGCTCTCTAAGGGCGGCA
AGGGCATCTACGAATCCGGCGTGATGGACTACTTTCACCGAAAGGGCGGA
GCCGGGGGCGGGTTCATGGCGCCGCACATCTACCGCATCGCGGCGGAGGC
CTTTAAGAACCTGTGCGCCGACGCTCGTGATCAGTGCGTCATCGTGACGG
GAGAGTCGGGCGCGGGAAAGACCGAGGCCGCGAAGCAGTTGATGCATTTT
GTCACCACCGTCGGCACATCCAGCGTCGGACAGGTACTGTAAGGATTGGT
TTGATCAATTGTTTGATTGATCGAGATCAAATAAAGCATAGGTCGACGCT
GCTGTTGCGGTATTTCCTTCCTCTCGCTCTCTCCCCTCCCCCCTCCTCGC
TCGCTCGCTCGCTCTCTCTGCGGGCCGTGACGAAAGAGTCTGGGAGTTCC
TTCTAGATGACGTTACGATACTCCGTGTGGGTGAGCTGTGCATCAAGGAA
GAGGGCGCTCTCGAGTTTTGCATGCCTTGGCTATTTGACCATCAGAGACG
CGTTCTCGAGAGGAAAAAAAGGGACGGTGTGAGGGGCTGTTTAATTTGCT
GTGTCGGCACACCCTGCGGCTTTGTAGCGGGATCTGTGTACCGAGGGGGC
TTTCCGTAAGTATGACGTGTGGGACCGTGGGGGCTCGCGGTATTTCTGAA
CGCGATGTATAGAGAGCGATGTATGGAATGGGCCGTTTCCTGCATCGATT
CCATTAAAACGTCTCTCGAAACTACTGCGCGATCTTTCTGGTGGCGCCGA
GCACGATTGATCACGATTGATCGTGGTTTCCTCCCCTGCTTGTCCCCCAA
AAACATTCCATTCGAAGTATTAACTGGATATTGTCTTCTTCACGCGCGGC
AGAGGGCTACATTCACGCGGGTGGCGTACACCCCTCGGACTCCATGTGCG
CAAGCCGTTGTCATTCCTATTGTGCTCGGCCTAAAAATCGCATGTGAATA
TCGCTAATGGCGGCACGCCTGTGGTGCATGTGCTAATATACTAACTGGAA
GTATTTTGTCCTGCCGCCGTCGCCGCCGTGAACAGAAAGCCATGATGGAA
GGTGTGCAGCGACATCTGCTGGAGTCTAATCCAATCCTCGAGGCTTTCGG
CAACGCACAGACCATCCGCAACGACAACTCCAGTCGGTTTGGGAAATACA
TGGAGCTGCAATTCTCGTTCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig17337:217..1489-

>mRNA_H-elongata_contig17337.4498.1 ID=mRNA_H-elongata_contig17337.4498.1|Name=mRNA_H-elongata_contig17337.4498.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig17337:217..1489- (Himanthalia elongata Himel1 dioecious)
CAGACGCTGCGGAAGAGATACGTCTCCGGAGACATGTACACATCAATCGG
GCCTGTGTTAATCGCCGTCAACCCTTACACCCAGCTCTCTAAGGGCGGCA
AGGGCATCTACGAATCCGGCGTGATGGACTACTTTCACCGAAAGGGCGGA
GCCGGGGGCGGGTTCATGGCGCCGCACATCTACCGCATCGCGGCGGAGGC
CTTTAAGAACCTGTGCGCCGACGCTCGTGATCAGTGCGTCATCGTGACGG
GAGAGTCGGGCGCGGGAAAGACCGAGGCCGCGAAGCAGTTGATGCATTTT
GTCACCACCGTCGGCACATCCAGCGTCGGACAGCAGACGCTGCGGAAGAG
ATACGTCTCCGGAGACATGTACACATCAATCGGGCCTGTGTTAATCGCCG
TCAACCCTTACACCCAGCTCTCTAAGGGCGGCAAGGGCATCTACGAATCC
GGCGTGATGGACTACTTTCACCGAAAGGGCGGAGCCGGGGGCGGGTTCAT
GGCGCCGCACATCTACCGCATCGCGGCGGAGGCCTTTAAGAACCTGTGCG
CCGACGCTCGTGATCAGTGCGTCATCGTGACGGGAGAGTCGGGCGCGGGA
AAGACCGAGGCCGCGAAGCAGTTGATGCATTTTGTCACCACCGTCGGCAC
ATCCAGCGTCGGACAGAAAGCCATGATGGAAGGTGTGCAGCGACATCTGC
TGGAGTCTAATCCAATCCTCGAGGCTTTCGGCAACGCACAGACCATCCGC
AACGACAACTCCAGTCGGTTTGGGAAATACATGGAGCTGCAATTCTCGTT
CAAGAAAGCCATGATGGAAGGTGTGCAGCGACATCTGCTGGAGTCTAATC
CAATCCTCGAGGCTTTCGGCAACGCACAGACCATCCGCAACGACAACTCC
AGTCGGTTTGGGAAATACATGGAGCTGCAATTCTCGTTCAAG
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