mRNA_H-elongata_contig1461.3144.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 5.650e-141 Identity = 224/410 (54.63%), Postives = 295/410 (71.95%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHR-EAGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVEQIEDNDTLVRFKR 1227
P CAVCS Y G+ C+KCS+ G IAL V++++ G+ VA+ SY +SG+ E +G V R +PLQ++KI++V WQILTQFTSVAN+ +P +YQ FLD+++ NFD+ WVLSAGC+ ++DFHDRLL++T+ PI ++ L YA A + S L+ V HKHVS+ LL+TFLVY+SVS+V+FQ FAC++LDD ++YLRADY IECD PKH VYAG MI +Y VGI ALY LF + DV R EA RE+ R T+DLW PY+PS +YYE+IECARR+LLAGVVVFI+PNTAAQIA+ L++A+ F +SE LAPY SRWD W+ R+GHAV+ +SMY+ALLLKV+VSDE +SQ FE++LV+ HV MV L+E I+ A L VE+ F+R
Sbjct: 564 PYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRR 973
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 455 bits (1170), Expect = 1.790e-139 Identity = 229/414 (55.31%), Postives = 300/414 (72.46%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVF--HREAGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVEQIEDN----DTLVRFK 1224
P CA+CSE Y C CS+ GGIALA A+ + G+ +VAV SY+ SG+ G+G V + R +PLQ++KI+VV WQI+TQFT+VANVTYP +YQNFL+ ++ NFD+SW+LSAGC++++DFHDRLL+ T+GPI A ++L TYA A+ + + L NVRHKHV M LL+TF VYSSVS+ +F+ FAC+ L+D ++YL ADY IECD KHK VYAG M+ +Y GI ALY+ LLF +RDV AG++ RA +TSDLW PYKPS +YYE++ECARR+LLAGVVVFI+PN++AQIAITLI+A F+ +SEGLAPY SRWD WI+R+GH V+ SMYLALLLKV+VS E +SQ FE +LV HV MV+ + E +++A LR E+ D D L RF+
Sbjct: 1198 PYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFR 1611
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 441 bits (1135), Expect = 6.500e-139 Identity = 225/398 (56.53%), Postives = 282/398 (70.85%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHREA-GREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVEQ 1191
P CA+CS+ Y G C+KC GGI LA A+ + G+FTVVAV SY+ G ++ R LPLQT+KI+VV WQI+TQFTS ANVTYPD+YQ FL+ +D NFDISWVLSAGC+++LDFHDRLLL+T+GPI A++ L TY N + L+ V +HVSM LL+ FLVYS VSSVVFQ FACD L+ YLRADY IECD KH+ VYAG MI +YPVGI A Y LL +RDV ++ GRE+ R + S+LW PY+PS YYYE+IEC RRILL G+VVFI+PNTAAQIAITLI+ + F +SE L PY WD W+SR+ HAV+FMS+Y+ALLLKV+VS+E +SQ FE +LV+ H M+LA +VE IL+ C RV++
Sbjct: 604 PYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKE 1001
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 1.140e-136 Identity = 225/396 (56.82%), Postives = 290/396 (73.23%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHRE-AGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRV 1185
P C++CS+ Y C++CS++ GGI LA + + + VAV SY++S + +G V + R +PLQ+ KI+VV WQILTQFT+VANVTYPD+YQ FLD + NFD+SWVLSAGCI+ +DFHDRLL++T+GPI A++ LC TYA A N + L+ + ++HVSM LL+T VYSSVSS +FQ FAC+ L D +YLRADY I CD KHK L VYAGVM+ VY VGI ALY LLF +RDV R A REE+ R +TS+LW PYKPS +YYE+IEC RR+LLAGVVVFI+PNTA QIAITL++A F+ VSEGLAPY SRWD W+SR+GHAV+F+SMY+ALLLKV+VS+E SQ FE +LV+ H M+L ++E +++ C L V
Sbjct: 1654 PYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTV 2049
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 445 bits (1144), Expect = 1.570e-136 Identity = 232/412 (56.31%), Postives = 305/412 (74.03%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSE-APGGIALAVAITIFGIFTVVAVFSYLLSGD--MERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHRE-AGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVEQIEDNDTLVRFK 1224
P C +CS+ Y E C+KCSE + GGIA+AV + + +F VAV SY+ SG+ M R G G V + R +PLQ++KI++V WQILTQFTSVANVTYPD+YQ+ LD +D NFD+SW+LSAGC+++++FH RLL++T+ PI A+++L TYA A N L + +KHV++ LL+TF VYSSVSS +F+ FACDDLD ++ YLRADYSIEC+ +H+ + VYAG MI +Y VGI ALYA LLF +RDV E REE R K+ S+LW PYKP+ +YYE+IEC RR+LLAGVVVFI+PNTAAQIA+TL++A F +SEGLAPY SRWD WISR+GH V+F+SMY+ALLLKV+VSDE +SQ FE++LV++HV M+L LVEA + A LR E+ + RF+
Sbjct: 1097 PYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKG-GIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFR 1507
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 1.950e-136 Identity = 220/407 (54.05%), Postives = 291/407 (71.50%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFH-REAGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVEQIEDNDTLVR 1218
P CAVCS+ Y C +CS G IALA + + + AV SY +SG + G V + + +PLQ++KI++V WQILTQFTSVANVTYPD+Y+ FLD +D NFD+SWVLSAGCI ++DFHDRLL +T+ P+ ++ L GTYA A+ N +L+ + +KHVS+ LL+TFL+YSSVS+ +F+ F C++L+D +YLRADY+I+CD KHK VYAG M+ VY VGI ALYA LLF +R V A RE++ R +TSDLW PYKPS +YYE+IEC RR+LLAGVVVFIFPNTAAQIAITL++A F+ VSEGLAP+ S+WDAW++R GH V+F+SMY+ALLLKV+VS E SQ +E +LV+ H M+LA + E ++ L+VEQ ++ T R
Sbjct: 843 PYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFR 1249
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 436 bits (1121), Expect = 4.320e-132 Identity = 217/389 (55.78%), Postives = 288/389 (74.04%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHRE-AG-REESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAI 1161
P C+VCSE Y + C +C + GGIA+ V + +F + +A+ +L+SG+ME +G ++ + +RLPLQ+IKI+VVVWQILTQF+SVANVTYPD+YQ FLD V+ LNFD+ W+ SAGC++E+DFH RLL+ T+GP+ A+ +L TY VA R+ SE AL+ +RHKH+SM LL+TFLVYSSVS+ VFQ FAC+DLDD++ YLRADY IECD +H+ V+AG+MI VYPVGI Y +LL+ +R V E AG R+ S + + SDLW PYKP R+YYE+IEC RR+ L GVVVFI+PNTAAQ+A+TL++A F+ S LAPY S+WDA IS +GH ++F SMY ALL KV+VSDE +SQ F +LV+ H MV+A +VE I
Sbjct: 1362 PYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETI 1750
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 2.440e-128 Identity = 201/391 (51.41%), Postives = 281/391 (71.87%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHRE-AGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMA 1170
P C++CS+ Y G +C+KC GGI AV + + +F V V Y++SG+ + + +PLQ++KI++V WQILTQF S ANV YP +YQ FLD + FD+ W++SAGC++++ FH RLL T+GPI A+++L GTYA A N + LR + KHV + LL+TFLVYSSVSS +F+ FACD+L+D ++YLR DY IECD KHK+ VYAG MI +YP+GI LY+ LLF +R+V ++ A R++S R K+TS+LW PYKPS +YYE+IEC RRILL G+VVFI+PNTAAQ+AITL++A FF +SE ++PY SRW+ W++R+GH V+ +SMY+ALLLKV+VSDE +SQ FE +LV++H M+L+ +VE ++A
Sbjct: 1014 PYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 415 bits (1066), Expect = 1.450e-125 Identity = 205/415 (49.40%), Postives = 288/415 (69.40%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLSGDMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHRE-AGREESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVEQIEDNDTLVRFKRPSIWF 1242
P C++CS Y G +C+KC GGIA AV + + +F V V Y++SG+ + +PLQ++KI++V WQI+TQF S ANV YP +YQ F+D + FD+ W+LS GC++++DFH RLL T+GPI A+++L GTYA A N + LR + KHV + LL+TFLVYSSVSS +F+ FACD+L+D +YLR DY IECD KHK+ VYAG MI +YP+GI LY+ LLF +R+V ++ A R +S R K+TS+LW PYKPS +YYE+IEC RR+LL G++VFI+PNTAAQ+AITL++A FF +SE ++PY SRW+ W++R+GH V+ +S+Y+ALLLKV+VSDE +SQ FE +LV++H M+L+ +VE ++A + R + ED RF+R F
Sbjct: 1074 PYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLREDVPA--RFRRGKFLF 1485
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 2.870e-122 Identity = 209/399 (52.38%), Postives = 276/399 (69.17%), Query Frame = 1
Query: 1 PDCAVCSEHYVEAFGLNCNKCSEA-PGGIALAVAITIFGIFTVVAVFSYLLSG-DMERNGQGFVNNIARRLPLQTIKIIVVVWQILTQFTSVANVTYPDIYQNFLDSVDFLNFDISWVLSAGCIIELDFHDRLLLTTLGPIAAIVILCGTYAVAMCRNCNSEIALRNVRHKHVSMALLVTFLVYSSVSSVVFQMFACDDLDDNRSYLRADYSIECDDPKHKLLMVYAGVMIFVYPVGIAALYAHLLFTNRDVFHREAG-REESFRAKATSDLWTPYKPSRYYYEIIECARRILLAGVVVFIFPNTAAQIAITLILALFFIFVSEGLAPYESRWDAWISRIGHAVIFMSMYLALLLKVNVSDETYNSQMAFETILVSIHVFMVLAALVEAILMACVLRVE 1188
P C+VCS Y E G C+KC E GGI + V + + + A++SY+ SG D G G++ + R +PLQ++KI++ WQILTQFTS+ANVTYPD+Y++FL +D NFD+ W LS C I++DFHDRLL++T+ PIAA++ L TY A L V+HKH SM LL+TF VYSSVSS++F+ FAC++L D + YLR+DY IECD KHK VYA MI VY VGI ALYA LLF +RD+ ++ R + R + +DLW PY +YYE+IEC RR+LLAGVVVFI+PNTAAQIA+TL++A F+ VSE L PY+S WD WI+R+GH V+F SM+L LLLKVNVSDE SQ FE +LV++H MV+A +VE +++ LR E
Sbjct: 1208 PYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLRAE 1606 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1461.3144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1461.3144.1 >prot_H-elongata_contig1461.3144.1 ID=prot_H-elongata_contig1461.3144.1|Name=mRNA_H-elongata_contig1461.3144.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=431bp PDCAVCSEHYVEAFGLNCNKCSEAPGGIALAVAITIFGIFTVVAVFSYLLback to top mRNA from alignment at H-elongata_contig1461:13836..16325- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1461.3144.1 ID=mRNA_H-elongata_contig1461.3144.1|Name=mRNA_H-elongata_contig1461.3144.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2490bp|location=Sequence derived from alignment at H-elongata_contig1461:13836..16325- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1461:13836..16325- >mRNA_H-elongata_contig1461.3144.1 ID=mRNA_H-elongata_contig1461.3144.1|Name=mRNA_H-elongata_contig1461.3144.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2586bp|location=Sequence derived from alignment at H-elongata_contig1461:13836..16325- (Himanthalia elongata Himel1 dioecious)back to top |