mRNA_H-elongata_contig147789.3226.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A6H5LM87_9PHAE (CYTH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM87_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.270e-13 Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 1
Query: 1 KNMLEAAGFKLFASFRTDRTKYRLDGYTIDIDQAS-----FGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVKVGSFVFVLCSAACQQLAIIS 303
K +LEAAGF+ FAS RT+R KYRL + +DID+AS FG++V+E+E +S KE+ ++ SA D I LAR LG + E +PVK G V + +QL +++
Sbjct: 401 KRVLEAAGFEAFASLRTNRLKYRLGVFAVDIDRASGRQVEFGHEVVEIERIS-KES-DVLSARDSITALARSLGARREGESGRPVK-GKLVEYIIRNCPRQLEVLA 503
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: UPI000A2A9617 (thiamine-triphosphatase-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9617) HSP 1 Score: 62.4 bits (150), Expect = 1.840e-9 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 10 LEAAGFKLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVK 243
+E ++FASF+T RTKY+LD TID+D ASFGY V E+E + G E E+ A + +A+ LGI +E R V+
Sbjct: 141 VEKFDLQVFASFKTKRTKYQLDDVTIDLDIASFGYSVGEIEIVVGDEE-EVPQAKAKLETVAKKLGINWDESYRGKVE 217
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A2B4ST67_STYPI (Thiamine-triphosphatase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4ST67_STYPI) HSP 1 Score: 61.6 bits (148), Expect = 2.970e-9 Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 1
Query: 1 KNMLEAAGFKLFASFRTDRTKYRL-DGYTIDIDQASFGYQVIEVETM-SGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVKVGSFVFVLCSAACQQL 291
++M++ + FK A F T+RT Y++ DG +D+DQASFGYQV E+E + S +++ E+A + I K A +LGI+ P K+ +VF C + +QL
Sbjct: 120 EDMVQGSSFKQIACFTTNRTVYKMPDGVVVDLDQASFGYQVGELEVLVSSEKSVEVAK--ELIQKTAELLGIECRLNI--PSKLEEYVFNNCRSHHEQL 214
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A6P8I9Z9_ACTTE (thiamine-triphosphatase-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I9Z9_ACTTE) HSP 1 Score: 60.1 bits (144), Expect = 8.830e-9 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 28 KLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVKVGSFVFV 264
++FASF+T R +Y +DG ID+D ASFGY V E+E M G + +IA A I LA+ LGI + +Q K+G ++++
Sbjct: 112 RVFASFKTRRMRYEIDGLFIDLDSASFGYNVGEIEMMVGSKD-DIAGAEIKIESLAKRLGINWKT--KQHGKLGEYLYL 187
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A1G1ZBA3_9BACT (CYTH domain-containing protein n=3 Tax=Parcubacteria group TaxID=1794811 RepID=A0A1G1ZBA3_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 4.300e-6 Identity = 26/75 (34.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 34 FASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVKVGSFV 258
F S++T+R +++ +G+TID+D FG+ V+EVE M +E + A + I A+V+G++ + +Q KV F+
Sbjct: 105 FGSWKTNRRRFKKNGFTIDVDSVDFGHNVVEVELMV-EEGGDTEEAANRILNFAKVMGLEED---KQEGKVMVFI 175
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A8D2LI88_VARKO (Thiamine-triphosphatase n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LI88_VARKO) HSP 1 Score: 52.8 bits (125), Expect = 5.850e-6 Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 10 LEAAGFKLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVKVGSFVF 261
+E G + FASF T R+KYRL + +D+ FGY V EVE M +E E+ +A + I KL LG +E R P K+ ++++
Sbjct: 124 VEELGLQEFASFVTQRSKYRLGDLNVVLDEMDFGYAVGEVEAMVRQE--EVPAALEQIRKLGVHLGF--DETTRFPGKMSAYLY 203
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A358C0P0_9BACT (CYTH domain-containing protein n=1 Tax=Candidatus Uhrbacteria bacterium TaxID=2053634 RepID=A0A358C0P0_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 2.260e-5 Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 10 LEAAGFKLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHE 219
L A GF+ + ++T+RT Y+ DG+TI D+ FG+++ E+E + E ++ D I AR G++ E
Sbjct: 99 LTAIGFERISDYKTERTSYQKDGFTIVFDKMDFGFEICEIERVV-PEGTDLNQVADEILVFARKHGLKEE 167
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: A0A7S0KVG9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KVG9_MICPS) HSP 1 Score: 50.1 bits (118), Expect = 7.090e-5 Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 10 LEAAGFKLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGI 210
+ A G FA F T R K+ LDG ++D+D ASFG+ V EVE + A+++ A +A +A+ LG+
Sbjct: 187 MTALGVVPFAEFTTRRAKFELDGASVDVDAASFGHAVCEVEVLCAY-ASQVPDAEAKVAYVAQRLGL 252
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Match: UPI001E882877 (thiamine-triphosphatase n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI001E882877) HSP 1 Score: 49.7 bits (117), Expect = 9.110e-5 Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 10 LEAAGFKLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAEIASAGDGIAKLARVLGIQHEEGPRQPVKVGSFV 258
+E G + FA+F T R KY +DG ++D+D+A FGY V EVE + K+ ++ I ++ R LG EE + P K+ ++
Sbjct: 159 VEELGLEEFATFVTHRRKYHVDGLSVDLDEADFGYAVGEVEAVVTKQE-DVPVVLKRIQEVFRQLGF--EEKTKIPGKMSVYL 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147789.3226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147789.3226.1 >prot_H-elongata_contig147789.3226.1 ID=prot_H-elongata_contig147789.3226.1|Name=mRNA_H-elongata_contig147789.3226.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp MLEAAGFKLFASFRTDRTKYRLDGYTIDIDQASFGYQVIEVETMSGKEAAback to top mRNA from alignment at H-elongata_contig147789:597..1515+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147789.3226.1 ID=mRNA_H-elongata_contig147789.3226.1|Name=mRNA_H-elongata_contig147789.3226.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=919bp|location=Sequence derived from alignment at H-elongata_contig147789:597..1515+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147789:597..1515+ >mRNA_H-elongata_contig147789.3226.1 ID=mRNA_H-elongata_contig147789.3226.1|Name=mRNA_H-elongata_contig147789.3226.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at H-elongata_contig147789:597..1515+ (Himanthalia elongata Himel1 dioecious)back to top |