mRNA_H-elongata_contig14897.3279.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14897.3279.1
Unique NamemRNA_H-elongata_contig14897.3279.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: D1J798_ECTSI (Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 RepID=D1J798_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 1.950e-156
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVP+IGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: CYB6_THAPS (Cytochrome b6 n=103 Tax=cellular organisms TaxID=131567 RepID=CYB6_THAPS)

HSP 1 Score: 412 bits (1058), Expect = 3.740e-145
Identity = 194/215 (90.23%), Postives = 206/215 (95.81%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            MGKVYDWFEERLE+Q+IADDI+SKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPS+ +AF+SVEYIMT VNFGWLIRSIHRWSASMMV+ML+LHVFRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQVGFWACKIVTGVP AVPI+GPP+V +LRGG SVGQSTLTRFYSAHTFVLPL AA LM+THFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEVQAIADDISSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVVDAFASVEYIMTSVNFGWLIRSIHRWSASMMVMMLVLHVFRVYLTGGFKKPRELTWVTGVILAVVTVSFGVTGYSLPWDQVGFWACKIVTGVPAAVPIVGPPLVLVLRGGESVGQSTLTRFYSAHTFVLPLAAAVLMLTHFLMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: J9QUX6_9STRA (Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 RepID=J9QUX6_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 1.520e-144
Identity = 193/215 (89.77%), Postives = 207/215 (96.28%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            M KVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRP++S+AF+SVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGV L   T SFGVTGYSLPWDQVGFWACKIVTGVP+++P++GP +V +LRGGVSVGQSTLTRFYSAHTFVLP+VAAALM+THFLMIR+QGISGPL
Sbjct:    1 MSKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPTVSDAFASVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVLLGAVTASFGVTGYSLPWDQVGFWACKIVTGVPDSIPVVGPLLVGVLRGGVSVGQSTLTRFYSAHTFVLPVVAAALMLTHFLMIRQQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: A0A0D3M5L9_9STRA (Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A0D3M5L9_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 3.580e-143
Identity = 188/215 (87.44%), Postives = 207/215 (96.28%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCFGGI  TCFL+QVATGFAMTFYYRP++++AF+SVEY+MTE NFGWLIRSIHRWSASMMVLM+ILHVFRVYLTGGFK+PRELTWVTGV L+V TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+P+IG P+V+LLRGGVSVGQ+TLTRFYS HTFVLPL+AA LM+THFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTDAFASVEYLMTEANFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKRPRELTWVTGVLLSVITVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVIGSPLVELLRGGVSVGQATLTRFYSLHTFVLPLLAAVLMLTHFLMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: CYB6_GUITH (Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=CYB6_GUITH)

HSP 1 Score: 404 bits (1039), Expect = 2.940e-142
Identity = 187/215 (86.98%), Postives = 206/215 (95.81%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI FTCF++QVATGFAMTFYYRP+++EAF+SVEYIMTEVN+GWL RS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGVTLAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+P++G  +V+LLRG VSVGQ+TLTRFYSAHTFVLP+ AA LM+THFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFIIQVATGFAMTFYYRPTVAEAFASVEYIMTEVNYGWLFRSMHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVTLAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVVGSLLVELLRGSVSVGQATLTRFYSAHTFVLPVAAAVLMLTHFLMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: A0A516ZA38_9STRA (Cytochrome b6 n=4 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA38_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 2.080e-140
Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            M KVYDWFEERLE+Q+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMT YYRP++ EAF+SVEYIMT+VNFGWLIRSIHRWSASMMV+M++LHVFRVYLTGGFKKPRELTW+TGV LAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVP++G  ++ LLRGGVSVGQSTLTRFYSAHTF+LP+ A  LM+THFLMIRKQGISGPL
Sbjct:   12 MSKVYDWFEERLEVQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTVYYRPTVVEAFASVEYIMTQVNFGWLIRSIHRWSASMMVMMMVLHVFRVYLTGGFKKPRELTWITGVILAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPVVGTTVLYLLRGGVSVGQSTLTRFYSAHTFILPVAAVVLMLTHFLMIRKQGISGPL 226          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: CYB6_GRATL (Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID=CYB6_GRATL)

HSP 1 Score: 397 bits (1019), Expect = 3.300e-139
Identity = 187/215 (86.98%), Postives = 203/215 (94.42%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGIVFT FL+QVA+GFAMTFYYRP+++EAFSSVEYIMT+VNFGWLIRSIHRWSASMMVLMLILH+FRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQ+G+WA KIVTGVPEA+P++G  IV+LLRGGVSVGQSTLTRFYS HTFVLPL+ A  M+ HFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGIVFTSFLIQVASGFAMTFYYRPTVAEAFSSVEYIMTDVNFGWLIRSIHRWSASMMVLMLILHMFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVVGGSIVELLRGGVSVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: W0RYI6_PORPP (Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=W0RYI6_PORPP)

HSP 1 Score: 395 bits (1016), Expect = 9.450e-139
Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            MGKVYDWF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCF++QVA+GFAMTFYYRPS++EAFSSV YIMT+VNFGWLIRSIHRWSASMMVLM+ILH FRVYLTGGFK PRELTWVTGVTLAV TVSFGVTGYSLPWDQVGFWA KIVTGVPEA+P++G  +V+LLRGGVSVGQ+TLTRFYS HTFVLPL+ A +M+ HFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFQERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFIMQVASGFAMTFYYRPSVAEAFSSVSYIMTDVNFGWLIRSIHRWSASMMVLMMILHSFRVYLTGGFKTPRELTWVTGVTLAVLTVSFGVTGYSLPWDQVGFWAVKIVTGVPEAIPVVGSSLVELLRGGVSVGQTTLTRFYSLHTFVLPLLTAVVMLMHFLMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: CYB6_EMIHU (Cytochrome b6 n=10 Tax=cellular organisms TaxID=131567 RepID=CYB6_EMIHU)

HSP 1 Score: 393 bits (1010), Expect = 7.760e-138
Identity = 185/215 (86.05%), Postives = 202/215 (93.95%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            M  VYDWF+ERLEIQ+IADDITSKYVPPHVNIFYC GGI  TCF+VQVATGFAMTFYYRP+++EAF+SVEY+MTEVNFGWLIRS+HRWSASMMVL +ILHV RVYLTGGFKKPRELTWVTGV LA  TVSFGVTGYSLPWDQVG+WACKIVTGVP+AVPI+G  IVQ+LRGGVSVGQSTLTRFYSAHTFVLP+VAA LM+THF+MIRKQGISGPL
Sbjct:    1 MSSVYDWFQERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFIVQVATGFAMTFYYRPTVTEAFASVEYLMTEVNFGWLIRSVHRWSASMMVLNMILHVCRVYLTGGFKKPRELTWVTGVLLASVTVSFGVTGYSLPWDQVGYWACKIVTGVPDAVPIVGGLIVQVLRGGVSVGQSTLTRFYSAHTFVLPVVAAVLMLTHFVMIRKQGISGPL 215          
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Match: A0A170TME3_9CHLO (Cytochrome b6 n=2 Tax=Palmophyllaceae TaxID=2201466 RepID=A0A170TME3_9CHLO)

HSP 1 Score: 393 bits (1010), Expect = 7.760e-138
Identity = 184/215 (85.58%), Postives = 200/215 (93.02%), Query Frame = 1
Query:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645
            M KVY+WF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMTFYYRP++++AF SV Y+MT VNFGWLIRSIHRWSASMMVL +ILH+FRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVP IGP +V+LLRG VSVGQ+TLTRFYSAHTFVLPL+ A  M+ HFLMIRKQGISGPL
Sbjct:    1 MSKVYNWFDERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTFYYRPTVTDAFESVSYLMTSVNFGWLIRSIHRWSASMMVLTMILHIFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPFIGPIVVELLRGSVSVGQATLTRFYSAHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14897.3279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J798_ECTSI1.950e-15699.53Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 R... [more]
CYB6_THAPS3.740e-14590.23Cytochrome b6 n=103 Tax=cellular organisms TaxID=1... [more]
J9QUX6_9STRA1.520e-14489.77Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 ... [more]
A0A0D3M5L9_9STRA3.580e-14387.44Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 Re... [more]
CYB6_GUITH2.940e-14286.98Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=... [more]
A0A516ZA38_9STRA2.080e-14086.05Cytochrome b6 n=4 Tax=Dictyochophyceae TaxID=39119... [more]
CYB6_GRATL3.300e-13986.98Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID... [more]
W0RYI6_PORPP9.450e-13986.05Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=... [more]
CYB6_EMIHU7.760e-13886.05Cytochrome b6 n=10 Tax=cellular organisms TaxID=13... [more]
A0A170TME3_9CHLO7.760e-13885.58Cytochrome b6 n=2 Tax=Palmophyllaceae TaxID=220146... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14897contigH-elongata_contig14897:2262..2909 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.7
Seed ortholog evalue4.1e-121
Seed eggNOG ortholog2880.D1J798
Preferred namepetB
KEGG koko:K00412,ko:K02635,ko:K02705
KEGG Pathwayko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152,M00161,M00162
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.electron transfer activity
EggNOG OGsCOG1290@1,KOG4663@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko03029
Hectar predicted targeting categoryother localisation
Exons1
Model size648
Cds size648
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929881.469157-CDS-H-elongata_contig14897:2261..29091622929881.469157-CDS-H-elongata_contig14897:2261..2909Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14897 2262..2909 +
1691679193.838946-CDS-H-elongata_contig14897:2261..29091691679193.838946-CDS-H-elongata_contig14897:2261..2909Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14897 2262..2909 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14897.3279.1prot_H-elongata_contig14897.3279.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14897 2262..2909 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14897.3279.1

>prot_H-elongata_contig14897.3279.1 ID=prot_H-elongata_contig14897.3279.1|Name=mRNA_H-elongata_contig14897.3279.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVAT
GFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILH
VFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKI
VTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMI
THFLMIRKQGISGPL*
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mRNA from alignment at H-elongata_contig14897:2262..2909+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14897.3279.1 ID=mRNA_H-elongata_contig14897.3279.1|Name=mRNA_H-elongata_contig14897.3279.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=648bp|location=Sequence derived from alignment at H-elongata_contig14897:2262..2909+ (Himanthalia elongata Himel1 dioecious)
ATGGGTAAGGTTTATGATTGGTTCGAAGAAAGATTAGAAATTCAATCAAT TGCTGATGATATTACAAGTAAATATGTCCCACCACATGTTAATATATTTT ATTGCTTTGGTGGTATTGTTTTTACATGTTTTTTAGTTCAAGTAGCAACA GGATTTGCAATGACATTTTATTATAGACCAAGTATTAGTGAAGCTTTTTC ATCGGTTGAATATATTATGACTGAAGTTAATTTTGGTTGGTTAATACGTT CTATCCACCGATGGTCTGCAAGTATGATGGTTCTTATGCTAATTTTACAT GTTTTTCGTGTATACTTAACAGGTGGATTTAAGAAACCTCGCGAATTAAC ATGGGTTACTGGTGTAACTCTAGCTGTAACTACAGTTTCTTTTGGTGTAA CAGGTTATTCTTTACCTTGGGACCAAGTAGGATTTTGGGCCTGTAAAATT GTAACTGGGGTACCTGAAGCAGTTCCTATTATTGGACCACCAATAGTTCA ATTACTACGTGGAGGAGTTAGTGTAGGTCAAAGTACTTTAACACGTTTTT ATAGTGCACACACTTTTGTTTTACCTTTAGTTGCGGCAGCTTTAATGATT ACACATTTTTTAATGATAAGAAAACAAGGTATTTCAGGACCTCTATAA
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Coding sequence (CDS) from alignment at H-elongata_contig14897:2262..2909+

>mRNA_H-elongata_contig14897.3279.1 ID=mRNA_H-elongata_contig14897.3279.1|Name=mRNA_H-elongata_contig14897.3279.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig14897:2262..2909+ (Himanthalia elongata Himel1 dioecious)
ATGGGTAAGGTTTATGATTGGTTCGAAGAAAGATTAGAAATTCAATCAAT
TGCTGATGATATTACAAGTAAATATGTCCCACCACATGTTAATATATTTT
ATTGCTTTGGTGGTATTGTTTTTACATGTTTTTTAGTTCAAGTAGCAACA
GGATTTGCAATGACATTTTATTATAGACCAAGTATTAGTGAAGCTTTTTC
ATCGGTTGAATATATTATGACTGAAGTTAATTTTGGTTGGTTAATACGTT
CTATCCACCGATGGTCTGCAAGTATGATGGTTCTTATGCTAATTTTACAT
GTTTTTCGTGTATACTTAACAGGTGGATTTAAGAAACCTCGCGAATTAAC
ATGGGTTACTGGTGTAACTCTAGCTGTAACTACAGTTTCTTTTGGTGTAA
CAGGTTATTCTTTACCTTGGGACCAAGTAGGATTTTGGGCCTGTAAAATT
GTAACTGGGGTACCTGAAGCAGTTCCTATTATTGGACCACCAATAGTTCA
ATTACTACGTGGAGGAGTTAGTGTAGGTCAAAGTACTTTAACACGTTTTT
ATAGTGCACACACTTTTGTTTTACCTTTAGTTGCGGCAGCTTTAATGATT
ACACATTTTTTAATGATAAGAAAACAAGGTATTTCAGGACCTCTATAAAT
GGGTAAGGTTTATGATTGGTTCGAAGAAAGATTAGAAATTCAATCAATTG
CTGATGATATTACAAGTAAATATGTCCCACCACATGTTAATATATTTTAT
TGCTTTGGTGGTATTGTTTTTACATGTTTTTTAGTTCAAGTAGCAACAGG
ATTTGCAATGACATTTTATTATAGACCAAGTATTAGTGAAGCTTTTTCAT
CGGTTGAATATATTATGACTGAAGTTAATTTTGGTTGGTTAATACGTTCT
ATCCACCGATGGTCTGCAAGTATGATGGTTCTTATGCTAATTTTACATGT
TTTTCGTGTATACTTAACAGGTGGATTTAAGAAACCTCGCGAATTAACAT
GGGTTACTGGTGTAACTCTAGCTGTAACTACAGTTTCTTTTGGTGTAACA
GGTTATTCTTTACCTTGGGACCAAGTAGGATTTTGGGCCTGTAAAATTGT
AACTGGGGTACCTGAAGCAGTTCCTATTATTGGACCACCAATAGTTCAAT
TACTACGTGGAGGAGTTAGTGTAGGTCAAAGTACTTTAACACGTTTTTAT
AGTGCACACACTTTTGTTTTACCTTTAGTTGCGGCAGCTTTAATGATTAC
ACATTTTTTAATGATAAGAAAACAAGGTATTTCAGGACCTCTATAA
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