mRNA_H-elongata_contig14962.3317.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14962.3317.1
Unique NamemRNA_H-elongata_contig14962.3317.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: D8LQ85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ85_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 4.660e-158
Identity = 237/414 (57.25%), Postives = 293/414 (70.77%), Query Frame = 2 
Query:   56 KSIRRQLKXXXXXXXXXSLAVAAAVLLARSEEIGEWLRKVAPNVMP---------DAAAGADVVQRAIEQAKTCLQKDGLNVCLDAEGRATALYTYISQWYLSPKQHVIEMGASILLLAPSSFLWFRACRARARLQRAGDTFDVISPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVVMGMCSFFAREWSLLVMHVATTLWWGPFLAFIAPSLPSDPVEVVIFWIQHSLMLLAPFMRLLIGGRWMYRDFWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRLVWGVACIMLQAVAVSVVCGVACLFGRWPSHLSSSTTC------------AVQEGTRRKTEFVG--------------------VPGDAVEISREKAVLLVDGN 1174
            K+ +R LK          LA A+A L+ARS++IGEWL+ VAP+V+P         D A  AD V RAI +AK+C+Q +G+NVCLDAEGR TALYT+ISQWYLSP+QHV+EM  SIL+L+P  +L+F+ CRAR RL+RA   FD   P   M+LWG  L+  VGAGAF KF++ EL+SHPAY+WQPCHVHS+VMG+C+F   E SLLVMHVATTLWWGPFLAF+APSLP+DPVE+ IFW QH+LMLLAPF+RL +G RW+YRDFWWNSVGF+FLTCYHWWWLAPVN+ TGVNVATM+VPPDSL   GKYYR VWG+ C +LQ  AV V+C +A +FG+ PS  +++               +  +GT ++T                        VP DAV IS+EKAV LVDGN
Sbjct:   29 KTFKRALKGTVGV----GLAAASAALIARSDDIGEWLQSVAPHVLPHTVVVPGGADTAVLADFVLRAIAEAKSCVQ-EGVNVCLDAEGRVTALYTFISQWYLSPRQHVVEMALSILVLSPLVYLYFKLCRARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALMLLAPFLRLTVGTRWLYRDFWWNSVGFVFLTCYHWWWLAPVNLFTGVNVATMSVPPDSLEMFGKYYRPVWGLICGLLQLAAVGVMCVLARVFGQMPSSTAAAAASPTPSSGRAKGRSSAMKGTPQRTNGNARSSTGSXXXXSNNACGVRRRVPDDAVGISQEKAVSLVDGN 437
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: A0A835Z0S0_9STRA (TMEM164 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S0_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.280e-79
Identity = 122/245 (49.80%), Postives = 165/245 (67.35%), Query Frame = 2 
Query:  314 YISQWYLSPKQHVIEMGASILLLAPSSFLWFRACRARARLQRAGDTFDVISPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVVMGMCSFFAREWSLLVMHVATTLWWGPFLAFIAPSLPSDPVEVVIFWIQHSLMLLAPFMRLLIGGRWMYRDFWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRLVWGVACIMLQAVAVSVVCGVACLFGRWPS 1048
            Y+S WY++P+QH+IE   S+++LAP    ++R C    R     D  +    P   ++WG +L+  V    +FK++ N + SHPAY+ QPCHVHSV M + +F    WS  ++HV+ TLWWGPFLAF+AP LP+  +EVV+FWIQH+LML     R+L G  WMYRDFWWN+VG++ LTCYH+W+LAPV++VTG+NVATM VPPD L   G +YR  W V C +L   AVSVV G A + G  P+
Sbjct:   55 YLSAWYITPQQHIIETIVSLVVLAPLVGFYYRKCSEGLRAHAVQDRTEKKRFPVLQKVWGGLLLLSVVLQVWFKWNYNHVSSHPAYLAQPCHVHSVAMALTAFSDASWSRGLLHVSATLWWGPFLAFVAPDLPASALEVVVFWIQHTLMLCIIIARVLTGSNWMYRDFWWNTVGYVLLTCYHFWFLAPVSLVTGINVATMMVPPDPLETFGAWYRPAWTVCCGLLHLFAVSVVNGAAAMAGVLPA 299
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: A0A7S2V140_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V140_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.440e-23
Identity = 56/160 (35.00%), Postives = 84/160 (52.50%), Query Frame = 2 
Query:  299 TALYTYISQWYLSPKQHVIEMGASILLLAPSSFLWFRACRARARLQRAGDTFDVIS---PPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVVMGMCSFFAREWSLL--VMHVATTLWWGPFLAFIAPSLPSDPVEVVIFWIQHSLML 763
            T    Y   W+LSP+ HV+E  AS+++  P      + C    R Q A    + I+   P    ++W ++L+         K+      SHPAY+ QPCH+ + +MG+ +F AR   L   + HV  T WWGP LA +AP LP+   EV +F++QH LM+
Sbjct:   72 TVASEYHGWWFLSPEHHVLEFLASLIVYTPILLFCLKQCAKSLRYQTALQQMEGITIPQPDLLQKVWAVVLLVIATLQIRLKYISLNPASHPAYLLQPCHITTFMMGLITF-ARPTMLTEALFHVVATTWWGPLLALVAPDLPASSFEVFLFYLQHYLMM 230
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: T1FKA4_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FKA4_HELRO)

HSP 1 Score: 73.2 bits (178), Expect = 2.340e-10
Identity = 60/232 (25.86%), Postives = 103/232 (44.40%), Query Frame = 2 
Query:  329 YLSPKQHVIEMGASILLLAPSSFLWFRA-CRARARLQRAGDTFDVI--------------SPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVV-MGMCSFFAREWSLLVMHVATTLWWGPFLAFIAPSLPSDPVE--VVIFWIQHSLMLLAPFMRLLIGGRWMYRDF---WWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRL 961
            YLS +Q ++E    ++LL  S  +W+   C    ++    D   V+              SPP   ++  ++L    G    FK S  + +    +I  PCHV +++ + +    A + S L+      +  G  +A   P + +  +E  V  +W QH L+L  PF  + +GG +   DF    W+         YH+ +L P+++VTG+N+  +  P  S    G YYRL
Sbjct:   24 YLSSRQKILE--TFLVLLVSSLQIWYMMPCLGPRKVLNNNDQNGVVNDHSQLTDVSIKNYSPPLLKQILLLLLSLVFGIELGFKLSTRQFI----WILNPCHVVTIIQIYLLIAPASKLSSLMFRFHIHMLSGVSIAICFPVVNTRLLEFEVATYWAQHLLLLFIPFYLMSLGGAYSVEDFADMTWSVFALSIQMIYHFIFLQPISLVTGINLNNIMCPAVSDPFKGTYYRL 249
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: A0A6I9USL5_BACDO (transmembrane protein 164 n=4 Tax=Bactrocera TaxID=27456 RepID=A0A6I9USL5_BACDO)

HSP 1 Score: 68.9 bits (167), Expect = 1.460e-8
Identity = 45/176 (25.57%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  455 DVISPPWTMRLWGMMLVACV-GAGAFFKFSRNELVSHPAYIWQPCHVHSVV-MGMCSFFAREWSLLVMHVATTLWWGPFLAFIAPSLPSDPV--EVVIFWIQHSLMLLAPFMRLLIGGRWMYRDFW---WNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRL 961
            ++  P   +RL  M+L+  + G    FKF+   ++    Y+  PCH+ ++V + + +    + ++ +  +      GPFLAF+ P +    +  E   +WIQH+L+ + P   +L  G +   D +   W ++G   +  YH+ +L P+++ TG+N++ M     S    G+ YR+
Sbjct:   63 EINKPHSAIRLTLMLLMTFIFGVEMGFKFANKNMI----YVLNPCHIQTLVQIYLLAAKPSKTTIALFRIQMNNLNGPFLAFLFPEVECRTLHFEQATYWIQHALLYIIP-AYILRSGAYQIEDLYDYNWTTIGTATMLLYHFAFLTPISMFTGINLSHMLCAALSDPFQGQNYRI 233
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: A0A6P5VVD2_DROOB (LOW QUALITY PROTEIN: transmembrane protein 164 n=3 Tax=obscura subgroup TaxID=32357 RepID=A0A6P5VVD2_DROOB)

HSP 1 Score: 65.5 bits (158), Expect = 1.680e-7
Identity = 55/197 (27.92%), Postives = 89/197 (45.18%), Query Frame = 2 
Query:  464 SPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVV-MGMCSFFAREWSLLVMHVATTLWWGPFLAFIAPSLPSD--PVEVVIFWIQHSLMLLAPFMRLLIGGRWM--YRDFWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRLVWGVACIMLQAVAVSVVCGVACLFGR 1039
            SP     L  M +V  +  G  FK S   ++    +   PCHV + + + + +      +  +  +  +   GPFLAF+ P +     P E   +WIQH+L+ + P   +  G   +    DF W+ +G  F+  YH+ +L+P++I TG+N+  M     S    G  YRL    AC     +   +  G   LFGR
Sbjct:  100 SPTRLFLLIAMSMVFGIEMG--FKLSGQSMI----FALNPCHVQTCLQIYLLAAKPTRTTTAMFRIQMSNLNGPFLAFLFPEVEGRTYPFEQSTYWIQHALLYIIPIYIIRSGAYTVEDLGDFHWSHIGTAFMLFYHFIFLSPLSIFTGINLDHMLCAAMSDPFQGPNYRLF---ACCHQALLCPLLSKGTVLLFGR 287
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: B4GIZ5_DROPE (GL17784 n=7 Tax=obscura group TaxID=32355 RepID=B4GIZ5_DROPE)

HSP 1 Score: 63.9 bits (154), Expect = 4.420e-7
Identity = 63/245 (25.71%), Postives = 111/245 (45.31%), Query Frame = 2 
Query:  329 YLSPKQHVIEMGASILLLAPSSFLWFRACRARA--RLQRAGDTFDVISPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVV-MGMCSFFAREWSLLVMHVATTLWWGPFLAFIAPSLPSDPV--EVVIFWIQHSLMLLAPFMRLLIGGRWMYRD---FWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRLVWGVACIMLQAVAVSVVCGVACLFGR 1039
            Y++ ++  IE   ++LL A   F+  R+ +  A  +L    +     SP     L  M +V  +  G  FK +   ++    +   PCHV + + + + +    + +  +  +  +   GPFLA++ P +       E   +WIQH+L+ + P + L+  G +   D   F W  +G  F+  YH+ +L+P++I TG+N+  M     S    G  YRL    AC     +   +  G   LFGR
Sbjct:   27 YMTDRRRWIE---TVLLSALFIFIMHRSWKRLAPIKLPPLHEIEKSHSPTRLFLLIAMSIVFGIEMG--FKLTGQSMI----FALNPCHVQTCLQIYLLAAKPTKTNTAMFRIQMSNLNGPFLAYLFPEVEGRTYHFEQSTYWIQHALLYIIP-IYLIRSGSYTVEDLGDFHWTKIGTAFMLFYHFIFLSPLSIFTGINLDHMLCAAVSDPFQGPNYRLF---ACCHQALLCPLLTKGTVLLFGR 258
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: A0A267GR66_9PLAT (Uncharacterized protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GR66_9PLAT)

HSP 1 Score: 63.5 bits (153), Expect = 4.420e-7
Identity = 67/248 (27.02%), Postives = 108/248 (43.55%), Query Frame = 2 
Query:  263 GLNVCLDAEGRATALYTYISQWYLSPKQHVIEMGASILLLAPSSFLWFRACRARARLQRAGDTFDVISPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVVMGMCSFFARE-WSLLVMHVATTLWWGPFLAFIAPSLPSD--PVEVVIFWIQHSLMLLAPFMRLLIGGRWM--YRDFWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRLVWGVACIMLQ 991
            G+N  LD  G       Y++ W    K+ +  +  +I+ L      W      + R +   +T D       + L+G   +   G    FK S   L+    +++ PCHV +++        +   S+ +      L  GP LA + P + +   P EVVI+++QH L+L  P   LL G        DF W ++     + YH+  L P++ VT VN+ ++  P  S    G +YRL W V   MLQ
Sbjct:   11 GVNFSLDGAG-GPGCVNYLT-WGQKAKETIPCLCVAIMQL------WLGLSSVQVRHKHNANT-DPRLGKTLLLLFGSAHIFVFGIEIGFKLSTGTLI----WLFNPCHVITIIQITLLILPKSSLSVGLFRSMIHLLNGPLLALLLPVVNTRLLPGEVVIYYLQHVLILTVPLCMLLTGKFTTEPLLDFSWVTLSQSMQSIYHFTVLQPISSVTMVNLDSILCPAISDPFRGHHYRL-WAVFHQMLQ 244
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BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Match: A0A1I8GQN7_9PLAT (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GQN7_9PLAT)

HSP 1 Score: 63.5 bits (153), Expect = 1.100e-6
Identity = 67/248 (27.02%), Postives = 108/248 (43.55%), Query Frame = 2 
Query:  263 GLNVCLDAEGRATALYTYISQWYLSPKQHVIEMGASILLLAPSSFLWFRACRARARLQRAGDTFDVISPPWTMRLWGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVVMGMCSFFARE-WSLLVMHVATTLWWGPFLAFIAPSLPSD--PVEVVIFWIQHSLMLLAPFMRLLIGGRWM--YRDFWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLVGLGKYYRLVWGVACIMLQ 991
            G+N  LD  G       Y++ W    K+ +  +  +I+ L      W      + R +   +T D       + L+G   +   G    FK S   L+    +++ PCHV +++        +   S+ +      L  GP LA + P + +   P EVVI+++QH L+L  P   LL G        DF W ++     + YH+  L P++ VT VN+ ++  P  S    G +YRL W V   MLQ
Sbjct:   11 GVNFSLDGAG-GPGCVNYLT-WGQKAKETIPCLCVAIMQL------WLGLSSVQVRHKHNANT-DPRLGKTLLLLFGSAHIFVFGIEIGFKLSTGTLI----WLFNPCHVITIIQITLLILPKSSLSVGLFRSMIHLLNGPLLALLLPVVNTRLLPGEVVIYYLQHVLILTVPLCMLLTGKFTTEPLLDFSWVTLSQSMQSIYHFTVLQPISSVTMVNLDSILCPAISDPFRGHHYRL-WAVFHQMLQ 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14962.3317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LQ85_ECTSI4.660e-15857.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0S0_9STRA1.280e-7949.80TMEM164 family-domain-containing protein n=1 Tax=T... [more]
A0A7S2V140_9STRA3.440e-2335.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
T1FKA4_HELRO2.340e-1025.86Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A6I9USL5_BACDO1.460e-825.57transmembrane protein 164 n=4 Tax=Bactrocera TaxID... [more]
A0A6P5VVD2_DROOB1.680e-727.92LOW QUALITY PROTEIN: transmembrane protein 164 n=3... [more]
B4GIZ5_DROPE4.420e-725.71GL17784 n=7 Tax=obscura group TaxID=32355 RepID=B4... [more]
A0A267GR66_9PLAT4.420e-727.02Uncharacterized protein n=2 Tax=Macrostomum lignan... [more]
A0A1I8GQN7_9PLAT1.100e-627.02Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14962contigH-elongata_contig14962:852..6954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score72.0
Seed ortholog evalue5.8e-10
Seed eggNOG ortholog6412.HelroP183886
EggNOG free text desc.TMEM164 family
EggNOG OGs28PNH@1,2QWAJ@2759,398G9@33154,3BBZ9@33208,3D0B3@33213
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTransmembrane protein 164
Ec32 orthologEc-26_005770.1
Exons4
Model size2427
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14962.3317.1prot_H-elongata_contig14962.3317.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14962 2102..6767 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929884.5241983-UTR-H-elongata_contig14962:851..21011622929884.5241983-UTR-H-elongata_contig14962:851..2101Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14962 852..2101 -
1691679194.8784673-UTR-H-elongata_contig14962:851..21011691679194.8784673-UTR-H-elongata_contig14962:851..2101Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14962 852..2101 -
1622929884.583013-UTR-H-elongata_contig14962:6767..69541622929884.583013-UTR-H-elongata_contig14962:6767..6954Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14962 6768..6954 -
1691679194.932753-UTR-H-elongata_contig14962:6767..69541691679194.932753-UTR-H-elongata_contig14962:6767..6954Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14962 6768..6954 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929884.5372245-CDS-H-elongata_contig14962:2101..22871622929884.5372245-CDS-H-elongata_contig14962:2101..2287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 2102..2287 -
1691679194.8912263-CDS-H-elongata_contig14962:2101..22871691679194.8912263-CDS-H-elongata_contig14962:2101..2287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 2102..2287 -
1622929884.5477037-CDS-H-elongata_contig14962:2982..31631622929884.5477037-CDS-H-elongata_contig14962:2982..3163Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 2983..3163 -
1691679194.9015234-CDS-H-elongata_contig14962:2982..31631691679194.9015234-CDS-H-elongata_contig14962:2982..3163Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 2983..3163 -
1622929884.5583968-CDS-H-elongata_contig14962:3641..41431622929884.5583968-CDS-H-elongata_contig14962:3641..4143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 3642..4143 -
1691679194.9111242-CDS-H-elongata_contig14962:3641..41431691679194.9111242-CDS-H-elongata_contig14962:3641..4143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 3642..4143 -
1622929884.5702686-CDS-H-elongata_contig14962:6646..67671622929884.5702686-CDS-H-elongata_contig14962:6646..6767Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 6647..6767 -
1691679194.9218366-CDS-H-elongata_contig14962:6646..67671691679194.9218366-CDS-H-elongata_contig14962:6646..6767Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14962 6647..6767 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14962.3317.1

>prot_H-elongata_contig14962.3317.1 ID=prot_H-elongata_contig14962.3317.1|Name=mRNA_H-elongata_contig14962.3317.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=330bp
MPDAAAGADVVQRAIEQAKTCLQKDGLNVCLDAEGRATALYTYISQWYLS
PKQHVIEMGASILLLAPSSFLWFRACRARARLQRAGDTFDVISPPWTMRL
WGMMLVACVGAGAFFKFSRNELVSHPAYIWQPCHVHSVVMGMCSFFAREW
SLLVMHVATTLWWGPFLAFIAPSLPSDPVEVVIFWIQHSLMLLAPFMRLL
IGGRWMYRDFWWNSVGFLFLTCYHWWWLAPVNIVTGVNVATMTVPPDSLV
GLGKYYRLVWGVACIMLQAVAVSVVCGVACLFGRWPSHLSSSTTCAVQEG
TRRKTEFVGVPGDAVEISREKAVLLVDGN*
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mRNA from alignment at H-elongata_contig14962:852..6954-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14962.3317.1 ID=mRNA_H-elongata_contig14962.3317.1|Name=mRNA_H-elongata_contig14962.3317.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6103bp|location=Sequence derived from alignment at H-elongata_contig14962:852..6954- (Himanthalia elongata Himel1 dioecious)
AGGTGGTGATGACGGGGGACCGGCAGCATCGAGAGGGGTCGAGAACTTTG
CGAACAAGTCGATCCGTAGACAGCTTAAACGCGCGCTAAAGGGAGCCGTG
TGCGGCAGTCTGGCCGTGGCCGCCGCGGTTCTGCTCGCCCGCAGCGAAGA
AATCGGGGAGTGGTTGAGAAAGGTGGCCCCGAACGTGATGCCGGACGCAG
CGGCTGGAGCCGACGTGGTGCAGAGGGCGATCGAGCAGGCCAAGACTTGT
CTGCAGAAGGACGGCCTCAACGTGTGCTTGGACGCCGAGGGCCGCGCTAC
GGCTCTGTGTGAGTGTCCACCCTGGAGTCGCCTCGAACCCCATAGATAGA
CACGAGCCTCTTTGTTTGCAGCATACTGTATTTTGGGTCTTCGTTATTTA
TTTTTTCCTTCTATCTTTTGACCCTCAGTGTTAAAAGCAATCTTAACGCC
CCTGAATTGGGTTGTTCCTGCTAGACAGTCGCGAGGTTTTGGTGAAGAAA
AAAAAACGTCAATATATTTTTTAAGATTAAAAAAAAAACACGTCGTAGCT
CTACGGAGCTCTTCAGGCGAGTGCCCGCGTCTTGCTGGCTATAGGTGTGT
TTTGCACGATGCGCTGATGATTTTGCGAGACGCTTCTGGCGTTGCTGAAG
CCTAGTCGATTGCCTAGGGCAGCTTGTCGCTTCTGACGTTGATGAGGCCT
CGTCGATTGCCTTGGGCAGCTTGTCGCTTCTGATGTTGATGAGGCGTGTC
GCCATGGTCAGCAGGATTCATGTCTGATCCGTGCTTGCTCTCCGTGACAA
CAAATAGCTACTCGTACGGCTCGGAATATGATACGCCGAGACGATACGTC
GTCGTAGTATTGGTATTAAAAGTAGCAGCAACAGCAGGTGTAAACGATCC
CACTGCTCGTATCCTAACCTCTGTGTAAATACTTGTTTGGCCTTATTCCA
GGAGAGTTGCACTGTATGTCGATCCCCCTCGGGTAGACTTGTTTTAATAC
CTTCCAGAGGTACGAGGCCTGCTACTCTTGTAGACCGCAATTTTCCCACC
GAGATGCTTTTATTTTTATTGGGGTATTTTTTTTGTTTCTTTAAAAAAGT
ATGAACTCACTCAAATCCTCCAAATATCCACGCCATCTTAACACCTCAAC
TCTTTTGGCACTGAATTTCAAGTTTTGTATTGAATTTAGGTTTTAACAAA
ACAGATCAAGTCCCATAAGGGTTAAAATTCTGTCAAGGGGTTAATACCAT
TCATAGTGTACCAGTCCCTCCTTTCCTTTAGTCGTAAGGTATTTAGTACG
CATCTAATTCTCCGCAGTAGATTCACGCTAAAAAAATAATATCGCGATGC
AATTTATTACCAGTACCAGCTCTCCCACAAAAACGCCTCGTCCACATTCT
TGAAAACCGATGGTGGAGCCTTGTTTACTACAGAATCCAGAAAAGAACCA
TACGCGCAAGCCACGTACTGTTCTTGGTTGCCAGCTACAGCAGTTCTATA
GCTAGGATACTCGAGCGACGAGTGGAGATTTCATCAAAAAGCTAAATTGT
TGCCGCCGTGGTAGTTCCTTAAAAATAAAGAAACTAAAAAAGAAATGAAC
AAAATCACCCACATGACAAGGGGAAAAAACACCCAAGTGCACCCACCCAT
CCGGGGATTGGTAAACTAACCACTACCTACCTACATTGTGGCCTACTCCC
TTGTGAAGATTTTGTGCTCATAGTTAGTAGTAATGTACACACTGGAATCT
GACGATAGTTAATTGGTCATAGTCCCCTGGAATTTTGAGCATTCGTGGTG
TAATAGAGTATATAGGATATAATGTGGATTTTCGAGGGGTTTGATTGAGT
TCATGTTTTTTTGGAGGGGGAAAAAGCATACAGTATAGACACTACCGCTT
GCTGACTTGCCGTTGCATTCGCCGAAGATGAAGACAGGGCTGCAGCAAGC
CATCGATAAAGTTCATCGTACGAACAACGATATTGGATTTAGTGGACGCT
AATGATTTCACGCGCACGCTGGCTGGCTGTTTGTCTCTTGGGGGGATATG
TTTCCGGCGCGCGCGTGACGTCATTAGGCATCTGCGCAAGTTCAGTTCGC
GCGCGAGCTAGCTACGACGTGCTTCGTGTATTTTCTTGTGTGTGTGTGTA
TGTTTTTTTCTGTACTTTTAGCCTACCCGATCTCCTCCGGAAATACAGAA
CTATCTCGGGCCTCGATCTAATCACCTCGATAAACCTCACCACCCCTCTC
GCCCGCCGTATCGCGGTGGATTATATTGAGGGGGGGGGGGGGGGGGGGGG
GGGGGCATGCGCTGGCACGTAGTGTTCGCCTTGGTGCGTCCTAGATCCAC
GAGAGAATGATGCAATAGCTCCCGACTACTATTCAAACCCCGCCCTCATA
TCCTTCATTATCAAATGGAAAATCATGTCGAGGTGAAAAGCAGGATAATA
ATAATAATTAATTGCAGGGGAACTATAGCAATAAAGGCATGCGGAAGGCC
ACAAACAGTTGGAAGCCTGGTCACGCCGGGTTAGATGCCAGGTTGGCAGT
TACTTCTTCCCCTGTTATAAAAGGCCCCACCATCTGTACGTACGCCCCCG
TGTCTGTGCAAGGGTTTGAGGGGGGAGACGGGGGAAGAGATTGTGTAGGG
CATCATCGGCTGTAAGCTCCACGCGTTGCGCTTGACCGCTCATCATCTCT
GTCCGCCACTCTCCCAAATAATTCAAGGACCCTGTGTCGCTGCTGCTGCT
GCTACTGCCTCTTTTCCTTCCCCCAACACCATCACCGACTTAATGACATC
GCATATGGAAGACACTTACATATCTCAGTGGTACCTGAGCCCGAAACAGC
ACGTGATCGAGATGGGGGCCTCCATTCTCCTCCTCGCCCCTTCGAGCTTC
CTGTGGTTCAGAGCCTGCCGAGCGCGGGCGCGCCTGCAGCGCGCGGGGGA
CACGTTTGACGTAATCTCCCCGCCCTGGACGATGCGGCTCTGGGGCATGA
TGCTCGTGGCATGCGTCGGCGCGGGAGCCTTCTTCAAGTTTTCCAGAAAC
GAGCTGGTCTCCCACCCCGCCTATATCTGGCAGCCGTGCCACGTACACAG
CGTCGTGATGGGTATGTGCTCATTCTTCGCAAGAGAGTGGTCACTTCTGG
TGATGCACGTGGCAACGACGCTCTGGTGGGGGCCATTCCTGGCGTTCATC
GCGCCCTCCCTTCCCAGCGACCCCGTGGAGGTCGTGATATTCTGGATCCA
GCACTCCCTAATGCTTTTGGCGCCCTTCATGAGGTTGTTGATCGGGGGGC
GGTGGATGTACAGGTAAGAGAGATGGGGGGGCAATTCCTGGGAGTAGAGA
TGGCTGGCTGGCTCAAAAAAGTCGCAGAAAAATACGCCAGTCATCTTGTG
TCGTGAAGTGTTGGTTAGGTACTTGATTGGTTGGTTGATTGGGGCTGCCG
AGCTCTACGCGCCTGGAAGGTGGCCTAGAAACGACCCCGTATCGCGTATC
ATCTTCTTATCTGAAACGGGACCCAGCCGAAGAGTTTTAGAGCGTTCCCT
GCGTCGCGAGGCGATCGATCATTAGGTTTTTATTCGTTTATTATTATTTA
GTTGGGGGCTAGCGGGGTAAGGTGGTAAAGGTTTTACAACGAATCACACA
CTTTTTAAAGTGTGGCGACACGGACCGCGCTCGGCTCGGAAATGACCGAG
TTCGCGAGAAATAATCGCCCCGTCGGCCCTTCGGTTTGTTCTGCCGCGCG
CGTCTGTTTCGTTCTTGATCTCCCCGTGCGACGCTCCCCAGGGATTTCTG
GTGGAACTCCGTGGGGTTTTTGTTTTTGACTTGCTATCATTGGTGGTGGC
TTGCTCCGGTCAACATCGTCACGGGGGTGAACGTTGCGACCATGACGGTA
CCGCCCGACTCTTTGGTAGGGCTCGGGAAATACTACCGTCTAGTGTGGGG
GGTGGCGTGTATCATGCTTCAGGTGCGGAGCTGTGTTGGCTGGGTGTGGG
GTAGGGTGAGTGGGTGTGGTTGCGGTTTGAATATTTTTGGGACGAGGTGC
AGTCTCAGCCCTGTTTTTTTTTTTTTTTCGTCTAGACCACTACATTGTTG
TACTGACGTACCATACATTATTACAGTCAAGTACAGTGTTGTACACAAAT
CTATCGTCATGTCGGCCTTTGTATTTTAGACCACGCCACCTAGAGTGGTG
CTCGCTTTGTTTCTCCTCCATGCTCCGTCCTCCCCGAGAACGCGTAGTTG
ATGCTCTAACGCGAAAGCATTCAAACCTTGAGACCCCCCCCCCCTACCTC
CTGATGCATGCGTGCGCGAAACCCCGGGGGATAAAGATTTTCCAGAGAAG
TTGAAAATTGTTGTGGACGGGATGGGAAAACCGTATTTGTGTCACCTTTG
ACTAACTTTAGAAAAAACGATCCAGCCATCAGCCATGGATCGATCGATTC
TGTAGAAGCAATGAAAGCTCCATCCTCCGTAGAACGCGTGGTCAAATGTC
TAACAGCTACGTAATTCAAAACTTGACTACCTCCTCCCACCTACATACAA
ACCCCGGGGATAATTCACAATTGACCCCCCCTACCGACGCTCCCCTTCGC
CTCTCCGGGGTTGATGACGTGCGCGTACTCTTGGTGCCTGCGTTGCCCCT
TTTTTGTTATCGAGAAGGCCGTGGCCGTTTCTGTTGTGTGTGGGGTCGCC
TGCCTCTTCGGCCGATGGCCTTCTCATTTGTCTTCCTCGACTACATGTGC
GGTTCAAGAGGGCACCCGAAGAAAAACTGAGTTCGTCGGGGTCCCCGGCG
ATGCGGTTGAGATTTCCCGGGAGAAGGCGGTGTTGCTCGTCGACGGCAAC
TGACTTGGTCTGTTGGATCGCCAGTTGACTACTCGTACAACCACAAGTTC
CAACTTTCGCAGCCTTGGGCGCGATCTGGACGAACGATTCCGAGCTCGGT
TGGGGAGGGAGGTGGGGGGGGTAAATAGTTCAGATAACATCTACGTCGTC
CTGCTGATTGGGGAGAGTTAAAAAGTTTATTCGCGCTTACTAATTATGCT
GCATTTGGTGGGAAGAGGAAAAGTCAGACACACCCCGCGTTTTTTGGCGA
CCTCCAGTTGGTATTGTTGTTGCTATAGTGGCTAGCCATCTACAGCACTC
TCTCTCTAAATATATATTAGGTATAGCCCTCGTTCTGTTGGTGGTAGATG
GGTGAGGCACGCCCAAGTTACGCCCGCGATCTTTTGTTCCCCCTTGTTGC
CTCGACCCTAAGCCGGAACAAGCAAGCGCTGGTGCGTGCTCTTGGACTGG
TGCGTGCTCGCGATCGAGGACGTGATGCGCTGTTGCTTAAGTTTGTCCAC
TGGGACAGTGCATGCCGGGCAGATCTGGCTGTGATCGTTCGTTCTTGTTA
GTTGCGTCCCTCTCGCGCGCTTTCGTCACCGTCGTCGCGTGGTCCAAAGC
TTCGCGCCCGCCAGCCCTTGTGGAAGCAACGCTTTAAGTTATAGCGATTC
CGGGCTTGGGAGGGTGGACCTCTTGGCTTTTGTTTTTGTATATTTTGCCG
ACGGGCTCCGCTCTTTTGAGAAAACGGACCACTCTATATACTCTTCGTTG
TGTTACCGTTTGTTTGTTTTTTCTATTATTTATTCAAACTAAGAGGTGAA
TTCCTGTTTTTGGAGGCGTGTTTCCGGTATCCCTGCCACATAGGGCGATC
GATGTCACGCTCGCTTGATGAAAGTTACCTCCATGAACGCTGATGCCGTT
GGCGAGCGGGTATTCGTTGCGGTATTGATTGGAGAAAATTACGACATATA
TTTTGACTTTTGTGTAGATTATCCTAGAAGGGTCGATGGAGGAAGAGAGA
GAGAGAGTCAATCGAAGTTGAAAAGTTAAGGTGTACAGTGCATTTGGGCC
TTATCGTCGTCCCCACGGACGGTGCCATTGATTCTGACTCTTGCCGCTCT
ACCGTACGCACTACTGCGCTGCGTGACAGACAGTACTGTATTGTTAGTAT
CGCAACTGGGCGAAAGGTGGTTCTTGCCCCCCACCCCCCCCCCTCTTCCA
CAACGCTGTCCATCCCTCCCTATGGTCCTAAGGTCTCTGCTACCCATCAC
GCT
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Coding sequence (CDS) from alignment at H-elongata_contig14962:852..6954-

>mRNA_H-elongata_contig14962.3317.1 ID=mRNA_H-elongata_contig14962.3317.1|Name=mRNA_H-elongata_contig14962.3317.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1980bp|location=Sequence derived from alignment at H-elongata_contig14962:852..6954- (Himanthalia elongata Himel1 dioecious)
ATGCCGGACGCAGCGGCTGGAGCCGACGTGGTGCAGAGGGCGATCGAGCA
GGCCAAGACTTGTCTGCAGAAGGACGGCCTCAACGTGTGCTTGGACGCCG
AGGGCCGCGCTACGGCTCTGTATGCCGGACGCAGCGGCTGGAGCCGACGT
GGTGCAGAGGGCGATCGAGCAGGCCAAGACTTGTCTGCAGAAGGACGGCC
TCAACGTGTGCTTGGACGCCGAGGGCCGCGCTACGGCTCTGTACACTTAC
ATATCTCAGTGGTACCTGAGCCCGAAACAGCACGTGATCGAGATGGGGGC
CTCCATTCTCCTCCTCGCCCCTTCGAGCTTCCTGTGGTTCAGAGCCTGCC
GAGCGCGGGCGCGCCTGCAGCGCGCGGGGGACACGTTTGACGTAATCTCC
CCGCCCTGGACGATGCGGCTCTGGGGCATGATGCTCGTGGCATGCGTCGG
CGCGGGAGCCTTCTTCAAGTTTTCCAGAAACGAGCTGGTCTCCCACCCCG
CCTATATCTGGCAGCCGTGCCACGTACACAGCGTCGTGATGGGTATGTGC
TCATTCTTCGCAAGAGAGTGGTCACTTCTGGTGATGCACGTGGCAACGAC
GCTCTGGTGGGGGCCATTCCTGGCGTTCATCGCGCCCTCCCTTCCCAGCG
ACCCCGTGGAGGTCGTGATATTCTGGATCCAGCACTCCCTAATGCTTTTG
GCGCCCTTCATGAGGTTGTTGATCGGGGGGCGGTGGATGTACAGACACTT
ACATATCTCAGTGGTACCTGAGCCCGAAACAGCACGTGATCGAGATGGGG
GCCTCCATTCTCCTCCTCGCCCCTTCGAGCTTCCTGTGGTTCAGAGCCTG
CCGAGCGCGGGCGCGCCTGCAGCGCGCGGGGGACACGTTTGACGTAATCT
CCCCGCCCTGGACGATGCGGCTCTGGGGCATGATGCTCGTGGCATGCGTC
GGCGCGGGAGCCTTCTTCAAGTTTTCCAGAAACGAGCTGGTCTCCCACCC
CGCCTATATCTGGCAGCCGTGCCACGTACACAGCGTCGTGATGGGTATGT
GCTCATTCTTCGCAAGAGAGTGGTCACTTCTGGTGATGCACGTGGCAACG
ACGCTCTGGTGGGGGCCATTCCTGGCGTTCATCGCGCCCTCCCTTCCCAG
CGACCCCGTGGAGGTCGTGATATTCTGGATCCAGCACTCCCTAATGCTTT
TGGCGCCCTTCATGAGGTTGTTGATCGGGGGGCGGTGGATGTACAGGGAT
TTCTGGTGGAACTCCGTGGGGTTTTTGTTTTTGACTTGCTATCATTGGTG
GTGGCTTGCTCCGGTCAACATCGTCACGGGGGTGAACGTTGCGACCATGA
CGGTACCGCCCGACTCTTTGGTAGGGCTCGGGAAATACTACCGTCTAGTG
TGGGGGGTGGCGTGTATCATGCTTCAGGGATTTCTGGTGGAACTCCGTGG
GGTTTTTGTTTTTGACTTGCTATCATTGGTGGTGGCTTGCTCCGGTCAAC
ATCGTCACGGGGGTGAACGTTGCGACCATGACGGTACCGCCCGACTCTTT
GGTAGGGCTCGGGAAATACTACCGTCTAGTGTGGGGGGTGGCGTGTATCA
TGCTTCAGGCCGTGGCCGTTTCTGTTGTGTGTGGGGTCGCCTGCCTCTTC
GGCCGATGGCCTTCTCATTTGTCTTCCTCGACTACATGTGCGGTTCAAGA
GGGCACCCGAAGAAAAACTGAGTTCGTCGGGGTCCCCGGCGATGCGGTTG
AGATTTCCCGGGAGAAGGCGGTGTTGCTCGTCGACGGCAACTGAGCCGTG
GCCGTTTCTGTTGTGTGTGGGGTCGCCTGCCTCTTCGGCCGATGGCCTTC
TCATTTGTCTTCCTCGACTACATGTGCGGTTCAAGAGGGCACCCGAAGAA
AAACTGAGTTCGTCGGGGTCCCCGGCGATGCGGTTGAGATTTCCCGGGAG
AAGGCGGTGTTGCTCGTCGACGGCAACTGA
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