mRNA_H-elongata_contig17021.4348.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A6H5K9B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B8_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.410e-67 Identity = 127/269 (47.21%), Postives = 151/269 (56.13%), Query Frame = 1
Query: 1 FDDIFLAPPGTSVTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLT-----NVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERR----LVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVMSPVL----------VSSALEDDTSQKTRIRTERQEL--------------------HPKASAISTQAGCSIQTVFPSRGIWIGGETAERHPCRPMTTYEKKAKTAGRRVRDFRYRLELPI 690
FD IF A PG ++T DIGFGSGESL+EMA RP E+FVGIE H A RL NVK+ GDA+T L DH+ED SL CCIFFPDPFP D+ERR LVRPLLL+LL+SK+QPGG L +ATDV+ YA H +RVMS SS + T+ Q+L P+ + G S + V G W+GGETAER RP T YE+KA+ AGRRVRDF YRLELP+
Sbjct: 7 FDQIFAAAPGAALTFDIGFGSGESLIEMAAMRPKENFVGIEV------HKPGVAAALARLEAEGLPNVKIAQGDAITALADHIEDWSLSSCCIFFPDPFPQDRDTERREVLRLVRPLLLNLLASKLQPGGTLHVATDVDGYAKHTVRVMSTWTPEKRPKAARPTSSTMRSGTAAAEDTELGFQQLGGVHREEQIQGEEFADGMRGEPQQQQRAGSNGDSTRLVSEVSGCWVGGETAERPSWRPFTKYEEKAREAGRRVRDFSYRLELPV 269
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: D8LNW3_ECTSI (tRNA (Guanine-N(7)-)-methyltransferase trmB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW3_ECTSI) HSP 1 Score: 219 bits (558), Expect = 9.960e-67 Identity = 128/264 (48.48%), Postives = 151/264 (57.20%), Query Frame = 1
Query: 1 FDDIFLAPPGTSVTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLT-----NVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVMSP----------------VLVSSALEDDTS----QKTRIRTERQELH----------PKASAISTQAGCSIQTVFPSRGIWIGGETAERHPCRPMTTYEKKAKTAGRRVRDFRYRLELP 687
FD IF A G +VT DIGFGSGESL+EMA RP E+FVGIE H A RL NVK+ GDA+T L DH+ED SL CCIFFPDPFP D+ERRLVRPLLLSLL+SK+QPGG L +ATDV+ YA+H +RVMS + +A +DT Q +R E Q P+ + G S + V W+GGETAER RP T YE+KA+ AGR VRDF YRLELP
Sbjct: 106 FDQIFAAETGAAVTFDIGFGSGESLVEMAAMRPKENFVGIEV------HKPGVAAALARLEAEGLPNVKIAQGDAITALADHIEDGSLSSCCIFFPDPFPQDRDTERRLVRPLLLSLLASKLQPGGTLHVATDVDGYAEHTVRVMSTWTPEKRPNTARPSSSTMPSGTAAAEDTELGFQQLGGVRREEQRQGEEIADVMRGGPQQQQRAGSNGDSARLVSEVSACWVGGETAERPSWRPFTKYEEKAREAGRSVRDFAYRLELP 363
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A2G6DAC5_9PROT (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6DAC5_9PROT) HSP 1 Score: 116 bits (291), Expect = 1.690e-28 Identity = 69/183 (37.70%), Postives = 102/183 (55.74%), Query Frame = 1
Query: 37 VTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVMSPVLVSSALEDDTSQKTRIRTERQELHPKASAISTQAGCSIQTVFPSRGIWIGGE 585
VTL+IGFG+G+SL +MA A P F+GIE H H H L+NV+VV DA+ V+ + D SLD I+FPDP+ + ++RR+++P ++LL++K+Q GGVL +ATD E+YA ++ VM+ +A + T ER + P T F +RGI +G E
Sbjct: 56 VTLEIGFGNGDSLAQMAAAAPERDFIGIEVHRPGVGHVLHLVGEHE-LSNVRVVNHDAVEVMNRMIPDGSLDRVQIYFPDPWHKARHNKRRIIKPEFVALLATKLQKGGVLHLATDWEDYAIQMLEVMT-----AAADYKNQSATGTYAERPDYRPL-------------TKFENRGIKLGHE 219
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: D1KCW1_9GAMM (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=uncultured SUP05 cluster bacterium TaxID=655186 RepID=D1KCW1_9GAMM) HSP 1 Score: 113 bits (283), Expect = 2.460e-27 Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 1
Query: 37 VTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVMSPVLVSSALEDDTSQKTRIRTERQELHPKASAIS 522
+TL+IGFG+G+SLLEMA P ++F+GIE + H+ LTN+K++ DA+ VL H++D S + +FFPDP+ +RR+V+ + L L+S+K+Q GG + IATD E YA H++ LED T K + + PK I+
Sbjct: 54 ITLEIGFGNGDSLLEMAIVAPNQNFLGIEVYEAGVGRLINEAHKHQ-LTNLKIIKADAVEVLKHHIKDNSFETFQLFFPDPWHKKKHHKRRIVQTVFLDLISNKLQDGGTIHIATDWENYAQHMMET---------LEDHTHFKNALGAHTYSVRPKHRPIT 205
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A7C5KVB3_9GAMM (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5KVB3_9GAMM) HSP 1 Score: 113 bits (283), Expect = 2.850e-27 Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 4 DDIFLAPPGTSVTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVM 420
D L PPG +VTL+IGFG+G+SL EMA A P ++GIE T R + NV++ DA+ VL V D LD ++FPDP+P +RR+V+P ++LL+ K++PGG+L +ATD YA+H++ VM
Sbjct: 49 DPAALVPPGAAVTLEIGFGNGDSLAEMAAADPGGFYLGIEVHRPGVGRLLKTL-DERGIDNVRLYCHDAVEVLEQRVPDAWLDRVLLYFPDPWPKKKHHKRRIVQPPFVALLARKLKPGGLLHMATDWAPYAEHMLEVM 186
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A5C7RB05_9GAMM (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A5C7RB05_9GAMM) HSP 1 Score: 112 bits (281), Expect = 5.230e-27 Identity = 64/181 (35.36%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 37 VTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVMSPVLVSSALEDDTSQKTRIRTERQELHPKASAISTQAGCSIQTVFPSRGIWIG 579
VTL+IGFG+GESL EMA A P +F+GIE + H H H+ LTNV+V+ DA+ ++ + + SL+ I+FPDP+ ++RR+++ +SLL++++Q GG+L +ATD ++YA+ + VM + E Q L+P A S + T F RG+ +G
Sbjct: 56 VTLEIGFGNGESLAEMALAAPERNFLGIEVHTPGVGHLLHLVQKHQ-LTNVRVMNTDAVEIIQQRIPEASLNRVQIYFPDPWHKKRHNKRRIIQAEFVSLLATRLQHGGLLHLATDWQDYAEAMAEVM-----------------QASPEFQTLNPSGEAFSPRPEFRPLTKFEQRGVKLG 218
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A7K4E2H5_9EURY (tRNA (Guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4E2H5_9EURY) HSP 1 Score: 112 bits (279), Expect = 6.340e-27 Identity = 56/127 (44.09%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 40 TLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVM 420
TL+IGFG+G SL MA P F+GIE H R L NV+++ GDA+ VL D + D SLD +FFPDP+P +RR+++P + LL+ K++PGG+L +ATD E YA+H++ VM
Sbjct: 26 TLEIGFGNGASLATMAEQEPDIDFIGIEVHRPGVGHLL-LELERRGLKNVRIICGDAVQVLRDSLPDSSLDRVLLFFPDPWPKKRHHKRRIIQPGFIDLLARKLKPGGILHMATDWENYAEHMLVVM 151
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A2T5P999_9PSED (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Pseudomonas mangrovi TaxID=2161748 RepID=A0A2T5P999_9PSED) HSP 1 Score: 110 bits (276), Expect = 3.460e-26 Identity = 59/127 (46.46%), Postives = 81/127 (63.78%), Query Frame = 1
Query: 40 TLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVM 420
TL+IGFG G+SLLEMA A P E F+GIE A + L+NV+V DAL VL + D SLD +FFPDP+ + ++RR+V+P L+ SK++PGGVL +ATD + YA+H++ VM
Sbjct: 65 TLEIGFGMGQSLLEMAAAAPQEDFIGIEVHRPGVGALLSGLLA-QDLSNVRVYACDALEVLRQCIADASLDRVLLFFPDPWHKARHNKRRIVQPAFAELVRSKLKPGGVLHMATDWQPYAEHMLEVM 190
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A7C1D132_9GAMM (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1D132_9GAMM) HSP 1 Score: 110 bits (274), Expect = 5.660e-26 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 37 VTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVM 420
VTL+IGFG+G SL +MA A PA+ F+GIE H L NV+V+ DA+ VL HV D SLD +FF DP+P +RR+V+P + L++ K++PGG+ +ATD E YA+H+ VM
Sbjct: 57 VTLEIGFGNGASLAQMAAADPAQLFIGIEVHRPGVGHLLQLV-EKGGLENVRVICEDAVEVLKLHVPDASLDRLLLFFADPWPKKRHHKRRIVQPKFVELVAKKLKPGGIFHMATDWENYAEHMREVM 183
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Match: A0A426QIT8_9GAMM (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thiohalobacter thiocyanaticus TaxID=585455 RepID=A0A426QIT8_9GAMM) HSP 1 Score: 109 bits (273), Expect = 9.350e-26 Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 40 TLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPYHTTCAHRRLTNVKVVLGDALTVLCDHVEDRSLDECCIFFPDPFPLSGDSERRLVRPLLLSLLSSKMQPGGVLRIATDVEEYADHVIRVM 420
TL+IGFG+G SL EMA A P + F+GIE H A R LTNV+V+ DA+ VL D + + SL ++FPDP+P +RR+++P ++L + ++ PGGV +ATD E+YA ++ VM
Sbjct: 54 TLEIGFGNGASLAEMAAAAPEQDFIGIEVHRPGVGHLLRLI-AERELTNVRVICADAVEVLRDAIPEASLSRVLLYFPDPWPKKKHHKRRILQPDFVALAARRLAPGGVFHLATDWEDYAGQMLEVM 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17021.4348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17021.4348.1 >prot_H-elongata_contig17021.4348.1 ID=prot_H-elongata_contig17021.4348.1|Name=mRNA_H-elongata_contig17021.4348.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp FDDIFLAPPGTSVTLDIGFGSGESLLEMATARPAESFVGIEASSLDPSHPback to top mRNA from alignment at H-elongata_contig17021:4464..5648- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17021.4348.1 ID=mRNA_H-elongata_contig17021.4348.1|Name=mRNA_H-elongata_contig17021.4348.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1185bp|location=Sequence derived from alignment at H-elongata_contig17021:4464..5648- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17021:4464..5648- >mRNA_H-elongata_contig17021.4348.1 ID=mRNA_H-elongata_contig17021.4348.1|Name=mRNA_H-elongata_contig17021.4348.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at H-elongata_contig17021:4464..5648- (Himanthalia elongata Himel1 dioecious)back to top |