mRNA_H-elongata_contig139656.2760.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig139656.2760.1
Unique NamemRNA_H-elongata_contig139656.2760.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 5.920e-44
Identity = 90/235 (38.30%), Postives = 139/235 (59.15%), Query Frame = 1
Query:   61 VMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSE----SGNLY-SFVLDLSADGYGAKE-------LAMNAVANVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGYK 729
            ++VDS A+ +Y D A+   ++  +++   L  P  I TA   +L+G   GVL G VT+D G    V   +++VPG+G NLFSV  A+  G+ ++F  +NPRLE  +  VP++ +    +G +  S  + L A+  G +        LA+  V    +WHRR+GH++ +SLD+LR++  +GI + G V DC  C +GK  Q  HPK A + V+ PFQL + D +GPFTP A+GG+K
Sbjct:  420 MLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRRVSFRVMLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALR-VETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFK 653          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.030e-43
Identity = 90/235 (38.30%), Postives = 139/235 (59.15%), Query Frame = 1
Query:   61 VMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSE----SGNLY-SFVLDLSADGYGAKE-------LAMNAVANVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGYK 729
            ++VDS A+ +Y D A+   ++  +++   L  P  I TA   +L+G   GVL G VT+D G    V   +++VPG+G NLFSV  A+  G+ ++F  +NPRLE  +  VP++ +    +G +  S  + L A+  G +        LA+  V    +WHRR+GH++ +SLD+LR++  +GI + G V DC  C +GK  Q  HPK A + V+ PFQL + D +GPFTP A+GG+K
Sbjct:  420 MLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALR-VETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFK 653          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.930e-41
Identity = 87/235 (37.02%), Postives = 135/235 (57.45%), Query Frame = 1
Query:   61 VMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSE----SGNLY-SFVLDLSADGYGAKE-------LAMNAVANVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGYK 729
            ++ DS A+ +Y D A+   ++  +++   L  P  I TA   +L+G   GVL G VT+D G    V   +++VPG+G NLFSV  A+  G+ ++F  +NPRLE  +  VP++ +    +G +  S  + L A+  G +        LA+  V    +WHRR+GH++ +SLD+LR++  +GI + G V DC  C +GK  Q  HPK A + V+ PFQL + D  GPFT   +GG+K
Sbjct:  325 MLEDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALR-VETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFK 558          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5JVF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF6_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 8.350e-39
Identity = 83/235 (35.32%), Postives = 127/235 (54.04%), Query Frame = 1
Query:   61 VMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRS------ESGNLYSFVLDLSADGYG------AKELAMNAVANVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGYK 729
            ++VDS A+ +Y D  +   L+  +++   L  P  I  A   +L G   G + G VT+D G+   V   +++VPG+G NLFSV  A+ KG+ T+F  +NPRLE  +V  P+++          +YS  + L  +  G      A +     V +  +WHRR+G ++ +SLD+LRK+    + + G V DC VC +GK  Q  HPK A + V RPFQ      + PFTP  +GG+K
Sbjct:  599 MVVDSGATDNYLDPGLTPGLRAHMRDVEHLRVPHTIVAAGQHVLKGVTTGTIFGAVTDDNGNDRHVSFRVILVPGLGTNLFSVTLAMLKGMATLFHPDNPRLESRDVVFPMQTLGVDATTGKRIYSIEVKLGGEPEGPTILGDAPDALALKVESADLWHRRMGRINGKSLDVLRKKQVNSVDYTGDVKDCSVCPLGKSAQQPHPKQATYGVLRPFQHVSVHTLRPFTPTVLGGFK 833          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5J9Q7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q7_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 3.190e-37
Identity = 85/231 (36.80%), Postives = 127/231 (54.98%), Query Frame = 1
Query:   73 SEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRS------ESGNLYSFVLDLSADGYGAKEL--AMNAVA----NVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGYK 729
            S A+ +Y D  +   L+  +++   L  P  I  A   +L G   G + G VT+D G+   V   +++VPG+G NLFSV  A+ KG+ T+F  +NPRLE  +V  P+++          +YS  + L  +  G   L  A +A+A    +  +WHRR+GH++ ++LD+LRK    G+ + G V  C VC +GK  Q  HPK A + V RPFQ    D + PFTP A+GG K
Sbjct:  350 SGATDNYLDPGLTPGLRAHMRDVEHLRVPHTIVAAGQHVLKGVTTGTIFGAVTDDNGNDRHVSFRVILVPGLGTNLFSVTLAMLKGVATLFHPDNPRLESGDVVFPMQTLGVDATTGKRIYSIEVKLGGEPEGPTVLGDAPDALALKVESADLWHRRMGHINGKNLDVLRKEQVNGVDYIGDVKYCSVCPLGKSAQQPHPKQATYGVLRPFQH---DTLSPFTPTALGGSK 577          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 6.270e-35
Identity = 79/254 (31.10%), Postives = 128/254 (50.39%), Query Frame = 1
Query:   55 ATVMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSESGNLYSFVLDLSADGYGAKELAMN------------------------------AVANVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGY 726
            A++++D+ AS +  DD +I  LK  ++   +LAKP+ +    G  L+G A G++H  V +  G+   V +  LVVPG+GRN+FS    +K G+  + +  NP L     T+PL+ +  ++    +D+       +  A                                A  N   WHR L HL+ +S+++LRK+   G+ F  +++ CD+CA+ K +QLAHP+  N +   P QL Y D MG  TP+A GG+
Sbjct:  134 ASLLIDTGASENMLDDRLIPGLKEIMRESKELAKPKVVSVGGGHELDGNATGLIHCTVKDSNGEKKAVLLRGLVVPGLGRNVFSRAAQIKNGVKLVIEEGNPHLAVGGHTLPLKQDPLDMGMCSVDIEFQAASEQTTASTKPTSHALPDDRAIGKPDTVMLDDDLGVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGF 387          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 6.800e-32
Identity = 83/236 (35.17%), Postives = 125/236 (52.97%), Query Frame = 1
Query:   61 VMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSESGNLYSFVLDLSADGY----GAKELA----------MNAVA----NVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVA 714
            ++VD+ AS   FD+ +I +    L ++ Q   P+ +  A    L GTA G+LH  V ++ G  + VRI  L+VPG+GRN+FS  + +K+G+  + +   P L      +PL  +  +     LD++ +      G K L            NAV     +   WHRRLGHL+A+SLDILRK  GT + +  ++S C VC + K +Q  HPK +  +++RP QL   D MGP  P A
Sbjct:  208 LLVDTGASEPMFDNRLIPD--GNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPA 441          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.400e-31
Identity = 82/234 (35.04%), Postives = 122/234 (52.14%), Query Frame = 1
Query:   67 VDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSESGNLYSFVLDLSADGY----GAKELA----------MNAVA----NVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVA 714
            V++ AS    D+ +I +    L ++ Q   P+ +  A G  L GTA G+LH  V ++ G  + VRI   +VPG+GRN+FS  + +KKG+  + +   P L      +PL  +  +     LD++ +      G K L            NAV     +   WHRRLGHL+A+SLDILRK  GTG+ +  ++S C VC + K +Q  HPK +  +++RP QL     MGP  P A
Sbjct:  175 VNTGASETMLDNRLIPD--GNLHDYTQRNSPKIVGVAGGRQLKGTATGILHCTVKDNRGQQLRVRIQGFIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTFQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPA 406          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5LL42_9PHAE (Peptidase A2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL42_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 7.920e-31
Identity = 83/248 (33.47%), Postives = 129/248 (52.02%), Query Frame = 1
Query:   25 ASQYSVNNNLATVMVDSEASGHYFDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSESGNLYSFVLDLSADGY--------------GAKELAMNAVA----NVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVA 714
            AS ++ ++    ++VD+ AS   FDD +I +    LQ++ Q   P+ +  A  + L GTA GVL+  V ++ G  + VRI  L+VPG+GRN FS  + +KKG+  + +   P L      +PL  +  +     LD++ +                 ++    NAV     +   WHRRLGHL+A+SLDILRK  GTG+    ++S C VC + K +Q  H K +  +++RP Q+   D M P  P A
Sbjct:   26 ASNFAASSTGVGLLVDTGASETMFDDRLIPD--GNLQDYTQRNSPKIVDVAGESQLKGTATGVLNCTVKDNQGQQLRVRIQGLIVPGLGRNSFSPTSLLKKGLRCVVEESTPHLAIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTTSVLPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGMDNRDSLSPCGVCQITKHKQSPHQKQSTRELSRPGQVVVIDNMEPGNPPA 271          
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Match: A0A6H5K9M6_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M6_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.240e-30
Identity = 78/225 (34.67%), Postives = 119/225 (52.89%), Query Frame = 1
Query:   94 FDDAIIRNLKHRLQNFVQLAKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNLFSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSESGNLYSFVLDLSADGY----GAKELA----------MNAVA----NVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDVCAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVA 714
            FD+ ++ +    L ++ Q    + +  A G+ L GTA G+LH  V ++ G  + VRI  L+VPG+GRN+FS  + +KKG+  + +   P L      +PL  +  +     LD++ +      G K L            NAV     +   WHRRLGHL+A+SLDIL K  GT + +  ++S C VC + K +Q  +PK +  +++RP QL   D MGP TP A
Sbjct:    2 FDNCLVPD--GNLHDYTQRNSLKIVDVAGGSQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLPIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILTKDTGTRVDYRDSLSPCGVCQIAKHKQSPYPKQSTRELSRPGQLVVIDNMGPVTPPA 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139656.2760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J842_9PHAE5.920e-4438.30Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJN3_9PHAE1.030e-4338.30Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE4.930e-4137.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVF6_9PHAE8.350e-3935.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9Q7_9PHAE3.190e-3736.80gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5JYD3_9PHAE6.270e-3531.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF6_9PHAE6.800e-3235.17Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KMG5_9PHAE2.400e-3135.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL42_9PHAE7.920e-3133.47Peptidase A2 domain-containing protein (Fragment) ... [more]
A0A6H5K9M6_9PHAE1.240e-3034.67gag_pre-integrs domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139656contigH-elongata_contig139656:990..1718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score68.6
Seed ortholog evalue4.7e-09
Seed eggNOG ortholog7425.NV17307-PA
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,3SKEY@50557,41ZUZ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size729
Cds size729
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929830.1928992-CDS-H-elongata_contig139656:989..17181622929830.1928992-CDS-H-elongata_contig139656:989..1718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig139656 990..1718 +
1691679175.0362382-CDS-H-elongata_contig139656:989..17181691679175.0362382-CDS-H-elongata_contig139656:989..1718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig139656 990..1718 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139656.2760.1prot_H-elongata_contig139656.2760.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig139656 990..1718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig139656.2760.1

>prot_H-elongata_contig139656.2760.1 ID=prot_H-elongata_contig139656.2760.1|Name=mRNA_H-elongata_contig139656.2760.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
MGSSSATTASQYSVNNNLATVMVDSEASGHYFDDAIIRNLKHRLQNFVQL
AKPRKIFTAEGALLNGTAEGVLHGLVTNDYGDHIIVRIDILVVPGIGRNL
FSVITAVKKGIVTIFDFENPRLEGFNVTVPLRSESGNLYSFVLDLSADGY
GAKELAMNAVANVQVWHRRLGHLHAQSLDILRKRYGTGITFEGAVSDCDV
CAVGKDQQLAHPKTANHKVNRPFQLCYGDLMGPFTPVAIGGYK
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mRNA from alignment at H-elongata_contig139656:990..1718+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig139656.2760.1 ID=mRNA_H-elongata_contig139656.2760.1|Name=mRNA_H-elongata_contig139656.2760.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=729bp|location=Sequence derived from alignment at H-elongata_contig139656:990..1718+ (Himanthalia elongata Himel1 dioecious)
ATGGGCTCATCGTCGGCCACCACTGCATCTCAGTACAGCGTCAACAATAA CCTCGCCACCGTCATGGTGGACAGCGAAGCGTCAGGACACTACTTCGATG ACGCTATCATCCGTAACCTCAAGCACCGTCTGCAGAACTTCGTGCAGCTC GCTAAGCCCCGCAAGATTTTCACTGCAGAAGGGGCTCTGCTGAACGGTAC GGCGGAAGGCGTGTTGCACGGACTTGTCACCAACGACTACGGCGACCACA TTATCGTTCGGATCGATATCTTGGTGGTGCCCGGAATTGGGCGCAACCTG TTCTCGGTGATAACAGCAGTCAAAAAGGGCATTGTCACCATCTTCGACTT CGAAAATCCCAGACTGGAGGGATTCAACGTCACCGTGCCGCTACGGAGCG AGAGTGGCAACCTCTACTCGTTCGTGCTGGATTTGAGTGCGGACGGGTAT GGCGCGAAGGAGCTAGCAATGAACGCAGTCGCCAATGTCCAGGTGTGGCA CCGACGGTTGGGTCATCTCCATGCGCAGAGCCTGGACATTCTACGCAAGC GATACGGCACTGGCATCACCTTCGAGGGGGCGGTCTCGGACTGCGATGTT TGCGCCGTGGGGAAGGATCAACAGCTGGCTCATCCCAAAACGGCCAATCA CAAGGTCAACCGGCCTTTCCAGCTGTGCTACGGAGACTTGATGGGGCCCT TCACGCCTGTGGCCATAGGCGGCTACAAA
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Coding sequence (CDS) from alignment at H-elongata_contig139656:990..1718+

>mRNA_H-elongata_contig139656.2760.1 ID=mRNA_H-elongata_contig139656.2760.1|Name=mRNA_H-elongata_contig139656.2760.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1458bp|location=Sequence derived from alignment at H-elongata_contig139656:990..1718+ (Himanthalia elongata Himel1 dioecious)
ATGGGCTCATCGTCGGCCACCACTGCATCTCAGTACAGCGTCAACAATAA
CCTCGCCACCGTCATGGTGGACAGCGAAGCGTCAGGACACTACTTCGATG
ACGCTATCATCCGTAACCTCAAGCACCGTCTGCAGAACTTCGTGCAGCTC
GCTAAGCCCCGCAAGATTTTCACTGCAGAAGGGGCTCTGCTGAACGGTAC
GGCGGAAGGCGTGTTGCACGGACTTGTCACCAACGACTACGGCGACCACA
TTATCGTTCGGATCGATATCTTGGTGGTGCCCGGAATTGGGCGCAACCTG
TTCTCGGTGATAACAGCAGTCAAAAAGGGCATTGTCACCATCTTCGACTT
CGAAAATCCCAGACTGGAGGGATTCAACGTCACCGTGCCGCTACGGAGCG
AGAGTGGCAACCTCTACTCGTTCGTGCTGGATTTGAGTGCGGACGGGTAT
GGCGCGAAGGAGCTAGCAATGAACGCAGTCGCCAATGTCCAGGTGTGGCA
CCGACGGTTGGGTCATCTCCATGCGCAGAGCCTGGACATTCTACGCAAGC
GATACGGCACTGGCATCACCTTCGAGGGGGCGGTCTCGGACTGCGATGTT
TGCGCCGTGGGGAAGGATCAACAGCTGGCTCATCCCAAAACGGCCAATCA
CAAGGTCAACCGGCCTTTCCAGCTGTGCTACGGAGACTTGATGGGGCCCT
TCACGCCTGTGGCCATAGGCGGCTACAAAATGGGCTCATCGTCGGCCACC
ACTGCATCTCAGTACAGCGTCAACAATAACCTCGCCACCGTCATGGTGGA
CAGCGAAGCGTCAGGACACTACTTCGATGACGCTATCATCCGTAACCTCA
AGCACCGTCTGCAGAACTTCGTGCAGCTCGCTAAGCCCCGCAAGATTTTC
ACTGCAGAAGGGGCTCTGCTGAACGGTACGGCGGAAGGCGTGTTGCACGG
ACTTGTCACCAACGACTACGGCGACCACATTATCGTTCGGATCGATATCT
TGGTGGTGCCCGGAATTGGGCGCAACCTGTTCTCGGTGATAACAGCAGTC
AAAAAGGGCATTGTCACCATCTTCGACTTCGAAAATCCCAGACTGGAGGG
ATTCAACGTCACCGTGCCGCTACGGAGCGAGAGTGGCAACCTCTACTCGT
TCGTGCTGGATTTGAGTGCGGACGGGTATGGCGCGAAGGAGCTAGCAATG
AACGCAGTCGCCAATGTCCAGGTGTGGCACCGACGGTTGGGTCATCTCCA
TGCGCAGAGCCTGGACATTCTACGCAAGCGATACGGCACTGGCATCACCT
TCGAGGGGGCGGTCTCGGACTGCGATGTTTGCGCCGTGGGGAAGGATCAA
CAGCTGGCTCATCCCAAAACGGCCAATCACAAGGTCAACCGGCCTTTCCA
GCTGTGCTACGGAGACTTGATGGGGCCCTTCACGCCTGTGGCCATAGGCG
GCTACAAA
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