mRNA_H-elongata_contig139224.2733.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: D7FT88_ECTSI (Putative glutamate/ornithine acetyltransferase (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT88_ECTSI) HSP 1 Score: 105 bits (262), Expect = 6.780e-25 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 1
Query: 1 FSLKTWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
F T F +ALLLALGIK++RLGAAAAMSWVLKDALGK GRILWASKMGRRFDSDAKRWRFRS
Sbjct: 206 FVAGTINVFGTQALLLALGIKAKRLGAAAAMSWVLKDALGKFGRILWASKMGRRFDSDAKRWRFRS 271
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A835YQZ5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ5_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.960e-22 Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 1 FSLKTWGTFPR-----------KALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
F+ W F R +ALLLALGIKSR +GAAAA+SWVLKDALGK RILWASKMGRRFDSDAKRWR+RS
Sbjct: 170 FNFTRWRIFQRFVAATVSVLGTQALLLALGIKSRSIGAAAAISWVLKDALGKFVRILWASKMGRRFDSDAKRWRYRS 246
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A0G4FQL3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQL3_VITBC) HSP 1 Score: 97.1 bits (240), Expect = 6.390e-22 Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 13 TWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
T F +ALLLALGIK+RRLG AAA+SWVLKDALGK GR LWASKMGR FD DAKRWRFRS
Sbjct: 305 TANVFGTQALLLALGIKARRLGQAAAVSWVLKDALGKIGRFLWASKMGRSFDVDAKRWRFRS 366
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A0G4G9L5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G9L5_9ALVE) HSP 1 Score: 95.1 bits (235), Expect = 3.030e-21 Identity = 48/66 (72.73%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 1 FSLKTWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
F T F +ALLLALGIKSR LGAAAA+SWV KDA GK GRILWAS+MGR FD DAK+WRFRS
Sbjct: 381 FLSATVNVFGTQALLLALGIKSRNLGAAAALSWVFKDAFGKGGRILWASRMGRAFDGDAKKWRFRS 446
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: W7TAG4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAG4_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.360e-19 Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 13 TWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
T F +ALLLALG+K+ R+G A +W+ KDA GK GRI+WASKMGRRFDSDAKRWRFRS
Sbjct: 273 TVSVFGTRALLLALGLKTERVGLTATFNWIQKDAFGKFGRIMWASKMGRRFDSDAKRWRFRS 334
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: M2Y329_GALSU (Glutamate N-acetyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y329_GALSU) HSP 1 Score: 87.8 bits (216), Expect = 1.130e-18 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 13 TWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
T G F +ALLLALGIK+ R+G AAA SWVLKD LG+ G+++WAS+MGR FD+D KRWRFRS
Sbjct: 447 TVGVFGTQALLLALGIKAGRIGRAAATSWVLKDGLGRLGKMVWASQMGRDFDADPKRWRFRS 508
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A7S2WMF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMF6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.470e-18 Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 1 FSLKTWGTFPRKALLLALGIKSR-RLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
F T F +A+LLALGIK++ LGAAAA SWVLKDALGK GRI+WA +MGR+FDS+AKRWRFRS
Sbjct: 147 FVSATINVFGVQAMLLALGIKTQGALGAAAATSWVLKDALGKFGRIMWAGRMGRQFDSNAKRWRFRS 213
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A1X6NWJ7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWJ7_PORUM) HSP 1 Score: 87.0 bits (214), Expect = 2.020e-18 Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 13 TWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
T G F +ALLLALGIKS RLG AAA+SWVLKD LG+ G++LWA +GR FD D KRWRFRS
Sbjct: 138 TVGVFGTQALLLALGIKSGRLGQAAAISWVLKDGLGRVGKMLWAGSVGRDFDVDPKRWRFRS 199
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A7S2BSH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSH1_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.460e-17 Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 25 FPRKALLLALGIKSR-RLGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
F +A+LLALGI+++ LG AAA+SWVLKDALGK RI WAS+M RRFDSDAKRWRFRS
Sbjct: 187 FGTQAMLLALGIRTQGALGTAAAVSWVLKDALGKLCRIFWASRMSRRFDSDAKRWRFRS 245
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Match: A0A7S1ZFK0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFK0_TRICV) HSP 1 Score: 83.2 bits (204), Expect = 3.960e-17 Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 1
Query: 25 FPRKALLLALGIKSRR-LGAAAAMSWVLKDALGKCGRILWASKMGRRFDSDAKRWRFRS 198
F ++LLL LGIK+R LG +AA++WVLKDALGK R++WAS+MGR+FDSDAKRWRFRS
Sbjct: 153 FGTQSLLLGLGIKNRNTLGLSAALNWVLKDALGKMVRMVWASRMGRKFDSDAKRWRFRS 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139224.2733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig139224.2733.1 >prot_H-elongata_contig139224.2733.1 ID=prot_H-elongata_contig139224.2733.1|Name=mRNA_H-elongata_contig139224.2733.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp FSLKTWGTFPRKALLLALGIKSRRLGAAAAMSWVLKDALGKCGRILWASKback to top mRNA from alignment at H-elongata_contig139224:1052..1255- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig139224.2733.1 ID=mRNA_H-elongata_contig139224.2733.1|Name=mRNA_H-elongata_contig139224.2733.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=204bp|location=Sequence derived from alignment at H-elongata_contig139224:1052..1255- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig139224:1052..1255- >mRNA_H-elongata_contig139224.2733.1 ID=mRNA_H-elongata_contig139224.2733.1|Name=mRNA_H-elongata_contig139224.2733.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at H-elongata_contig139224:1052..1255- (Himanthalia elongata Himel1 dioecious)back to top |