mRNA_H-elongata_contig16972.4327.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: D7FKR7_ECTSI (L-galactono-1,4-lactone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR7_ECTSI) HSP 1 Score: 182 bits (461), Expect = 2.430e-52 Identity = 88/113 (77.88%), Postives = 98/113 (86.73%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRYARG 343
ELMRLIE EG+PAPAPIEQRWTSSS+A +SPAHD AS ET+FSWVGVIMYL A+D DAR+RVT+AF AYRDLCK RLWDRYDCAVHWAK+EKPR+ EA DT ARL RR+ G
Sbjct: 436 ELMRLIEREGIPAPAPIEQRWTSSSNATLSPAHDGASPETVFSWVGVIMYLPADDVDARKRVTEAFFAYRDLCKVRLWDRYDCAVHWAKIEKPRTAREAEDTRARLGRRFPVG 548
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: A0A835ZG22_9STRA (L-galactono-1,4-lactone dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG22_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.510e-32 Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 2
Query: 2 VELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
+E++ LIEE VPAPAPIEQRWT+ S+A MSPA + SWVG+IMYL +++A R +T AF YRDLCK +LWDRY+C HWAK+EKP + EAA ARL R Y
Sbjct: 371 LEVLALIEEGNVPAPAPIEQRWTAPSAARMSPARVAGG---VASWVGIIMYLPSDEARQRSDITRAFFEYRDLCKEKLWDRYECTEHWAKIEKPDTPEEAASLQARLRRHY 478
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: UPI001C4B9ABE (L-galactono-1,4-lactone dehydrogenase 1, mitochondrial-like n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B9ABE) HSP 1 Score: 119 bits (299), Expect = 1.060e-29 Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
EL +LIEEE VPAPAPIEQRWT+SS + MSPA E IFSWVG+IMYL D R+ +TD F +YR L + LWD+Y HWAK+E P+ + E A+ ARL +R+
Sbjct: 295 ELKKLIEEEEVPAPAPIEQRWTASSKSLMSPASSTGD-EDIFSWVGIIMYLPTTDPRQRKDITDEFFSYRHLTQTSLWDKYSAYEHWAKIEVPKKKEELAELQARLRKRF 403
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: A0A068V161_COFCA (FAD-binding PCMH-type domain-containing protein n=4 Tax=Coffea TaxID=13442 RepID=A0A068V161_COFCA) HSP 1 Score: 120 bits (302), Expect = 1.370e-29 Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
EL +LIE E VPAPAPIEQRWT+ S + MSPAH P + IFSWVG+IMYL DA R+++T+ F YR L +LWDRY HWAK+E P+ + E A ARL +R+
Sbjct: 464 ELTQLIERENVPAPAPIEQRWTACSKSFMSPAHSPVEDD-IFSWVGIIMYLPTTDARQRKQITEEFFHYRHLTYKQLWDRYSAYEHWAKIEVPKDKEELAALQARLRKRF 572
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: A0A6J1EAT5_CUCMO (L-galactono-1,4-lactone dehydrogenase 1, mitochondrial-like n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1EAT5_CUCMO) HSP 1 Score: 114 bits (285), Expect = 3.400e-29 Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
EL +LIE+E +PAPAPIEQRWT+ S + MSPA A + IFSWVG+IMYL DA R+ +T+ F YR L + LWD+Y HWAK+E P+ + E A ARL +R+
Sbjct: 95 ELKQLIEKENIPAPAPIEQRWTACSKSPMSPASSSAEDD-IFSWVGIIMYLPTSDARQRKEITEEFFHYRHLTQTLLWDQYSAFEHWAKIEVPKDKDELAALQARLRKRF 203
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: A0A118K1Y7_CYNCS (CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118K1Y7_CYNCS) HSP 1 Score: 119 bits (299), Expect = 3.680e-29 Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
++M LIE+E +PAPAPIEQRWT+SS + MSPA +S + IFSWVG+I+YL DA R+++T+ F YR L ++RLWD+Y HWAK+E P+ +AE A ARL +R+
Sbjct: 472 DVMELIEKEEIPAPAPIEQRWTASSRSLMSPASS-SSNDDIFSWVGIILYLPTTDARQRKQITEEFFHYRHLTQSRLWDQYSAYEHWAKIEVPKDKAELAALQARLRKRF 580
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: UPI001263B44F (L-galactono-1,4-lactone dehydrogenase, mitochondrial-like n=4 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263B44F) HSP 1 Score: 119 bits (298), Expect = 4.580e-29 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 2
Query: 8 LMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRYA 337
L +LIE+E +PAPAPIEQRWT+ S + MSPA+ PA E IFSWVG+IMYL DA R+ +T+ F YR L + +LWD+Y HWAK+E P+ + E A ARL +R+A
Sbjct: 449 LKQLIEKEDIPAPAPIEQRWTTRSRSPMSPAYSPAEDE-IFSWVGIIMYLPTTDARQRKDITEEFFHYRHLTQTQLWDQYSAYEHWAKIEVPKDKEELAALQARLRKRFA 557
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: V7BKI5_PHAVU (FAD-binding PCMH-type domain-containing protein n=14 Tax=Phaseoleae TaxID=163735 RepID=V7BKI5_PHAVU) HSP 1 Score: 119 bits (297), Expect = 6.190e-29 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
EL +LIE E +PAPAPIEQRWT+SS + +SPA P S + IFSWVG+IMYL + DA R+ +T+ F YR L + +LWDRY HWAK+E P+ + E A ARL +R+
Sbjct: 444 ELKQLIENEEIPAPAPIEQRWTASSRSPLSPASSP-SEDDIFSWVGIIMYLPSTDARQRKDITEEFFHYRHLTQEKLWDRYSAFEHWAKIEVPKDKEELAALQARLRKRF 552
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: A0A059DHN7_EUCGR (FAD-binding PCMH-type domain-containing protein n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059DHN7_EUCGR) HSP 1 Score: 119 bits (297), Expect = 6.440e-29 Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
EL RLIE+E +PAPAPIEQRWT+ S + MS A PA + IFSWVGVIMYL DA R+ +T+ F YR L + RLWDRY HWAK+E P+ E A ARL +R+
Sbjct: 454 ELKRLIEKEDIPAPAPIEQRWTARSKSPMSLASSPAEDD-IFSWVGVIMYLPTSDARQRKEITEEFFHYRRLTQERLWDRYSAYEHWAKIEVPKDNEELAALQARLRKRF 562
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Match: A0A2H9ZZJ4_9ASPA (L-galactono-1,4-lactone dehydrogenase 2, mitochondrial n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZZJ4_9ASPA) HSP 1 Score: 118 bits (296), Expect = 8.510e-29 Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 2
Query: 5 ELMRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSAEDADARRRVTDAFLAYRDLCKNRLWDRYDCAVHWAKLEKPRSEAEAADTSARLHRRY 334
EL +LIE E VPAPAPIEQRWT+ S + MSPA +S E IFSWVG+IMYL DA R+ +T+ F Y+DL + RLW +Y HWAK+E P+ + E AD ARL +R+
Sbjct: 445 ELKKLIESENVPAPAPIEQRWTACSQSIMSPAS--SSQEDIFSWVGIIMYLPTMDARQRKEITEEFFLYKDLLQMRLWAKYFAYEHWAKIEVPKDKEELADLQARLRKRF 552 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16972.4327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16972.4327.1 >prot_H-elongata_contig16972.4327.1 ID=prot_H-elongata_contig16972.4327.1|Name=mRNA_H-elongata_contig16972.4327.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp MRLIEEEGVPAPAPIEQRWTSSSSAAMSPAHDPASTETIFSWVGVIMYLSback to top mRNA from alignment at H-elongata_contig16972:3909..4907- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16972.4327.1 ID=mRNA_H-elongata_contig16972.4327.1|Name=mRNA_H-elongata_contig16972.4327.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=999bp|location=Sequence derived from alignment at H-elongata_contig16972:3909..4907- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16972:3909..4907- >mRNA_H-elongata_contig16972.4327.1 ID=mRNA_H-elongata_contig16972.4327.1|Name=mRNA_H-elongata_contig16972.4327.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at H-elongata_contig16972:3909..4907- (Himanthalia elongata Himel1 dioecious)back to top |