mRNA_H-elongata_contig165873.4148.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.830e-63 Identity = 100/164 (60.98%), Postives = 121/164 (73.78%), Query Frame = 1
Query: 10 TTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 501
TTCE +VD WP+F+ TS VN+ SC+AKD FTRMF + P +P STY LFT RD TV ASFN+P P S++LQ + GMSK AD TAQ+ACPAA+Q STPL+L+G+DLYNNP STA R F+ S+YTSS+ R+ R GPAFGIGGVGNTAFRK + F
Sbjct: 115 TTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 171 bits (434), Expect = 8.410e-51 Identity = 86/160 (53.75%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 4 IITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 483
I TTCE ++D T PKF GT+ N+A C+ KD FTRMF TV P +Y LF ARD +TVAASFN P S YLQ+ +K TAD+ AQL CPA +Q STPL+LLG+DLYN N R I EY S + R++R GPAFGIGGVGNT R
Sbjct: 61 IDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG) HSP 1 Score: 168 bits (426), Expect = 2.970e-49 Identity = 83/148 (56.08%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 43 WPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 486
W KFI TSV+N+ C+ KD FTRMF R +P TYL F ARD MTVAASFN P + +LQE M ++ + VTAQLACPA +Q STP++LLG+DLYN PN+T+ R I EY S + RV R GPAFGIGGVGNT FR +
Sbjct: 107 WYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A8H7PPD2_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PPD2_9FUNG) HSP 1 Score: 167 bits (424), Expect = 1.040e-48 Identity = 87/166 (52.41%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 1 MIITTCERTQVDDTWP---KFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQ-ERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 486
+I T+CE D T KF+GT+ VN+++C+ KD FTRMF TV +P+PA +YLLF ARD +T+AASFN P SQ++Q E + S K +D +Q+ACPA MQ+ STPL+LLG+DLYNN +ST R I EY S++ RV R PAFGIGGVGN R Y
Sbjct: 105 VIDTSCEHLSRDKTQTSAAKFVGTTAVNMSACIYKDRAFTRMFGTVATKPLPALSYLLFAARDSLTIAASFNAPPIVSQWIQTEGILNSTKASDTLSQIACPALMQVLSTPLHLLGLDLYNNSSSTTGQRFSLIRREYVKSVLARVGRIAPAFGIGGVGNNYVRSY 270
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.050e-47 Identity = 81/166 (48.80%), Postives = 103/166 (62.05%), Query Frame = 1
Query: 4 IITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 501
I T CE + D+ PKFIGT+ VN++ C+AKD F RMF + P P ++ LF RD +TVAASFN P ++ L++ M A AQL CPAA+Q STPL+LLG+DLYNN +A R F+ EY S+ R+ R GPAFGIGGVGNT FR + F
Sbjct: 96 IDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A8H7BJY4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BJY4_9FUNG) HSP 1 Score: 162 bits (410), Expect = 1.190e-46 Identity = 86/165 (52.12%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 MIITTCERTQVD---DTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 486
M+ TTCE+ VD +W KF+ T+ VN++ C+ KD FTRMF +P+P +YL F RD MTVAASF P S+ LQE+ S+ A V AQL+CPAA+Q FSTPL+LLG+DLYN P +T R I S Y + + R +R GPAFGIGGVGNT FR Y
Sbjct: 104 MVETTCEQRSVDHVTSSWIKFLATTAVNMSVCIYKDRAFTRMFGVSAVKPLPLLSYLFFATRDSMTVAASFIAPPIVSKALQEK-EWSEDHAKVAAQLSCPAAVQFFSTPLHLLGLDLYNRPAATVGQRAGLIRSLYFKTTLARCARIGPAFGIGGVGNTYFRSY 267
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS) HSP 1 Score: 162 bits (409), Expect = 1.930e-46 Identity = 80/157 (50.96%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 19 ERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQ-ERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 486
+R + KF+GT+ VN+ +C+ KD FTRMF TV +P+P +YLLF +RD +T+ +SFN P S+Y+Q E + S K +D AQLACPA MQ STPL+LLG+DLYNN NS++ R I EY S++ RV+R PAFGIGGVGN R Y
Sbjct: 115 QREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 161 bits (408), Expect = 6.790e-46 Identity = 83/161 (51.55%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 4 IITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGM--SKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 480
+ TTCE + + + PKF+ T++VN++ C+ KD FTRMF RP+P +TY LF +RD +TVAASFN P+ S L R G K++ADV AQLACPAA+Q STP++LLG+DLYN P +A R + EY S I R++R GPAFGIGG+GN FR
Sbjct: 121 VTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLL-RYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 158 bits (400), Expect = 2.740e-45 Identity = 77/158 (48.73%), Postives = 100/158 (63.29%), Query Frame = 1
Query: 10 TTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 483
T CE ++D+ PKFI T+ VN++ C+AKD F RMF + P P ++ LF RD MT ASFN P ++ ++++ M K A AQL CPAA+QL STPL+LLG+DLYNN R F+ EY S++ R+ R GPAFGIGGVGNT FR
Sbjct: 98 TACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRN 255
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL) HSP 1 Score: 158 bits (400), Expect = 2.820e-45 Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 4 IITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASQYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDLYNNPNSTAMARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 483
I T C+ T D+ PKF+GT+ VN+ C+AKD FT+MF + P P ++ LF RD MTVAASFN P +Q LQE+ + T+ +QL CPAA+Q STPL+L+G+DLYN+ ++ R F+ EY S+ R++R GPAFGIGGVGNT R+
Sbjct: 96 IETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAAFPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEKAHVKPSTSATISQLVCPAAVQFVSTPLHLVGLDLYNHKGASMSQRLVFVQREYIKSVFARIARIGPAFGIGGVGNTYCRQ 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165873.4148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig165873.4148.1 >prot_H-elongata_contig165873.4148.1 ID=prot_H-elongata_contig165873.4148.1|Name=mRNA_H-elongata_contig165873.4148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp MIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPAback to top mRNA from alignment at H-elongata_contig165873:90..1405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig165873.4148.1 ID=mRNA_H-elongata_contig165873.4148.1|Name=mRNA_H-elongata_contig165873.4148.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1316bp|location=Sequence derived from alignment at H-elongata_contig165873:90..1405+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig165873:90..1405+ >mRNA_H-elongata_contig165873.4148.1 ID=mRNA_H-elongata_contig165873.4148.1|Name=mRNA_H-elongata_contig165873.4148.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig165873:90..1405+ (Himanthalia elongata Himel1 dioecious)back to top |