mRNA_H-elongata_contig15290.3496.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 239 bits (609), Expect = 6.750e-68 Identity = 117/251 (46.61%), Postives = 161/251 (64.14%), Query Frame = 2
Query: 170 EWTYYVTE-EGETPYGPEFWGEAFPDSYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKLTNLWSIFERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHD--MISAGGHTNRPVQPLNDREVTYV 913
EWTY T G+ PYGP W + +PD +QSPI+L+ V K S ++L+F+P EC S E++F + W + F C + P + F G+ Y LL +HIHS SEH +GGS H AEIH VHV+EG+ D LLVVGVL D YG N ++ +LW + + G+ E F + Y+++P+ P +SHYMGSLTTPPCTEGVKW+VM+D +S QL FRT++ + D + G+TNRP Q LNDR++ +V
Sbjct: 41 EWTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEV---FTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 228 bits (580), Expect = 8.510e-64 Identity = 126/278 (45.32%), Postives = 166/278 (59.71%), Query Frame = 2
Query: 116 GYLATEERRR----LDETE--STPEWTYY-VTEEGETPYGPEFWGEAFPDSYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVRE---GSTDDLLVVGVLMDAGTYGMNTKLTNLWSIFERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFR--TAMGVHDMISAGGHTNRPVQPLNDREVTYV 913
G +A +R+R DE E S P+WTY + EGE PY P W +PD GDSQSPINLS + + +A+EF+LE ECAS E+ F H W +DF+ C +L+FDG Y LL +HIHS SEH + GS HDAEIH+VH R+ G+ +LLV+GV +DA +G N L LW + G + V NPYEL+P+ YSHYMGSLTTPPC+E V+W+VM+ T++ QL +FR A + + +TNRP Q +N R V V
Sbjct: 24 GLVAASQRQRGPTTADEPEESSFPDWTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRG------VINPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 226 bits (577), Expect = 2.220e-63 Identity = 116/264 (43.94%), Postives = 163/264 (61.74%), Query Frame = 2
Query: 140 RRLDET--ESTPEWTYYVTEE-GETPYGPEFWGEAFPDSYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKLTNLWSIFERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHD--MISAGGHTNRPVQPLNDREVTYVT 916
R L ET E+ EWTY T GE PYGP+ W +PD G Q+PIN++ E + F P+EC STE+VF W VDF+ C + P L + G+ Y LL HIHS SEH +GG+ H AEIH+VH+++ +TD LLVVG++ + YG N +L +W++ + Q+ E F++ Y LLPA P ++ Y GSLTTPPCTEGV+W++M++ +S QL +R A+ +H+ +S G TNRP+Q LN R+V YV+
Sbjct: 34 RNLAETDDEAAAEWTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQ---FMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYVS 294
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 142 bits (359), Expect = 8.350e-36 Identity = 69/144 (47.92%), Postives = 99/144 (68.75%), Query Frame = 2
Query: 488 MGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKLTNLWSIFERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHD--MISAGGHTNRPVQPLNDREVTYV 913
+GGS H+AEIH VHV+ G+ D LLV+GVL D YG N ++ +LW + + G+ D+ FV+ Y+++P+ P +SHYMGSLTTPPCTEGVKW+VM+D + QL FRT++ + D + G+TNRP Q LN+R++ +V
Sbjct: 2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTT---DEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: A0A835Z7J7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J7_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.950e-31 Identity = 86/269 (31.97%), Postives = 128/269 (47.58%), Query Frame = 2
Query: 251 GDSQSPINLSESH-----------HVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFD-------GDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDA-GTYGMNTKLTNLWS--------------------------IFERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMG-VH-DMISAGGHTNRPVQPLNDREVTYVT 916
G QSPIN++ + V + + +EF P C E+V P +W V F C +P + G + H HSVSEH +GG +D E+HMVH + +V+GV++ A G NT++ N W+ + + QE V D D V++PY +LPAG EY Y+GSLTTPPCTE V W+VM + ++ +++ +FR +M H ++ G +RP QPLN R ++ T
Sbjct: 19 GARQSPINIAANDVLADCPAVAVADVAIQVAPMAIEFFPAACTFGELVIEPSVKNWEVQFTGCAAKPHIEVSARTASEGGAGADCRRFHFHSVSEHVIGGGYYDGELHMVHANADKSK-YIVIGVMLAANGNLRDNTEVQNYWARLAVKAQELVAPPAAGATEKPVDQKELGSQDQEPVAADAD--VADPYAMLPAGTEYYTYLGSLTTPPCTEAVTWVVMAEPVTVTQNEMRVFRESMAKAHGSLVDQSGSNSRPPQPLNTRHISLCT 284
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK) HSP 1 Score: 130 bits (326), Expect = 6.960e-30 Identity = 80/203 (39.41%), Postives = 113/203 (55.67%), Query Frame = 2
Query: 194 EGETPYG--PEFWGEAFPDSYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKL----TNLWSIFERGQEEVTEDDDDFVSNPY-ELLPAGPEYSHYMGSLTTPPCTEGVKWLVMT 781
+G+T Y PE WGE D G++QSPIN+ + K S+ L + +C +V + H+W VD + C+ + T++G YEL+ H HS SE+ +GG DAE+H+VH S +LLV+GV+ D YG N N WS G EV+ +PY E+LPA Y H+ GSLTTPPC+EGV W++M+
Sbjct: 70 DGDTQYACSPENWGEVNRDCEGENQSPINVVMAQKS-KSLSQLQLNKNNEDCDLLYLVDNY--HTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADS--NLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSS---TLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMS 264
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: A0A7C5Q8T5_AQUAO (Carbonic anhydrase n=1 Tax=Aquifex aeolicus TaxID=63363 RepID=A0A7C5Q8T5_AQUAO) HSP 1 Score: 127 bits (318), Expect = 6.770e-29 Identity = 94/282 (33.33%), Postives = 146/282 (51.77%), Query Frame = 2
Query: 77 AVIVLIGAGGVIVGYLATEERRRLDETESTP--EWTYYVTEEGETPYGPEFWGEAFPD----SYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKLTNLWSIFERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHDMISAGGHTNRPVQPLNDREV 904
+++V + G+++ + +++ E + +W Y +GE GP+ WG+ P+ G +QSPI++ E+ KK +EFH A T++ H+ V N E + ++G ELL H H+ SEH G E+H+VH E +LLV+GV+MD G + + +W + + EVT+++ N +LLPA Y Y GSLTTPPCTEGVKW+VM + +S Q+ F++ ++DM + RPVQPLNDR V
Sbjct: 4 SLLVALSVAGLLIAGCESAKKQSTSEKKEVHGMKWGY----KGEI--GPDRWGDLSPEFKLCKTGKAQSPIDIRET----KKGKLPQIEFH---YADTKLNVVNNGHTIQV---NYEPGSYILYEGKKCELLQFHFHTPSEHLFSGQAFPMEVHLVHKCEDG--NLLVIGVMMDEGAE--HELIKKIWEVMPSQEGEVTKEE--VKINAMDLLPASRGYYTYSGSLTTPPCTEGVKWIVMKEKIEVSKDQINRFKS---LYDMNA------RPVQPLNDRVV 254
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: A0A7X6DLN3_9BACT (Carbonic anhydrase family protein n=1 Tax=Candidatus Manganitrophus noduliformans TaxID=2606439 RepID=A0A7X6DLN3_9BACT) HSP 1 Score: 125 bits (314), Expect = 2.190e-28 Identity = 88/252 (34.92%), Postives = 122/252 (48.41%), Query Frame = 2
Query: 167 PEWTYYVTEEGETPYGPEFWGEAFPD----SYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKLTNLWSIF--ERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHDMISAGGHTNRPVQPLNDREV 904
P W Y E GPE WGE P G +QSPI+++ +K + ++HP + H+ V N + S+T G Y+LL H HS SEH+ G D E+H+VH + +L VVGV M+AG K LW E G+E+ V NP++ LPA +S+Y GSLTTPPC+EGV W+VM D +S +Q+ F + T RPVQPL++R +
Sbjct: 32 PHWDYDGKE------GPEHWGELDPKFQTCKSGKNQSPIDITSGK--PEKLGPIEFKYHPFP-----LTIVNNGHTIQV---NAPKGSSITVGGKKYDLLQFHFHSPSEHKKSGKAGDMEVHLVHKNDAG--ELAVVGVFMNAGKEHPLVK--TLWEHLPAEAGKEKTV---GQVVINPFDFLPAKKTFSNYPGSLTTPPCSEGVNWMVMNDSIEVSKAQVEKFTAIFPM---------TARPVQPLHERSI 251
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 123 bits (308), Expect = 1.560e-27 Identity = 87/260 (33.46%), Postives = 125/260 (48.08%), Query Frame = 2
Query: 224 WGEAFPDSYGDSQSPINLSESHHV-------VKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFAN-CEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGM-NTKLTNLWS--IFERGQEE-----VTEDDDDFVS-------------NPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHD----MISAGGHTNRPVQPLNDREV 904
WG +PD G QSPIN++ V A FD+ C ++ + W+V F C+ P++T +G + LL H+HSVSEH +GG +DAEIH VH L VVGV++ + + + N + W + G+++ V + VS NPY +LPA Y +Y+GSLTTPPC+E V W+VM + +S QL FR G+ D ++ G+ RP QP N R V
Sbjct: 2 WGALYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDMGA----CMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRA--GLMDPEFPLVDNYGNNARPPQPTNGRMV 255
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Match: A0A521S0F5_9BACT (Carbonic anhydrase family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A521S0F5_9BACT) HSP 1 Score: 122 bits (307), Expect = 3.590e-27 Identity = 89/252 (35.32%), Postives = 124/252 (49.21%), Query Frame = 2
Query: 167 PEWTYYVTEEGETPYGPEFWGEAFPD----SYGDSQSPINLSESHHVVKKASEFDLEFHPTECASTEMVFSPGDHSWSVDFANCEERPSLTFDGDHYELLNLHIHSVSEHEMGGSCHDAEIHMVHVREGSTDDLLVVGVLMDAGTYGMNTKLTNLWSIF--ERGQEEVTEDDDDFVSNPYELLPAGPEYSHYMGSLTTPPCTEGVKWLVMTDITMLSVSQLIMFRTAMGVHDMISAGGHTNRPVQPLNDREV 904
P W Y E GPE WGE P+ G +QSPI+++ +FD + P + + G H+ V N + S+T G YELL H HS SEH+M G D E+H+VH + + +L VVGV M+AG N + +W E G+E+ NP + LPA YS+Y GSLTTPPC+EGV W+VM +S +Q+ F + + T RPVQPL++R +
Sbjct: 59 PHWEYAGKE------GPEHWGEIAPEFQTCKTGKNQSPIDITSGKPEKLSPIQFDYKAAPI------GIVNNG-HTIQV---NVPKGSSITVGGKKYELLQFHFHSPSEHKMSGKSGDMEVHLVH--KSAEGELAVVGVFMNAGKE--NAVIKAVWDNLPTEVGKEKSVAQ---VTLNPADFLPAKKTYSNYPGSLTTPPCSEGVNWMVMKSSIEVSKAQVEKFTSIFPM---------TARPVQPLHERTI 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15290.3496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15290.3496.1 >prot_H-elongata_contig15290.3496.1 ID=prot_H-elongata_contig15290.3496.1|Name=mRNA_H-elongata_contig15290.3496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp MPSAGITLAVIVLIGAGGVIVGYLATEERRRLDETESTPEWTYYVTEEGEback to top mRNA from alignment at H-elongata_contig15290:526..7263- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15290.3496.1 ID=mRNA_H-elongata_contig15290.3496.1|Name=mRNA_H-elongata_contig15290.3496.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6738bp|location=Sequence derived from alignment at H-elongata_contig15290:526..7263- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15290:526..7263- >mRNA_H-elongata_contig15290.3496.1 ID=mRNA_H-elongata_contig15290.3496.1|Name=mRNA_H-elongata_contig15290.3496.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at H-elongata_contig15290:526..7263- (Himanthalia elongata Himel1 dioecious)back to top |