mRNA_H-elongata_contig13971.2762.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 1.790e-8 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVYE 132
Y+V+C+CG D G G C PC GD EICGG +AMSVYE
Sbjct: 206 YSVECWCGAEGADYDANGAGVCDMPCGGDADEICGGFYAMSVYE 249
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 1.940e-8 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVYE 132
Y+V+C+CG D G G C PC GD EICGG +AMSVYE
Sbjct: 376 YSVECWCGAEGADYDANGAGVCDMPCGGDADEICGGFYAMSVYE 419
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A6H5JW06_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW06_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 2.580e-8 Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVYE 132
Y+V+C+CG D G G C PC+GD +EICGG +AMSVYE
Sbjct: 239 YSVECWCGAEGADYDANGEGICDIPCSGDVNEICGGFYAMSVYE 282
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A6P4XE11_BRABE (IgGFc-binding protein-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XE11_BRABE) HSP 1 Score: 56.6 bits (135), Expect = 5.000e-8 Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVY 129
YA QCFCG A + + G C K C G++ EICGG W MSVY
Sbjct: 178 YASQCFCGTAAEFARLRSSGGCNKRCKGNSKEICGGTWRMSVY 220
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A8B6GEL1_MYTGA (WSC domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GEL1_MYTGA) HSP 1 Score: 51.2 bits (121), Expect = 1.980e-7 Identity = 26/53 (49.06%), Postives = 29/53 (54.72%), Query Frame = 1
Query: 4 AVQCFCGEATDDPTILGPGT----------CAKPCAGDTSEICGGVWAMSVYE 132
A QCFCG DDP GPG C K C GD+ +ICGG W +SVYE
Sbjct: 2 ANQCFCG---DDPYQYGPGDVSDYYLGDYDCDKQCCGDSEQICGGRWRLSVYE 51
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A8H3QLY2_9GLOM (WSC domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3QLY2_9GLOM) HSP 1 Score: 54.3 bits (129), Expect = 3.140e-7 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 10 QCFCGEATDDPT-ILGPGTCAKPCAGDTSEICGGVWAMSVYEYTYTS 147
QCFCG + D +LG G C+ C G+ S+ICG +WA+S+YE S
Sbjct: 218 QCFCGNSYDSMEGLLGSGYCSASCPGNNSQICGSIWALSIYEVPINS 264
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: UPI001459189B (uncharacterized protein LOC117321161 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001459189B) HSP 1 Score: 54.3 bits (129), Expect = 3.270e-7 Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVY 129
Y QC+CG+ D ++ C PCAG++ EICGG W +SVY
Sbjct: 85 YRTQCYCGDNHDRHSMASESDCNTPCAGNSKEICGGTWRISVY 127
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A8H4G5Q1_9EURO (Uncharacterized protein n=1 Tax=Aspergillus lentulus TaxID=293939 RepID=A0A8H4G5Q1_9EURO) HSP 1 Score: 53.9 bits (128), Expect = 3.470e-7 Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVY 129
+ QCFCG + D+ +L G CA PCAGD++E+CGG A+S+Y
Sbjct: 205 FGTQCFCGNSFDNGGVLTSG-CATPCAGDSTEVCGGSKALSMY 246
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A6H5JU45_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU45_9PHAE) HSP 1 Score: 53.9 bits (128), Expect = 3.620e-7 Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 1
Query: 1 YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVYE 132
Y+ +C+CG D G G C PC GD EICGG +A+SVYE
Sbjct: 149 YSEECWCGAEGADYDANGAGVCDMPCGGDADEICGGFYAISVYE 192
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Match: A0A2I1EFX3_9GLOM (WSC-domain-containing protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1EFX3_9GLOM) HSP 1 Score: 53.9 bits (128), Expect = 4.220e-7 Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 1
Query: 10 QCFCGEATDDPT-ILGPGTCAKPCAGDTSEICGGVWAMSVYEYTY 141
QCFCG + D +LG C C G+ S+ICGG+WA+S+YE Y
Sbjct: 216 QCFCGNSYDSINRLLGSEHCRASCPGNNSQICGGIWALSIYEVHY 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13971.2762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13971.2762.1 >prot_H-elongata_contig13971.2762.1 ID=prot_H-elongata_contig13971.2762.1|Name=mRNA_H-elongata_contig13971.2762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp YAVQCFCGEATDDPTILGPGTCAKPCAGDTSEICGGVWAMSVYEYTYTS*back to top mRNA from alignment at H-elongata_contig13971:6931..7080- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13971.2762.1 ID=mRNA_H-elongata_contig13971.2762.1|Name=mRNA_H-elongata_contig13971.2762.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=150bp|location=Sequence derived from alignment at H-elongata_contig13971:6931..7080- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13971:6931..7080- >mRNA_H-elongata_contig13971.2762.1 ID=mRNA_H-elongata_contig13971.2762.1|Name=mRNA_H-elongata_contig13971.2762.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=300bp|location=Sequence derived from alignment at H-elongata_contig13971:6931..7080- (Himanthalia elongata Himel1 dioecious)back to top |