mRNA_H-elongata_contig15786.3759.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15786.3759.1
Unique NamemRNA_H-elongata_contig15786.3759.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: D7G6Z3_ECTSI (DNA ligase IV n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z3_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 6.070e-101
Identity = 162/249 (65.06%), Postives = 195/249 (78.31%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGP--EGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAVPTADGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFDT 741
            +VV+WDD TGSMVPFG NR  AKEE EG G GTRWLFYVVFD++YA G G   E    M +I+R+A   S APCPP   ++ GNLTALPLDVRR+VLRS++ E +HRLEFVKS +VSAGDE +R++QL   FE  AI L EEGLVVK L GHY IGDKS+K  LW+KMKPEYSDQT D+DL+IL AGFA+G+MRSGLLSKFLVGVAVP  D  P  +++P+ RVGTG+++ ELE LN+ L+ KWK+FDT
Sbjct:  340 EVVTWDDNTGSMVPFGSNRTYAKEELEGRGGGTRWLFYVVFDVLYAEGSGGGLEDGGTMEEIVREAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVSAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKIPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDRQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDT 588          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A6H5KP03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP03_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 2.420e-91
Identity = 150/238 (63.03%), Postives = 179/238 (75.21%), Query Frame = 1
Query:   34 MVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGP--EGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAVPTADGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFDT 741
            MVPFG NR  AKEE EG G GTRWLFYVVFD++YA G G   E    M +I+RDA   S APCPP   ++ GNLTALPLDVRR VLRS++ E +HRLEFVKS +V AGDE +R++QL   FE  AI L EEGLVVK L GHY +      T LW+KMKPEYSDQT D+DL+IL AGFA+G+MRSG+LSKFLVGVAVP  DG P  +F+P+ RVGTG+++ ELE LN+ L+ KWK+FDT
Sbjct:    1 MVPFGSNRTYAKEELEGRGGGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEIVRDAVKSSIAPCPPRSEVQAGNLTALPLDVRRTVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMVN-----TPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGMLSKFLVGVAVPNEDGQPRKEFYPLARVGTGYSINELEDLNELLKDKWKSFDT 233          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A7S3XL94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL94_HETAK)

HSP 1 Score: 175 bits (444), Expect = 9.160e-47
Identity = 110/261 (42.15%), Postives = 152/261 (58.24%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLM-EKKHRLEFVKSRDVSA--GDEAKREEQLSAF----------FELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAVPTADGSP--PTKFFPITRVGTGFTLEELEALNKRLEGKWKTFD 738
            ++  WD+E G M PF  N+  A++E        R LFY++FD++Y AGEG              A E   P    + L+ G+LTA PL +RRR LR++L  E  HRLE     +V A  G E  +  Q +A           +   A++  EEGLVVK L+  Y  G+ S+KT  W+KMKPEYSDQT +LDL++LGA ++ GR R+GLLS FL+G+A   + G    PTKFF   +VGTG++L+ELE LN +LE  + TF+
Sbjct:   37 EIAVWDNELGEMAPFRSNKTVAQKEDH------RQLFYILFDVLYLAGEG--------------AAEVLGP----LGLRAGSLTAAPLRLRRRALRALLRKETPHRLELCHGLEVPALIGLEKNKNAQATATSQERRDKLLDYYTKAVEGKEEGLVVKDLESRYVTGNSSKKTNHWIKMKPEYSDQTTNLDLVVLGAYYSEGRRRAGLLSHFLLGLADGRSAGGDGRPTKFFTFGKVGTGYSLKELEDLNAKLEDHFVTFN 273          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A7S3H4G1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4G1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.230e-33
Identity = 81/207 (39.13%), Postives = 117/207 (56.52%), Query Frame = 1
Query:  103 WLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNAIQL-GEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGR-MRSGLLSKFLVGVAVPTADGSPPTKFFPITRVGTGFTLEELEALNKRLE 717
            W  ++ FDI+Y   +GP  +  +   L D           G  +  G +T LPL VRR +L  V+    +R+  V +R V++ D + R EQ+ ++F  N I L GEEGLV+K L+G YE+G+KSR T LWVKMKPEY D   DLDL++LGA    G+ +R   +S F+ GV     D   P  +  + +VGTG++ EEL  L   ++
Sbjct:    7 WTMFIAFDILYL--DGPNSQSIIQAALHDCN-------IYGRYVPSGEITNLPLIVRRNILTRVIHPIPNRVCIVPNRIVTSTDTSVRREQIESYF--NEITLSGEEGLVIKNLNGLYELGEKSRSTALWVKMKPEYGDSMQDLDLLVLGAYHGEGKGLRGRGISTFVCGVK----DDKNPNVYHTVCKVGTGYSFEELLNLRNLIK 198          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A482S4A1_9ARCH (DNA_LIGASE_A3 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S4A1_9ARCH)

HSP 1 Score: 132 bits (333), Expect = 6.830e-33
Identity = 92/257 (35.80%), Postives = 141/257 (54.86%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTR-----------WLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRK--TC----LWVKMKPEYSDQTADLDLIILGAGFAHG-RMRSGLLSKFLVGVAVPTADGSPPTKFFPITRVGTGFTLEELEALNKRLE 717
            ++ + + +  +++PFG N + A+ E E  G+  +           W+ +V FD+V+  GE     Q   D +    G   A  P  +    G +T LPL VRRR+L S++  ++HR+E VK + +++ +   R ++L+  FE   I  G+EGLVVK+L   Y +G+ SR   TC    +W KMKPEY D   DLDLII+G  +  G R R G+ SKFL GV    ADG   T +  + +VGTG+ + EL  L ++L+
Sbjct:   69 EICALEGQAKTILPFGSNMSVARLERE-YGANKQDQLGWHTDLPNWMCFVAFDLVFLQGE---DAQPAVDRVMGECGIDTAHVPSNV---HGEITHLPLIVRRRLLESLMEVREHRVEMVKHKYITSDNVEARRKELAEHFEKVVID-GQEGLVVKSLSSPYILGETSRSASTCKEGVVWCKMKPEYGDYIEDLDLIIIGGYYGEGARSREGV-SKFLCGVIEHRADGQ--TVYHSLAKVGTGYNMVELTELREKLK 314          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: T0Q6R2_SAPDV (DNA ligase 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q6R2_SAPDV)

HSP 1 Score: 127 bits (318), Expect = 1.250e-29
Identity = 84/250 (33.60%), Postives = 130/250 (52.00%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAK-REEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAVPT---ADGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFD 738
            +++ WD        FG  +  A E+A+G   G +WL YVV+DIVY  G+G         +++ A         P +     N+  LPL  R  VL +VL    HR+E ++   V A   A+ R E++ A  +   +  G EG+++K    HY  G+  RK+  WVK+KP+Y+  T  LD++++G  +  G  R G +S FL+GV   T    D S P   F   +VG+G++L ELEAL +RL   W+ ++
Sbjct:  310 EMLVWDSVAFKYESFGSLKTVAIEQAQGKNPG-QWLCYVVWDIVYCGGDGAAA------LIQKAC--------PNVASTSTNIMGLPLSARLSVLDAVLTPLTHRVERIEQVLVPASMPAQARHERVMAEVDARLLA-GYEGVILKDATSHYMCGEVGRKSQRWVKLKPDYAGMTRQLDVLVIGGYYGSGSRRGGAVSHFLLGVLERTPKDTDASLPVVSF--CKVGSGYSLPELEALRERLAPHWRPWE 541          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A1V9YY38_9STRA (DNA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YY38_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.690e-28
Identity = 82/250 (32.80%), Postives = 130/250 (52.00%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAG-DEAKREEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGV---AVPTADGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFD 738
            +++ WD        FG  +  A E+ +G     +WL YVV+DIVY  G    G+     +LR           P ++ +  N+  LPL  R +VL  VL+   HR+E ++   VSA     +R E++    +   +  G EGL++K    HY  G+ SRK+  W+K+KP+Y+  T  LD++++G  +  G  R G +S FL+GV   A    D + P   F   +VGTG+T+EEL+ L + L   W+++D
Sbjct:  312 EMLVWDSLEFKFQSFGSLKTVAVEQVQGKNP-HQWLCYVVWDIVYLHG----GDTPA--LLRKIC--------PNVLAETANVMGLPLSHRLKVLDHVLISLAHRVERIEQTLVSATLSPQERHERVMTAVDAR-LMAGYEGLILKDATSHYMCGESSRKSQRWIKLKPDYAGMTRQLDVLVIGGYYGSGARRGGAVSHFLLGVLERAPSEEDATIPVVSF--CKVGTGYTIEELDTLRQHLAPHWQSWD 543          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A1W0A5Q0_9STRA (DNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5Q0_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.690e-28
Identity = 77/248 (31.05%), Postives = 126/248 (50.81%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAG-DEAKREEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAV-PTADGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFD 738
            +++ WD      + FG  ++ A E+ +G     +WL YVV+DIVY  G+              +A    A   P I  +  N+  LPL  R ++L +VL    HR+  ++   V A     +R E++ A  +   +  G EGL++K    HY  G+  RK+  W+K+KP+Y+  T  LD+I++G  +  G  R G +S FL+GV   P ++           +VGTG+++EEL+AL K L   W+ ++
Sbjct:  312 EMLVWDSVEFKFLSFGSLKSVASEQVQGKND-HKWLCYVVWDIVYLGGK--------------SASTLLAKLCPTIKTETTNIMGLPLTSRLKILSAVLTPLDHRVMRIEQTLVPASLSPVERHERVMADID-KRLSAGYEGLILKDATSHYMCGEVGRKSQRWIKLKPDYAGMTRQLDVIVIGGYYGSGSRRGGAVSHFLLGVLERPLSENDFSVPVVSFCKVGTGYSMEELDALRKHLAPHWQPWE 543          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A485KJH4_9STRA (DNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJH4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 9.170e-28
Identity = 82/250 (32.80%), Postives = 125/250 (50.00%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNA-IQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAV-PTADGSPPTKFFPIT--RVGTGFTLEELEALNKRLEGKWKTFD 738
            +++ WD       PFG  +  A E+ +G+    RWL YVV+D+V   G              DAA    A CP G+     N+  LPL  R  +L  +L    HR+  +    V +   A+   +L    +++A +  G EGL++K    HY  G+  RKT  W+K+KP+Y   T  LD+++LG  +  G+ R G +S FL+GV   P A    P     ++  +VGTG+TLEEL+AL   L   W+ ++
Sbjct:  307 EMLVWDSLEFRYYPFGALKTVASEQLQGINP-HRWLCYVVWDVVSLGGP-------------DAAKLILAACP-GLTNPDCNIMGLPLSSRVHILDHILTSVPHRVTKIDQTLVPSTLTAQERHEL-VMADIDARLTAGFEGLILKDATSHYVCGEVGRKTQKWIKLKPDYEGMTQHLDVLVLGGYYGAGQRRGGAVSHFLLGVLQHPIAPNDVPKNIPMVSFCKVGTGYTLEELDALRTHLAPHWRPWE 540          
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Match: A0A6G0WNK5_9STRA (DNA ligase n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNK5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.000e-26
Identity = 79/252 (31.35%), Postives = 125/252 (49.60%), Query Frame = 1
Query:    1 KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEGPEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLMEKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNAIQLGEEGLVVKTLDGHYEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFLVGVAV----PTA--DGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFD 738
            +++ WD       PFG  +  A E+ +G+    RW+ YVV+D+VY  G  P   + ++D        +C    PG+     N+  LPL  R  +L  +     +R+  ++   V A    +   +L        +  G EGL++K    HY  G+ SRK+  W+K+KP+Y   T  LD+I+LG  +  G+ R G +S FL+GV      PT+  D  P   F    +VGTG++LEEL+AL   L   W+ ++
Sbjct:  312 EMLVWDSIEFRYYPFGSLKTVASEQPQGINP-HRWMCYVVWDVVYLGG--PAASKLISD--------TC----PGV--STSNIMGLPLSSRLGLLDRIFTSSPNRVMKIEQTLVPANLSDQERHELVMTNVDARLSAGYEGLILKDATSHYMCGEVSRKSQKWIKLKPDYEGMTQHLDVIVLGGYYGEGKRRGGAVSHFLLGVLQHSISPTSLPDNIPVISF---CKVGTGYSLEELDALRTHLAPHWRPWE 543          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15786.3759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Z3_ECTSI6.070e-10165.06DNA ligase IV n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KP03_9PHAE2.420e-9163.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XL94_HETAK9.160e-4742.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3H4G1_9STRA2.230e-3339.13Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A482S4A1_9ARCH6.830e-3335.80DNA_LIGASE_A3 domain-containing protein n=1 Tax=ar... [more]
T0Q6R2_SAPDV1.250e-2933.60DNA ligase 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=... [more]
A0A1V9YY38_9STRA2.690e-2832.80DNA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 R... [more]
A0A1W0A5Q0_9STRA2.690e-2831.05DNA ligase n=1 Tax=Thraustotheca clavata TaxID=745... [more]
A0A485KJH4_9STRA9.170e-2832.80DNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120... [more]
A0A6G0WNK5_9STRA2.000e-2631.35DNA ligase n=2 Tax=Aphanomyces euteiches TaxID=100... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15786contigH-elongata_contig15786:390..2853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue2e-87
Seed eggNOG ortholog2880.D7G6Z3
KEGG rclassRC00005
KEGG koko:K10777
KEGG ReactionR00381
KEGG Pathwayko03450,map03450
GOsGO:0000012,GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005911,GO:0005958,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006289,GO:0006297,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009506,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016874,GO:0016886,GO:0030054,GO:0032807,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048046,GO:0050896,GO:0051103,GO:0051716,GO:0055044,GO:0070419,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1990391
EggNOG free text desc.DNA ligase
EggNOG OGsCOG1793@1,KOG0966@2759
EC6.5.1.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA ligase, ATP-dependent, C-terminal
Ec32 orthologEc-01_011680.1
Exons6
Model size744
Cds size744
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15786.3759.1prot_H-elongata_contig15786.3759.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15786 390..2853 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929930.6642685-CDS-H-elongata_contig15786:389..4701622929930.6642685-CDS-H-elongata_contig15786:389..470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 390..470 -
1691679212.3186169-CDS-H-elongata_contig15786:389..4701691679212.3186169-CDS-H-elongata_contig15786:389..470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 390..470 -
1622929930.6827319-CDS-H-elongata_contig15786:804..10111622929930.6827319-CDS-H-elongata_contig15786:804..1011Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 805..1011 -
1691679212.329957-CDS-H-elongata_contig15786:804..10111691679212.329957-CDS-H-elongata_contig15786:804..1011Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 805..1011 -
1622929930.694768-CDS-H-elongata_contig15786:1310..14211622929930.694768-CDS-H-elongata_contig15786:1310..1421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 1311..1421 -
1691679212.3404567-CDS-H-elongata_contig15786:1310..14211691679212.3404567-CDS-H-elongata_contig15786:1310..1421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 1311..1421 -
1622929930.7103736-CDS-H-elongata_contig15786:1949..20421622929930.7103736-CDS-H-elongata_contig15786:1949..2042Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 1950..2042 -
1691679212.348154-CDS-H-elongata_contig15786:1949..20421691679212.348154-CDS-H-elongata_contig15786:1949..2042Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 1950..2042 -
1622929930.7210984-CDS-H-elongata_contig15786:2349..25071622929930.7210984-CDS-H-elongata_contig15786:2349..2507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 2350..2507 -
1691679212.355782-CDS-H-elongata_contig15786:2349..25071691679212.355782-CDS-H-elongata_contig15786:2349..2507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 2350..2507 -
1622929930.739155-CDS-H-elongata_contig15786:2759..28531622929930.739155-CDS-H-elongata_contig15786:2759..2853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 2760..2853 -
1691679212.364509-CDS-H-elongata_contig15786:2759..28531691679212.364509-CDS-H-elongata_contig15786:2759..2853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15786 2760..2853 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15786.3759.1

>prot_H-elongata_contig15786.3759.1 ID=prot_H-elongata_contig15786.3759.1|Name=mRNA_H-elongata_contig15786.3759.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
KVVSWDDETGSMVPFGHNRACAKEEAEGVGSGTRWLFYVVFDIVYAAGEG
PEGEQRMTDILRDAAGESCAPCPPGIVLKGGNLTALPLDVRRRVLRSVLM
EKKHRLEFVKSRDVSAGDEAKREEQLSAFFELNAIQLGEEGLVVKTLDGH
YEIGDKSRKTCLWVKMKPEYSDQTADLDLIILGAGFAHGRMRSGLLSKFL
VGVAVPTADGSPPTKFFPITRVGTGFTLEELEALNKRLEGKWKTFDT*
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mRNA from alignment at H-elongata_contig15786:390..2853-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15786.3759.1 ID=mRNA_H-elongata_contig15786.3759.1|Name=mRNA_H-elongata_contig15786.3759.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2464bp|location=Sequence derived from alignment at H-elongata_contig15786:390..2853- (Himanthalia elongata Himel1 dioecious)
AAGGTGGTGTCCTGGGACGACGAGACGGGCAGCATGGTACCCTTCGGACA CAACAGGGCCTGCGCGAAGGAAGAGGCTGAGGGGGTCGGCAGTGGTGGGT CTTGTTGTCTCTCGCCAGCTGCCTGGCTGTCACTGTCTGATGAACCTGAG ATTAGCTAGTTTTTAGGGATCATGTGCGGTTACAGTCGTCTATATAGTCT CACTCTTGAAACATCGGAGACCCTTGGCGGTATTTCGACGCCTGTTAGGT AAAAAAAAAAGCGTCATCCATGCGCACGTACTTTTGGAAAAAGAAAATAC AGTCACTTCTGGCCCTCTCTCGACGTCAAACTCTTGCGCCGTTTAGGCAC CCGATGGCTGTTTTACGTGGTGTTCGACATAGTCTATGCGGCCGGAGAAG GACCGGAAGGGGAGCAGCGCATGACGGACATCCTCAGGGACGCGGCGGGC GAGAGCTGTGCGCCTTGCCCCCCGGGAATCGTGCTCAAGGGCGGAAATCT GACGGTGAGACTTTACAAGACGTGACGAATCGGCTCCTCCACCGTCGAGG ATATGGGGAGTGGTGCTAAAATACTTCAAACCAGTACAACATGTCTATTG GTATCGTGCACTGCTATTGCGCCGATTGTGCCAAGTCGAGCGTATCCCAG AATCAATATCGGGACGCCGGTGCACATTTTTCTCTCTTTTACGTAGTACG AGGCTCAGATTCCTCCTCCTCTGGGAAAAGTGGCGAAGAAAATTTGTCTG CTGAGGACGCGAGGCAGTTTTGCGTCGCCGCAATCTGAATGCTTCGGTGC CTTCCGAGCAGGCGCTGCCGTTGGACGTGAGGCGGAGAGTGCTACGGTCC GTCCTCATGGAGAAAAAGCACCGTTTGGAGTTCGTCAAGAGCAGGGACGT GAGTGTTTTTTTTGTGTGCTTCTCCTTCACATCCGTCACTAATCGGGCTC CAGCCAACCATAACCACTACCGTACGCGGTTGACAGTCCGGTTCATGGCC TGCTGGACATGGAAAAATCTTATGGATTTTTCTCCCCCTGTCGCTTCTGT GGCTGTCAACCAATTACTGTCGAGGAGGTTCGTTTCTTCTTGGTGCGCAC CGGTAGTTGGGAGCAGCTCGTACCATGATTACTCATTTCTCTGTTTCTTG TTACGAGTGAGTATCCCTGTGCTTTTCCCCCAATTGAATCGAAAACTATA GATGAATGTCTACTCTATCTGTAGATATATTTACCGCTGTATTTTCGGAT GCCTGGTTGGTCTGGCAGTATTATATTCCGTCTCTGTACAGTCAAGTGGC GGCGAGGATTGACAAGCAGGCAGCACGCATTGTTTTTCATAGAATTTGCT TTATAGTAATGATATATAGTTAGAGAGAAAAAGAGATGGATTAATGGATC GATCGATGACGATGGCGATGCTGCAGGTGGAGGCCGGGGATGAGGCCAAG CGAGAGGAACAGCTGTCCGCCTTTTTCGAGCTCAATGCGATTCAGCTCGG CGAGGAAGGCCTCGTGGTGAAGACACTTGACGGTCACTACGAGGTGCGGT TTCGGAAACCGCTTCGCCGCCACCGCCGCCTCCTCGATATACCCACCATG TGTTTTTGGGAAGATGTTCTAGTCTAATGAAGATCTCCTCTTGAGGGGCG CTTGATGGGATTCTGGTGGTGTTTTCTGTAGACTTACACATGATACATCC CCCGTGCCAAGCCTGCTAACTATCTTCTGGTGGGATGTCTTGGAAAGCTG CACTTACATACACAACAATCTCGCTTTTGCGTGGCTTCGCGTTGCGTCGC TGGCTGGTTTGCTTGTTTGCTCTGGAAAAAACGCAAACACAGATCGGGGA CAAGAGCCGGAAGACGTGTCTCTGGGTCAAAATGAAGCCGGAGTACTCGG ACCAGACGGCGGATTTAGACCTTATCATTCTCGGAGCCGGTTTTGCCCAT GGCCGGATGCGTTCCGGACTCCTGTCTAAGTTTCTGGTTGGGGTGGCGGT CCCCACGGCGGATGGCAGCCCGCCCACCAAATTCTTCCCCATAACGAGGG TAAGAGAGGGCGATATATACATCTTAAGGTATGGTTTTGCTCTCGATTGA GAGGATGGTGTTGGAAATATGCGCAGACCGATTCTGACGTTGTTACGTCC TCATGTTTAGGGGGGGGGTGAAGAAGGGGAATGGGAAATCGAGTTCCGTG GTGGGACTTCTTCGTTAAGTGTGAGAGGCGATCCGTAGCTCTTTTTTCAT CGTTTCTACCTTCGGCGCTTGACGGTTGCTCGCGGTGTCGATTTCGGAGG CGAGCAGTGGAGAAGGGCGGCGAGGTAGCGCGTCTAAACCACATAGCATA AATTTCGCGAGTGGATTCGGATGCTGCGGCCAGGTGGGCACCGGGTTCAC CCTGGAGGAGCTCGAAGCACTCAACAAACGTCTCGAGGGAAAGTGGAAAA CCTTCGACACGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig15786:390..2853-

>mRNA_H-elongata_contig15786.3759.1 ID=mRNA_H-elongata_contig15786.3759.1|Name=mRNA_H-elongata_contig15786.3759.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at H-elongata_contig15786:390..2853- (Himanthalia elongata Himel1 dioecious)
AAGGTGGTGTCCTGGGACGACGAGACGGGCAGCATGGTACCCTTCGGACA
CAACAGGGCCTGCGCGAAGGAAGAGGCTGAGGGGGTCGGCAGTGAAGGTG
GTGTCCTGGGACGACGAGACGGGCAGCATGGTACCCTTCGGACACAACAG
GGCCTGCGCGAAGGAAGAGGCTGAGGGGGTCGGCAGTGGCACCCGATGGC
TGTTTTACGTGGTGTTCGACATAGTCTATGCGGCCGGAGAAGGACCGGAA
GGGGAGCAGCGCATGACGGACATCCTCAGGGACGCGGCGGGCGAGAGCTG
TGCGCCTTGCCCCCCGGGAATCGTGCTCAAGGGCGGAAATCTGACGGCAC
CCGATGGCTGTTTTACGTGGTGTTCGACATAGTCTATGCGGCCGGAGAAG
GACCGGAAGGGGAGCAGCGCATGACGGACATCCTCAGGGACGCGGCGGGC
GAGAGCTGTGCGCCTTGCCCCCCGGGAATCGTGCTCAAGGGCGGAAATCT
GACGGCGCTGCCGTTGGACGTGAGGCGGAGAGTGCTACGGTCCGTCCTCA
TGGAGAAAAAGCACCGTTTGGAGTTCGTCAAGAGCAGGGACGTGAGTGCG
CTGCCGTTGGACGTGAGGCGGAGAGTGCTACGGTCCGTCCTCATGGAGAA
AAAGCACCGTTTGGAGTTCGTCAAGAGCAGGGACGTGAGTGCCGGGGATG
AGGCCAAGCGAGAGGAACAGCTGTCCGCCTTTTTCGAGCTCAATGCGATT
CAGCTCGGCGAGGAAGGCCTCGTGGTGAAGACACTTGACGGTCACTACGA
GGCCGGGGATGAGGCCAAGCGAGAGGAACAGCTGTCCGCCTTTTTCGAGC
TCAATGCGATTCAGCTCGGCGAGGAAGGCCTCGTGGTGAAGACACTTGAC
GGTCACTACGAGATCGGGGACAAGAGCCGGAAGACGTGTCTCTGGGTCAA
AATGAAGCCGGAGTACTCGGACCAGACGGCGGATTTAGACCTTATCATTC
TCGGAGCCGGTTTTGCCCATGGCCGGATGCGTTCCGGACTCCTGTCTAAG
TTTCTGGTTGGGGTGGCGGTCCCCACGGCGGATGGCAGCCCGCCCACCAA
ATTCTTCCCCATAACGAGGATCGGGGACAAGAGCCGGAAGACGTGTCTCT
GGGTCAAAATGAAGCCGGAGTACTCGGACCAGACGGCGGATTTAGACCTT
ATCATTCTCGGAGCCGGTTTTGCCCATGGCCGGATGCGTTCCGGACTCCT
GTCTAAGTTTCTGGTTGGGGTGGCGGTCCCCACGGCGGATGGCAGCCCGC
CCACCAAATTCTTCCCCATAACGAGGGTGGGCACCGGGTTCACCCTGGAG
GAGCTCGAAGCACTCAACAAACGTCTCGAGGGAAAGTGGAAAACCTTCGA
CACGTAAGTGGGCACCGGGTTCACCCTGGAGGAGCTCGAAGCACTCAACA
AACGTCTCGAGGGAAAGTGGAAAACCTTCGACACGTAA
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