Homology
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
A0A1L3HS58_ECTSI (Epoxyalcohol synthase CYP5164B1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A1L3HS58_ECTSI)
HSP 1 Score: 405 bits (1040), Expect = 6.750e-127
Identity = 205/353 (58.07%), Postives = 252/353 (71.39%), Query Frame = 1
Query: 1 QNGPYFGPLKCSKEYLDGSLPALVTNIPEYHSAVRAYTLGILRERLGSTQTAISHSSDKFYANMWVNGLGDYPGVYDCFLQQSYAFMLEWVFGTGEEGGQALPSFKDFVTVNPKDISVLLNLEMDTKVANAVASLGQRFAG-VTKEQKASIEVLLDSIRSSKMFTKFVEMQKDYNIDITNIENSFMFNTGFQSSSAIAKNMEYCVGSLSANRDFLEELRAELDGQELTLKTVGDTDRFPLLDSFHWEILRIFPAPPFFFKEAKEDLQIPTNSGKKYQARLAISLPPTTAPPMXXXXXXXXXXSNTPEMLHCYHPLVHIDPAAFGPDATEFKPKRFVGNPDLKKKVSFSKLVPK 1056
Q G FGPLKC +EYL LPALVTN E H R Y + +LRERL +T T + H++ FY ++W NG+GDY VYD FLQQSYAF+LEW+FG GEEGGQ LP +KDF+TVNP D+SVL+ LE+DT VAN V+ + Q AG V+ E+KASIEVLL++IRSSKM+ F +M ++ + +++ FMF +GFQSSSA+AKNMEYCVGSL+AN DFL ELRAELDGQELT+K+V D RFPLLDSFHWEILR++PAP FFFK A+ DL +PT+SG +YQ R +ML C+HPL+HID A FG DATEFKPKRF+GNP LK V F+ PK
Sbjct: 81 QKGQRFGPLKCKEEYLGKGLPALVTNAMEKHEGARDYIVAVLRERLAATDTTLEHATANFYKDLWANGMGDYTTVYDLFLQQSYAFVLEWIFGMGEEGGQPLPPYKDFLTVNPADLSVLIGLEVDTPVANLVSMVAQAVAGGVSSEEKASIEVLLEAIRSSKMWPSFTKMLEESGLPTQDMDKMFMFFSGFQSSSALAKNMEYCVGSLAANPDFLAELRAELDGQELTIKSVSDAKRFPLLDSFHWEILRLYPAPQFFFKTAQMDLVVPTSSGARYQVRKG-------------------------DMLCCHHPLIHIDEAVFGADATEFKPKRFIGNPGLKDDV-FAYAFPK 407
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
A0A6H5KGZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ6_9PHAE)
HSP 1 Score: 323 bits (827), Expect = 1.490e-95
Identity = 168/344 (48.84%), Postives = 222/344 (64.53%), Query Frame = 1
Query: 1 QNGPYFGPLKCSKEYLDGSLPALVTNIPEYHSAVRAYTLGILRERLGSTQTAISHSSDKFYANMWVNGLGDYPGVYDCFLQQSYAFMLEWVFGTGEEGGQALPSFKDFVTVNPKDISVLLNLEMDTKVANAVASLGQRFAGVTKEQKASIEVLLDSIRSSKMFTKFVEMQKDYNIDITNIENSFMFNTGFQSSSAIAKNMEYCVGSLSANRDFLEELRAELDGQELTLKTVGDTDRFPLLDSFHWEILRIFPAPPFFFKEAKEDLQIPTNSGKKYQARLAISLPPTTAPPMXXXXXXXXXXSNTPEMLHCYHPLVHIDPAAFGPDATEFKPKRFVGNPDLKKKV 1032
Q+G YFGP+KC KEY+ SLP L+TN E H R L R R+ Q+A+++++D FY N+ NGLGDY VYD FLQQ+ F+ EW++G G EGGQ LP FKDF+ NP D+SVLL LEMDT VAN A L QR + E+ A++E + ++IRSS ++ F+EM + N++ ++E SFMF T FQS+ AIAK M V +L+ N +FLE+LR E+DG++LT +++ + FPLLDSFHWEI R+FPAP F KEAK DL +PT+SGKKYQ + E+L L +DP+ FGPDA EF P+RFV NP+LKKKV
Sbjct: 117 QDGAYFGPIKCKKEYIGESLPTLITNQKESHQTFRQQALRAFRSRVPFAQSAMTNATDTFYKNLRDNGLGDYTVVYDFFLQQTIHFLHEWIYGLGVEGGQPLPPFKDFMNANPLDVSVLLELEMDTPVANLAAKLAQRSKRPSAERLAAVESIAEAIRSSDVWAGFLEMFEGSNVNTKDLERSFMFTTNFQSAGAIAKGMMPVVATLTNNPEFLEKLRKEVDGKDLTFQSIRGAENFPLLDSFHWEINRMFPAPAFTVKEAKMDLVVPTSSGKKYQVKKG-------------------------ELLMMEQALGQMDPSVFGPDAREFNPERFVDNPELKKKV 435
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
D8LQS9_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS9_ECTSI)
HSP 1 Score: 209 bits (532), Expect = 3.380e-57
Identity = 114/236 (48.31%), Postives = 150/236 (63.56%), Query Frame = 1
Query: 325 VTVNPKDISVLLNLEMDTKVANAVASLGQRFAGVTKEQKASIEVLLDSIRSSKMFTKFVEMQKDYNIDITNIENSFMFNTGFQSSSAIAKNMEYCVGSLSANRDFLEELRAELDGQELTLKTVGDTDRFPLLDSFHWEILRIFPAPPFFFKEAKEDLQIPTNSGKKYQARLAISLPPTTAPPMXXXXXXXXXXSNTPEMLHCYHPLVHIDPAAFGPDATEFKPKRFVGNPDLKKKV 1032
+ NP D+SVLL LEMDT VAN A L QR + EQ AS+E + ++IRSS ++ FVEM +D N++ ++E SFMF T FQS+ AIAK M V +L+ N +FLE+LR E+DG++LT +++ + FPLLDSFHWEI R+FPAP F KEAK DL +PT+SGKKY+ + E+L L +DP+ FGPDA EF P+RFV NP+LKKKV
Sbjct: 1 MNANPLDVSVLLELEMDTPVANLAAKLAQRSKKPSAEQLASVESIAEAIRSSDVWAGFVEMLEDSNVNTKDLERSFMFTTNFQSAGAIAKGMMPVVATLTNNPEFLEKLRKEVDGKDLTFQSIRGAENFPLLDSFHWEINRMFPAPAFTVKEAKMDLVVPTSSGKKYKVKKG-------------------------ELLMMEQALGQMDPSVFGPDAREFNPERFVDNPELKKKV 211
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
A0A6H5JAC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC4_9PHAE)
HSP 1 Score: 204 bits (518), Expect = 3.490e-56
Identity = 106/173 (61.27%), Postives = 123/173 (71.10%), Query Frame = 1
Query: 538 IENSFMFNTGFQSSSAIAKNMEYCVGSLSANRDFLEELRAELDGQELTLKTVGDTDRFPLLDSFHWEILRIFPAPPFFFKEAKEDLQIPTNSGKKYQARLAISLPPTTAPPMXXXXXXXXXXSNTPEMLHCYHPLVHIDPAAFGPDATEFKPKRFVGNPDLKKKVSFSKLVPK 1056
++ SFMF TGFQSSSA+AKNMEYCVGSL+AN DFL ELRAELDGQELT+K+V D RFPLLDSFHWEILR++PAP FFFK A+ DL +PT+SG +YQ R +ML C+HPL+HID A FG DATEFKPKRF+GNPDLK V F+ PK
Sbjct: 4 MDKSFMFFTGFQSSSALAKNMEYCVGSLAANPDFLAELRAELDGQELTIKSVSDAKRFPLLDSFHWEILRLYPAPQFFFKTAQMDLVVPTSSGARYQVRKG-------------------------DMLCCHHPLIHIDEAVFGADATEFKPKRFIGNPDLKDDV-FAYAFPK 150
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
A0A0H5QQ31_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QQ31_9EUKA)
HSP 1 Score: 113 bits (282), Expect = 2.710e-22
Identity = 89/342 (26.02%), Postives = 146/342 (42.69%), Query Frame = 1
Query: 16 FGPLKCSKEYLDGSLPALVTNIPEYHSAVRAYTLGILRERLGSTQTAISHSSD---KFYANMWVNGLGDYPGVYDCFLQQSYAFMLEWVFGTGEEGGQALPSFKDFVTVNPKDISVLLNLEMDTKVANAVASLGQRFAGVTKEQKASIEVLLDSIRSSKMFTKFVEMQKDYNIDITNIENSFMFNTGFQSSSAIAKNMEYCVGSLSANRDFLEELRAELDGQELTLKTVGDTDRFPLLDSFHWEILRIFPAPPFFFKEAKEDLQIPTNSGKKYQARLAISLPPTTAPPMXXXXXXXXXXSNTPEMLHCYHPLVHIDPAAFGPDATEFKPKRFVGNPDLKKKV 1032
FGP+ + + + P L + H RA T+ +L R+ Q A S+ +F + G G Y ++D L+ S + EW+ G +AL ++ + L + DT + + +A+ + K A+ + L S ++ +F +M +D ++E M ++ + + + L + L LR E+DG +LTL ++ D+FPLLDSF WE +R+F P FKEA+ D++IP GK Y + E++ PL DP+ F EF RF+ NP+LKKKV
Sbjct: 136 FGPIGIPEYIMKTAWPVLTASDAFGHKVNRALTVAVLHSRMPLLQAAFDRSASLAYQFIFEKYAEGNGPYRNIHDVALKISGDLIYEWLLGCRPPSWEALTTYP---------FNALSMINTDTWIGDQLATFFSKAMVWYKNGYATRDESLKIYHRSPVYKEFEKMAQDMGFPTKDMEYWLMMFMQLNGTAGLGLPLCQALSVLGDQQTILSLLRDEVDGHQLTLDSM---DKFPLLDSFAWETMRLFIRPTILFKEAQRDVEIPAGDGKLYVVKKG-------------------------ELVVVNVPLASRDPSVFD-HPFEFNAHRFMKNPELKKKV 439
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
A0A6H5KDN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN7_9PHAE)
HSP 1 Score: 87.0 bits (214), Expect = 2.110e-16
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 1470 RQVFAYGFPNPADPSPKDGMPWGCAVHTLGVLDAILKVFYGRWVQEAEWEMTEPAIIDHIEYLGVVGPDGMSFAKVTPRK 1709
R VFAYG+ AD G+ WG A H +G+LD ILK+ YGRWV+EAEWE+T +I E++ VGP +SFAKVT RK
Sbjct: 56 RMVFAYGY---ADDDKVAGV-WGWAAHAVGLLDGILKIVYGRWVEEAEWELTSVPVIFPDEFVATVGPADLSFAKVTSRK 131
BLAST of mRNA_H-elongata_contig1485.3262.1 vs. uniprot
Match:
D8LQS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS7_ECTSI)
HSP 1 Score: 68.2 bits (165), Expect = 1.470e-9
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 QNGPYFGPLKCSKEYLDGSLPALVTNIPEYHSAVRAYTLGILRERLGSTQTAISHSSDKFYANMWVNG 204
Q+G YFGPLKC K+Y+ SLP L +N E H +R + L + R R+ Q+A+++++D FY N+ NG
Sbjct: 87 QDGAYFGPLKCKKQYIGESLPTLASNQKESHQVLREHKLRVFRSRVPFAQSAMTNATDTFYKNLRDNG 154
The following BLAST results are available for this feature:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1485.3262.1
>prot_H-elongata_contig1485.3262.1 ID=prot_H-elongata_contig1485.3262.1|Name=mRNA_H-elongata_contig1485.3262.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=311bp
MWVNGLGDYPGVYDCFLQQSYAFMLEWVFGTGEEGGQALPSFKDFVTVNP
KDISVLLNLEMDTKVANAVASLGQRFAGVTKEQKASIEVLLDSIRSSKMF
TKFVEMQKDYNIDITNIENSFMFNTGFQSSSAIAKNMEYCVGSLSANRDF
LEELRAELDGQELTLKTVGDTDRFPLLDSFHWEILRIFPAPPFFFKEAKE
DLQIPTNSGKKYQARLAISLPPTTAPPMPLPPPTPPPPSNTPEMLHCYHP
LVHIDPAAFGPDATEFKPKRFVGNPDLKKKVSFSKLVPKCEIKNTGESIT
LERIGRTPIM*
back to topmRNA from alignment at H-elongata_contig1485:1444..11912+
Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1485.3262.1 ID=mRNA_H-elongata_contig1485.3262.1|Name=mRNA_H-elongata_contig1485.3262.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=10469bp|location=Sequence derived from alignment at H-elongata_contig1485:1444..11912+ (Himanthalia elongata Himel1 dioecious)
CAGAATGGACCCTACTTCGGCCCCCTAAAGTGCTCCAAGGAGTACCTGGA
CGGTTCCTTGCCGGCGCTTGTGACAAACATCCCGGAGTACCACTCGGCCG
TCCGCGCCTACACCTTGGGGATCCTGCGGGAAAGGCTGGGCAGCACCCAG
ACCGCGATCTCGCACTCCTCCGACAAGTTTTACGCAAATATGTGGGTCAA
CGGTGAGAGCAGAGCACAGTGGGCACTTTCGACTCCGTCCAACCTATCAT
CAAGGTAGATACAGTACAAAACATCGACCTTGCCAGCAACATTTCTTGGA
GTAAGCCGGTTCTCATAGATTGTACTGTACGTGCAAGTTTGATTGATTGG
TCACGCCGAACAAGGTGGAAGGTAGAAAAAAAGGTTGGGGGGAGGGCGTA
AGGGGACAAAAGGGGAGCGCGTTCATACATTATTGCGTTGTTGGCGATCA
TGTTTTGTATGTATGTATATAATAATTGAGTTTTACGCGTGGCAGCGCCC
GTACATGTGGATTGGTTGCTTCTGAGAGCAACAAAGCGATCGCAGGAATA
TATTATAACAAAAAACAGCAACCATAAAACAGAGACGACACGGAAATACA
CAAAACCATAATTGTCCGAGACTGACTTCGAACTCCCAGAGGCCGAAAAT
ACAGCTTCCTACAGTCCTGTTGACATGAACCCATGATTATTGGTGTAAAA
AAAACATACACGAACGCAGTTCCTGCCCTCGTAGCGCTAAAGTCAAGGCA
GAAACACCTTCTCGATATTCTCGACAGCCCTGGCAACATTATACCAGTAT
ATACATATATATATTATATACTGGTACGGAGTATATATTATATCACCCAT
GACTCACCATGCCTCACGAAGTAACCAGGTTCAATGTACTTGGGCAAACT
TTCAGCATGTTGCTTTCTTCGTGGGAGCAGAGCCAACGACAATTTACTTC
CTCTTAACTAGCTCCTTCAGAAAGTTATGGCGAAGAAGTGCTTGCTGTGC
CCAAACTTCTTGGACTTCATAGCCGATGCTTAAGCCCTCTTTTTGTCCTT
GTGCGCATGAATAACCCCGCCGTAAAGGGAGAGGTGCAGCCCAGGGGGCC
AGCTATCGTCAGGTTGGAATGTGGACATTACTACCTTAGAGTACGAAATC
CTCACATGCGATTAATCTTGTTCCCGAATAGTAAACTTAATAGGGCAACA
GCATAATATCAATATCAATATCAATATCAATATCGGGGAGTCCATCATTA
TCATGTACACCTATATTATTTATCATTTACTGTATCATGTGAAGACGCCA
AGCCAGAGCTTAGAGAGTGGACTGCAATTAGGAACGTTTTTTTATTAGAA
GGGTTATTTTCTGTCACACATTATCTAAACTAGGAAGGGTTTGATAATAG
TACTGCTTCATTCATTATTCGGATTAGATGAAGGGTACAGTGTTTAGGCT
TGGGCATAGAGGAATGTTCTTAATTTTCATCGATCAGTCAGCGTCAAGAC
GTAAGCAGGTAATCGGTCTTATTCTAGAGGATATAGGTTTGTTGTATCAT
AGATATATATATATATCTGTGATGATTTCAGATCTTAGCTATTAGAAAAA
CGCAGGTTCCTTTCTGCAAGCGTATGGGCAAACCTAGGGAGGATTTGACA
ATAAGAACACCTTTCAAATTATTGCTAAATAGAGGCAAGAAGAAAATGAA
CATCGATCCATAAAGATGCCGTTAGAGGGTGCCGTTAGAGGGTGCCGTTA
GAGGGTCATGGACGACACTCAACTTGTATCTTGCCCGAGATTTGAAGCGT
GAGGTACACATTTCATCTCTCGGAAGTCCAGCGCTATGGATCACAAGGAC
AGTCCTCGTGGGGTCGCACCAGGCGCTTGACATTTTTATTTAAAAACATA
TGAGCTCATTCAAACCCTCCAAACACCCACGCCTTCTTAGCACCGTGAGA
AGTGCAGTGAATTCACCCAGAATACAAATAAATACAGATTCCCATGCCAA
AACAGTTTAAAAATAATCACTGCTTAGTTGGGTGACCCGTTCCCCGCCTC
TCGATATCGTGAGAGCCACGTGGTGAATCCTCTGGTGGTGAGTGATACGT
TACATGGCGGACGACCTCGATCATATCGGACGAAGGAAGGGCATCGCTTT
GGAGACCCAATAATCTCCCAACAAACTCTAGCTTTCTTCCTACCCTTGCT
GGCCCTGAGTACGCCTCTCTGGCCCTCTCCAACCGTCCCGATGACGTTGC
CACCCCCGCTGCTAATTCCACCCTCAGGACTGGGGGATTACCCAGGCGTG
TACGACTGCTTCCTCCAGCAGTCTTACGCTTTTATGCTGGAGTGGGTGTT
CGGCACCGGAGAGGAAGGCGGGCAAGCACTTCCCTCGTTCAAGGATTTCG
TCACCGTTAACCCGAAAGATATCAGCGTGTGAGTCCCCTTCTTGTTTTGT
GTATCGGGTGGTCTTATATCCAGGAGAGGGGGTAGATGGGAGAGGGATGA
AGAGATGGGGGAAAGAGGAGATGAGTTCCCACACATGCATCTGTGGGTTT
CAATACCTAATAAGTGGCTGCGCGCTATCGATTATTTTGTCCTGATGCGT
TGCACAACGGGGCAGCGAGATGAGGACATATTCTGCAGCCAACTAGTATG
GAGTGCCACACCACCTACACGTTTGGTCATTGAAATCAAATATGTCCAAT
GCCACCGCACCTCTGTACCCTGTCTGCCGTACATGTACACAGCAAAAAGA
GCCAATGGGGAGGCATATTTGAAATGCTTACCTTTGTTCTTGTTTCAGTG
GGAGAAGCGGGAGGAAACAGACTTGGCGCGTGCGGCTGATCAAAAATACA
TAAGCTCGTCGGATTCGGAACGTTAGGAGTTTTCTCGGCCGGAGATGAGA
CAGCGAGGCCGTCACGATACGCTAAACATACGTTCCTCGATTTCGCGAGA
GCGATATTTCAGAAGCACTCCTCCCCCCATCACATCATAATATATATATA
TATATATATACTATACTATTCTTGGCATTCTACTACTTGAACAGGCTGCT
CAATCTGGAGATGGACACGAAGGTGGCCAATGCTGTGGCGTCCCTGGGTC
AGCGGTTTGCGGGGGTTACCAAGGAGCAGAAGGCTTCGATAGAAGTCCTG
CTAGACTCCATCCGCTCCTCCAAGATGTTCACCAAGTTCGTCGAGATGCA
GAAGGATTATAACGTGCGCGTTGTGCTGTAAAACGGTCTAAAACACAGTA
CGGTACTCAATAGTACATTTTCTTATCAAGTTGCCGAGAACTCTCTTCTA
TCGTAGCTTACCAAAGCCGCGTGAAGCTGCCAGTATCATTTGAACATAGT
CAGACAGTTTCTGTTGCCGGTACCCGGCATTCCGTATAGAGTGCCGTAGG
GGGAACATAAACCACCCCCCCTTGATTACCGTAAAGCTATCTGTAACATG
GGATTTAGCCTTTTCACGATTCTCCCACCGAGTTTCGTCGTAAATTACGG
TGATCACGAAAGACAAAAGAGATTTCAGTGGAGTACCCGCCATTTGTAAC
GCGCGACGTCATCGTATACTCGACGTCTGCAGAGAGCTTCCTTCCCCCCT
CCCTGGCAATGCACCCCGGGGGTTAAAATACCCGCTTGCTTTGCCGAGCC
CCGGGGAAGCACACAAACAGGTAATTATTGTTATCATGTTGAATATCACC
CCTTCCCCCCACTTAGATACGAATGAGCGACTAGCTATTGGAATGATGAA
TACTGCGGATTTGAAAAGGGGCTCGTCGGGGCTTGCGGCTGAGGCGCCCG
CCTTAGGCCAAATAAAATATTTTTTGTGCCTTCTAAGATAACGATTCAAA
CGAATTAACAAATAAATTGTGGCAATAGCTCAAACTCTTCTTATAAATAA
AAATATTTCTTACGCCCCCTATCGAAACATCGTATGTTTCTTTACTGCTC
ACGACATTTCTTCGAAGCACTGAACGCGCCCGCGCGCCTCAAAATACTCG
AGGGGGGAGGGGGAGGGTGTTAACGATCCTCACATGTCTTGGGACATTGA
CCGATTCGTCTAATTTTCGCTGCTGGCTTTTTCATTTTAGGCTTAATCCA
GATCTTTCAGGGTGTATATCAATTCCTTTTTTGATTTGCGGAACCTATAG
TGTAAACTTATAAAAATGGCCGAACCGATGTTGCCGGTCGCGAGGTGACA
TGGTCTTATTTTACTTACCACGGAATGTTTATAAGCACGGCAATGCCAGC
CATAACACACCCGACTACGATGACCAACTTTGGCCACCGCAACTCCAAGC
AATATATCGCGCGAAAGAGGTGGCAGTCCTTTGTAGTCGTCGCTTTGCGG
TATTAACGGTAATCACGATTATTTTAATTTCCTTTGTTTGTTAATGTTTT
GTATTTGAGTAATTGGAGCCATGTGTATCTGGCGGCTATATGGAAATAAG
CCATGGGACAACCGTTTCGCCTTTGCTCTATTTTACTGCGCTGTCGTATG
AATGGAGACGTTAGATCATTAGTCCGGGAGAGTAAGGCGACGCAAATTCA
CGCACTGAAGTTGCGCTGGCTTGCAGCGCCCGCCGCTACAGGAGGCCGCC
GTCATGGTCCTAAGGGGAACCAGCAACGAATCGCTTTGACTCGGGTTCCC
ATTTAAACATGCGTAGACACAATGGTCTTGTAGCCAAGACGACTAAATGC
CGCGACCTTAACATTTTAGCCGTGGGGACAGAAACGCTTCTCCTACGAAG
AGATTGATTGGTCTTGCACTGGTGTGGATTGTGCGCTTTCAAGAGGGTGG
CCAACGGCATACACTTCGTTAGCACCGTGTAGATCCATGTAATCGTAGCC
GAAGTACCAAAGGGAGGCCACTGTCTCGTACATTGCCATCCGATTAACGT
CGGGGTCTTAACACAAACGTTTAAGGCGATGTAATGACATACCCTTGGTA
CCCCTAGACTATTTTCAACAGGTTCAAGCAAAGCGCTGTTGCTTCTAGAT
GGACGTCAGTGCTCATCCAATCAAAGCACGATACTTCACATTTTACGTTT
TCGTGTTTGAAAAGGAACTGCGATACCGTCTCACTGCTGCGATCGCTTGC
TGTGCCTCCTGCACCGTCACATGTTCTTTTGTGTGGCCGCAAAAACAGAT
TGATATCACGAACATCGAGAACTCATTTATGTTCAACACGGGCTTTCAGT
CGTCTTCCGCCATCGCAAAGAACATGGAGTACTGTGTGGGATCCCTCAGC
GCCAACCGCGACTTCCTCGAGGAGCTCCGCGCGGAGCTCGATGGCCAGGT
GCGAACGAGAACAAAAAATCTCCCAAGAAAACTCCCACTGAAAAGGAAAC
TCGACTAATTTCGCTTTACATTTTTGTCCTGACAGCTAAGAATGCACACA
CTTGAATCTGACAATGATCGATGATGGATTATGGATTTTGCCGAAACCAA
TGAAAGGAAGGTGTGAAATGTTCGGAGGGTGTGAATGACTTCAGTTTTAA
AAGAAAGCACAAACATTGAAAAATATAAAAAAACGTCCAGAGCGCCGCCA
CAGGTAGATGCGCCGACGATTCGTGATCTTGTACTTGCGTGTCGGTCTGC
CTCCGCATATATTTATATATATATATATATATATATATAATATCTAACTA
TGGCATTTGTATCACATTCGACTATATAATACTTTATGTAATGTATAATA
TACATACTGATTGGTTAATAGATTAAATCCAACATATTTTTATTAAAAAC
ACATATGAACTCATTATAACCCTCCGAACATCCACGCCTTCTTAGCACCA
TGAGAGGTGTAGTCCAGGGGAAAAACTATCGTCAAATGGCTAAACCTTTT
CTTTCAGCAAGAGCTTAGCATCCGATTCCTGTGTGCTATGTAGGATTGAT
AGCGAGAAGGAAGAAAAGGGGCATAAACAAACGTCTTTCGAGGTTATCGT
ACATTTTATTTTGTGCATTGCCTATTACTTGTCCCTTACTGAAATGTAGC
CAGAGCAGAGCCGTTTCAACACAGATACTGTATTTCGTAGCTGCTCGGGT
GAGCTCAATGGACATCGTTGCGCGGCACGGCGATTGATATAATTTTATGC
CAAACCTTTGCGTTTCGCCAATCGTTTATCACCCTCTTACTGTTCCGTAA
ACGAATGTGGATGATGCCTCGTGGAGCCCAGGAATTGACCCTCAAGACCG
TGGGCGACACGGACAGATTCCCTCTATTGGACAGCTTCCACTGGGAGATA
TTGCGCATATTTCCGGCCCCGCCGTTCTTCTTCAAGGTTGGGACTTTACT
GCTGCAGCACGTTCAAGGGTTCCTCATTTGTATCGCGTCCAGCTTTGTCC
AAGGGTTCCTCGTTTCACCTCAGCTCTTCGCGTACCCCATGCGCCTTCGT
TTATGAAATGGCCCAGTTTACACTTGTTGGCGAAAGATCGGGCATCATCA
TATTCTAAGGAACCGGGAGCAGTATCACTTTGGGAGAGATGCATAGATAC
CATGTAGAGCTATACCACGTAAACTGGCCGTGAAATATCCGTACTCGGCT
ATATTAAGCCCCCACTCCCCCAACCCGCGCTCTTCTCATCCTCGGCTGCC
TATGGAAATGCAATCACTCCGTCGTGGTCGTACCGAGCGGCTTCCTCTCA
GGTTTGGTTCACCTTTTTCTGCCTTGCACGTTAATGTTTGCATCCTTTAT
CGGCAGTTTTGCTTTAGATATATTTAGTACCCTCTCGCTCCTATCTTATA
CCCCCATTGCCTCCAAAACTGCGCTTTCGCTTCTACCCCGCTGCCTTGAA
TGGAACTCCTTCAGGAGGCGAAGGAGGACCTCCAGATCCCCACCAATTCG
GGCAAGAAGTATCAGGCACGGTTGGCTATTAGCCTGAAAAGGCCACAGTT
TTAGTCTATAGCAGTACTTATTACATTCATGTAATTATGTACTACATATG
TTACAAGCACTGCATTTCCGCCATCCTTACCGACAGTCGGCCTTTTGACG
GAGAAGTGGCCCTGTCCAATGGAGATCCGAGCAAAGCCTGGGAGGAGGAA
AATCATTTTGACATTTGCTCCAAATGCTTAAAAGTAGACACTCGATATCA
AATCGTGGTATTCTTTAACTGAAAACCTTTTTGGAGGCGATTAAATAGCA
TGATTTTAGTGCAGAACTGTAGGCAAAAAGCCCCGACATCCGTTGAAGGA
AACGTTTAGCGAAAATGGTTAGAAACACGTCGTCCACGACTCCTTCGCTG
ATGAGAGATGAGGCACATAAAATCATGCCTTCAGATGTTCAGGGGCGAAC
CACCCGGTTGAAGCTCGAGCTCCTTTTTCTTCGCTTACCCCCCCCCCCCC
CCCCTACCACCGCCCCCCCCATGCCTCTCCCCCCCCCCACCCCCCCCCCC
CCCAGCAACACCCCCGAAATGCTTCACTGCTATCATCCACTGGTCCACAT
TGATCCCGCAGCGTTTGGCCCTGACGCCACAGAATTCAAGCCAAAGCGCT
TCGTCGGAAACCCAGACCTCAAGAAGAAAGTGAGCTTTTCAAAATTGGTG
CCGAAATGCGAGATTAAGAATACGGGGGAAAGTATAACACTCGAGAGAAT
AGGACGGACGCCTATTATGTAGACCGAATGTACTGGCGAGTGAGCGTGCC
GCGTGCAACTGGCGGATGGCAGCAGACCCAGAATAATGGCACTGGGCCCT
GGCTTTAGCGTGTGGGGTTATACAGGGGTAAATTGGCTTGGCATATTTCG
AAATTCCTTGACCTGCGCGGCGCGAGGAAGCTAGATTTTTGAGGGCAGGC
ATGTTGTCCTGTTATCGTCGTATACCTGGTACGTATTTATTCCCTCCCTT
TCGCCCCCCTTACCCCTCCCGGCACATACCTGTCACATAAACAAAAGTGG
TTGTATTTTAAACTAGAATGTTTTTGCTCCGCAGCAGTCTTTTCCACGCA
AGCGGTTGCTCGTTACCCCCGGCAGGTGTTCGCCTACGGGTTCCCTAACC
CTGCGGACCCCAGTCCCAAGGATGGCATGCCATGGGGTTGCGCCGTACAC
ACCTTGGGAGTTCTTGACGCCATCCTGAAAGTCTTCTACGGGAGGTTAGA
AAAAGAAAACGTACTCGCGCCGCCCGTCCTTTCTGTCGCTTTCACGCTGT
GGTACAATTTCCTCCTTGCCACATACAAAGACAGTTAATATCCGTTGTGA
TTTATTTTTTATTTCGACGGCAGGGTGGAAACCGTAAATATTTATTTCTA
TTGATGGATATATTGTTGATGCTTCAGCTCTGTTGCGGTCCTTGGAACAA
AAAGCTCGGTCGAGTTTGAGCCAGTGGTGCCTTAAACAAGAGACATATGT
AAATTTAATGCATGATCTAATCGTGGTAACCTCGGTCCCCGAAGTTCCAC
TCCAACTCGAAATTGCCTTTGAAAGCTGACGCTCAGAAAGTCCAAAATAT
TTAACTAGATTGTAAGCCACTTTACCTTATTACGGAAGTTTGCTGGACAT
ACGACATCAAAAGTGGTGCTAATATAGCAGCAGCAGTACTCTGCGTCACT
TTCAGTCTGTTCGTGACTCGATGTGAGCTGCAATTTCTACAGAGGTCCTT
CGATTCCGTAAAGCGAGAGAGCTCGATGGGACCGTGGCTTCCGTACTTGA
CCCATGCTGGTGTGTGTGGGGGGCACCCTGCTATCATCCATATCCAGACA
TCACCAGCTGTTTTTCCTTTGTTTTTTCTTCTTTATCGTAGGACATGCCG
CGCATTCCAACTTACTTGCGCCTTCTCTCTTAATAATGTGCCTCGATGAA
CATCAGGTGGGTACAGGAAGCAGAGTGGGAGATGACGGAACCAGCCATCA
TCGACCACATCGAGTACCTGGGTGTGGTTGGGCCCGATGGCATGTCCTTC
GCCAAGGTTACGCCTCGCAAGTAGTAAGAGGTTCGAGATCTTCTCTTGGC
GGTTATGGCTGACGTCTGACCAGGACGCCCAGAATATGAGAGATTTATAT
ATTGTGTTCCAAGTGACGGTTTCTGTCCAGGATCCTCTCTATAATAGAGT
CGATTCACTGTATGGTATTGATTCTTCCTCAGGAACGAGGGGAGGACACC
GTAGTGGGTGTGGTGTTCTATATTATTGGACGGAATAATGTTAGAATATG
ACGTCACAGAGAGATGTAAGTGCCCCTTTGAAGCTAGGATAATGTCCTCT
TGCAATTGTATCTGGCGTTGTTCGACCCTCTGCATGCCGTATTACGTCTT
GGGAAGTAGGGTAGAGAAACTATAGCTTCTCGCTGCTCCATATTTCGAAC
ACTAATTAGAGAAGGGCATGACCAATAAGAAGGAATATGCTCCGGGGATA
TGTAGTTACAATTTGAAGTCAGGCTAGCACGCTCTCGAAGCAGCGAGAAA
CCTACCTATTGAGAGTGGCGTTGCACGACCCCCTGCATGTCGGTATTCTT
GCTCCGGAAGTAGAATGGGAATACTGTGAATGTTGATATACATTGAATGC
TTCTTAACTAGACCACGCACATGCGAAATAGTGACGTTGCGAAAAGGGGC
GCGTTGTAGCTTGAAGTCACGCTAGCGTGCTCTTGAGACGCCGGTGAACC
TAATTGATCTGGCAATACCAGACCCTCTGAATACCGTATTCCTTCTCGGA
AATCAGGGTGAAGATTGTCATTTAAAGCCACGCCCGCGAGCCCTTAAGGC
GTCGGTTAACACCTCTCACCTGGTATTTCTGGGTCTTTGCTTCTAGCTGG
CCATTGCCGATCAGATCAACAAGTGGTTAAGTCGTCCGCTCATTGACTTT
TCCGACGGTTTTGCGCCCGGGTAGGCGCCTCATACGAGGAAGTGGCGTGT
TTTGCCTCTTCTTCCAATATATTTGCGGTTATCCACTGGTGCAAAAATAG
TGGCATTCGTATACTGCATGTACTGGTAATGTATATACTGGTGAGCTTCT
CGCAAGGTACCAGGCCGTTTGGACGTTACAACAATAAATATTGGTGTTCG
TGGTGGAGTCACTCCTTGTATATCGACGGATGGCTAAGTACGAGGTATAG
CTCTATCGCATTCAAGAGGATCGAGGTTTGTAAACCAGCAAATACCGCCA
TGTTCGCCGCGAGCAAAATAGATCTTGATTTCATTGGGGTTTTATTTTTG
TTTTTGTTTTTTAATTCTCACATAAGTTGATGTCAAAATCCAGCCCGTGG
TCACAAGGATGAAAACACCATTCGGAAGGAAAAAACGTTCAACGTGCTCT
CCAATACAAACGGAAACGGCAATGCTGCATAATGCCCCTACCCGGAGAAA
ACGACACCTTAAAAAAACACACACACAAAAGGAGAACATATACACGAACC
GCGTGTGGCTATCGGGACGCGTACCTACTGGAGAACGATTGAACGAAGAG
CCACGGGTTCAGTGAAAGCAAAAAAAGACGAAAACGAAAGAAAACAAGAT
TACGCCAGAGAAAGGCAAT
back to topCoding sequence (CDS) from alignment at H-elongata_contig1485:1444..11912+
>mRNA_H-elongata_contig1485.3262.1 ID=mRNA_H-elongata_contig1485.3262.1|Name=mRNA_H-elongata_contig1485.3262.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1866bp|location=Sequence derived from alignment at H-elongata_contig1485:1444..11912+ (Himanthalia elongata Himel1 dioecious)
ATGTGGGTCAACGATGTGGGTCAACGGACTGGGGGATTACCCAGGCGTGT
ACGACTGCTTCCTCCAGCAGTCTTACGCTTTTATGCTGGAGTGGGTGTTC
GGCACCGGAGAGGAAGGCGGGCAAGCACTTCCCTCGTTCAAGGATTTCGT
CACCGTTAACCCGAAAGATATCAGCGTGACTGGGGGATTACCCAGGCGTG
TACGACTGCTTCCTCCAGCAGTCTTACGCTTTTATGCTGGAGTGGGTGTT
CGGCACCGGAGAGGAAGGCGGGCAAGCACTTCCCTCGTTCAAGGATTTCG
TCACCGTTAACCCGAAAGATATCAGCGTGCTGCTCAATCTGGAGATGGAC
ACGAAGGTGGCCAATGCTGTGGCGTCCCTGGGTCAGCGGTTTGCGGGGGT
TACCAAGGAGCAGAAGGCTTCGATAGAAGTCCTGCTAGACTCCATCCGCT
CCTCCAAGATGTTCACCAAGTTCGTCGAGATGCAGAAGGATTATAACGCT
GCTCAATCTGGAGATGGACACGAAGGTGGCCAATGCTGTGGCGTCCCTGG
GTCAGCGGTTTGCGGGGGTTACCAAGGAGCAGAAGGCTTCGATAGAAGTC
CTGCTAGACTCCATCCGCTCCTCCAAGATGTTCACCAAGTTCGTCGAGAT
GCAGAAGGATTATAACATTGATATCACGAACATCGAGAACTCATTTATGT
TCAACACGGGCTTTCAGTCGTCTTCCGCCATCGCAAAGAACATGGAGTAC
TGTGTGGGATCCCTCAGCGCCAACCGCGACTTCCTCGAGGAGCTCCGCGC
GGAGCTCGATGGCCAGATTGATATCACGAACATCGAGAACTCATTTATGT
TCAACACGGGCTTTCAGTCGTCTTCCGCCATCGCAAAGAACATGGAGTAC
TGTGTGGGATCCCTCAGCGCCAACCGCGACTTCCTCGAGGAGCTCCGCGC
GGAGCTCGATGGCCAGGAATTGACCCTCAAGACCGTGGGCGACACGGACA
GATTCCCTCTATTGGACAGCTTCCACTGGGAGATATTGCGCATATTTCCG
GCCCCGCCGTTCTTCTTCAAGGAATTGACCCTCAAGACCGTGGGCGACAC
GGACAGATTCCCTCTATTGGACAGCTTCCACTGGGAGATATTGCGCATAT
TTCCGGCCCCGCCGTTCTTCTTCAAGGAGGCGAAGGAGGACCTCCAGATC
CCCACCAATTCGGGCAAGAAGTATCAGGCACGGTTGGCTATTAGCCTGAG
GCGAAGGAGGACCTCCAGATCCCCACCAATTCGGGCAAGAAGTATCAGGC
ACGGTTGGCTATTAGCCTCCCCCCTACCACCGCCCCCCCCATGCCTCTCC
CCCCCCCCACCCCCCCCCCCCCCAGCAACACCCCCGAAATGCTTCACTGC
TATCATCCACTGGTCCACATTGATCCCGCAGCGTTTGGCCCTGACGCCAC
AGAATTCAAGCCAAAGCGCTTCGTCGGAAACCCAGACCTCAAGAAGAAAG
TGAGCTTTTCAAAATTGGTGCCGAAATGCGAGATTAAGAATACGGGGGAA
AGTATAACACTCGAGAGAATAGGACGGACGCCTATTATGTAGCCCCCCTA
CCACCGCCCCCCCCATGCCTCTCCCCCCCCCCACCCCCCCCCCCCCCAGC
AACACCCCCGAAATGCTTCACTGCTATCATCCACTGGTCCACATTGATCC
CGCAGCGTTTGGCCCTGACGCCACAGAATTCAAGCCAAAGCGCTTCGTCG
GAAACCCAGACCTCAAGAAGAAAGTGAGCTTTTCAAAATTGGTGCCGAAA
TGCGAGATTAAGAATACGGGGGAAAGTATAACACTCGAGAGAATAGGACG
GACGCCTATTATGTAG
back to top