mRNA_H-elongata_contig1391.2720.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1391.2720.1
Unique NamemRNA_H-elongata_contig1391.2720.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A6H5KTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC1_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 9.530e-82
Identity = 135/174 (77.59%), Postives = 154/174 (88.51%), Query Frame = 3 
Query:    3 ELGLDESWETEPVADGTALRESGLTTILEAALANARSRERDGAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASAGRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERRCTQGMTESACPQTLGVARVALRQR*TPRIQMG 524
            +LGLD++W+ EPV+ GT LRESGLTTILEAALA+ARSRERDGAVIFVGMDTPELPW EV++A+ SAEKDGKAYICPASDGGYTLLGLP  AGRGTFEGVKWSD+LTCKSQT AL +RGV TR GGTYHDVDEADDVAGLE+R  +G+  S CPQTLG+AR ALR++  PR+ +G
Sbjct:   90 DLGLDKAWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICPASDGGYTLLGLPPKAGRGTFEGVKWSDSLTCKSQTLALASRGVSTRTGGTYHDVDEADDVAGLEKRSPRGLEGSPCPQTLGIARTALRRQLLPRVWVG 263
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A835Z1N4_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 7.110e-32
Identity = 73/165 (44.24%), Postives = 94/165 (56.97%), Query Frame = 3 
Query:    3 ELGLDESWETEPVADGTALRESGLTTILEAALANARSRERDGAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASAGRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERRCTQGMTES-ACPQTLGVARVALR 494
            E G++  W   PVA GT L+++ LT IL+ AL   R     G V+FVGMDTP LP  E++ A     +D  A +CPA+DGGYTLLG+P +A    F+GV WS   TC++Q   L   G+   IG TY D+D A+DV    R  T     +  CP TL  A  ALR
Sbjct:   76 EAGVEHEWVLTPVAGGTKLKDADLTAILKDALEGTREEGTTGTVVFVGMDTPHLPSFEIIEACRKGAED-VALVCPANDGGYTLLGVPRNAPAKIFDGVLWSSPKTCETQVTRLRECGISVMIGATYEDLDTAEDVHSWHRTATATSAAAHICPLTLEAAAAALR 239
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: D8LGD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD1_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 4.440e-31
Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 3 
Query:    3 ELGLDESWETEPVADGTALRESGLTTILEAALANARSRERDGAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPAS 236
            +LGLD++W+ EPV+ GT LRESGLTTILEAALA+ARSRERDGAVIFVGMDTPELPW EV++A+ SAEKDGKAYICP +
Sbjct:   90 DLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICPVA 167
[Close]
BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A7S2CAW3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAW3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.420e-21
Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 3 
Query:    3 ELGLDES-WETEPVADGTALRESGLTTILEAALANARSRERD--------------GAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASAGRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERR-------CTQGMTESACP 461
            +LGLD + W   P+  G  LR S L   L   L +AR+                  GA +F+GMD PE+  +++  A  +A   G AYICPA+DGGYTLL LP  A    F GV+WS   TC SQ   + ++G+   +G TY D+D+  D+ GL +R       C  G    + P
Sbjct:  125 DLGLDAATWVLIPIQQGDDLRSSDLGGKLAFGLKDARAVPSASFGGDGKMVAGLSRGAALFIGMDAPEVSPLQIAQALATARSRGSAYICPATDGGYTLLALPPGAPDTVFSGVRWSADDTCLSQMSQIASKGIPVLVGPTYDDIDDIHDLRGLSQRLRRQQLSCVPGELNESAP 299
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: K0S136_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S136_THAOC)

HSP 1 Score: 103 bits (257), Expect = 2.140e-20
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 3 
Query:   21 SWETEPV-ADGTALRESGLTTILEAALANARSRERDGAVIFVGMDTPELPWVEVLSAKYSAEKDG--KAYICPASDGGYTLLGLPASAGRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERRCTQGMTESA 455
            +W   P+ +D + L  S L   L  +L  AR  +    V+F+GMD+PE+P  E++    +A      +AY+CPA+DGGY LL LP+ A    F G++WS ALT  SQ  AL   G+   IG   +D+DE +DV+ L +R +   +E A
Sbjct:   99 NWVLMPMLSDSSDLTSSSLGDKLMDSLTRARELDEGSPVLFLGMDSPEVPTDEIVRGLETASSKDMPRAYMCPANDGGYGLLALPSCAPTSVFSGIRWSCALTAVSQLKALSDSGIDVSIGRLMYDIDEPEDVSSLAKRLSSPFSEEA 246
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A7S3X3J9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X3J9_9SPIT)

HSP 1 Score: 97.1 bits (240), Expect = 2.300e-18
Identity = 61/153 (39.87%), Postives = 81/153 (52.94%), Query Frame = 3 
Query:    6 LGLDESWETEPVADGTALRESGLTTILEAALANARSRERDGA---VIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASA-GRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERRCTQGMTES 452
            LG+ ++W   PV +     E   ++ L A L +A  R    +   +IF+GMD+P LP  E+  A         AYICPA DGGY LLGLPA A     F  V WS + TC+SQ  AL   G    IG TY DVDEA+D+  + ++  +   ES
Sbjct:   94 LGVAKAWTLLPVLETP---EGSSSSDLGAILMDAAKRCPSASAPNLIFIGMDSPTLPSKELTKAAQVCSTSSHAYICPAVDGGYVLLGLPADAKAEVAFADVSWSASDTCESQVDALARAGCKCEIGPTYADVDEAEDLRTIGQQLLRESVES 243
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: R1D0W7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D0W7_EMIHU)

HSP 1 Score: 96.7 bits (239), Expect = 5.510e-18
Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = 3 
Query:   12 LDESWETEPVADGTALRESGLTTILEAALANARSRERDGAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASAG-RGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERRCT-QGMTESACPQT 467
            +++ W  +PV   ++   S L  IL  A   AR+      V F+G+D P+LP   +L+A  ++   G A +CPASDGGYTLL LP  A  R  F  V+WS   TC SQ  AL   G+ + +  T+ DVDE  D+  L  R   +  + S CP T
Sbjct:  124 VEDRWRLQPVLSSSSAASSSLGDILCDAGQRARAARGCARVSFLGVDCPDLPLEALLAAASASSAPGVAAVCPASDGGYTLLALPEGADERLCFSDVRWSAGDTCLSQLQALTRAGLTSAVLETHSDVDELPDLRALWARLAGEPDSTSQCPHT 277
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BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A6S9DJ27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DJ27_HETAK)

HSP 1 Score: 94.7 bits (234), Expect = 1.420e-17
Identity = 54/137 (39.42%), Postives = 71/137 (51.82%), Query Frame = 3 
Query:   12 LDESWETEPVADGTALRESGLTTILEAALANARSRERDGAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASA-GRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGL 419
            + E W   P+     L+   L   L  A          GA  FVGMDTP+LP   V  A  +  + G+A++CPA+DGGY LLGLPA A     F GV+WS   TC+ Q  A+ A  +    G  Y DVD+A+D+  L
Sbjct:   78 ITEQWVLLPMIQSNELQSPDLGDKLVHAHNTCTQWFGPGATAFVGMDTPQLPAAAVARA-LTEGRGGRAFVCPATDGGYVLLGLPAGAPAEACFRGVRWSADTTCEDQVRAINAASIEVVTGDIYTDVDDAEDMEAL 213
[Close]
BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A1Z5K6U4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6U4_FISSO)

HSP 1 Score: 97.1 bits (240), Expect = 1.960e-17
Identity = 60/129 (46.51%), Postives = 74/129 (57.36%), Query Frame = 3 
Query:   57 LRESGLTTILEAALANARSRER----DGAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASA-GRGTFEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERR 428
            L+ S L+ ILE AL   R R R    DG VIFVGMDTP++P  E+    Y+ E   +A +CP++DGGY LL +P  A     F GV+WSD LT  SQ  AL    V   +G   +DVDE DDV  L  R
Sbjct:  150 LKSSYLSDILENALHRVRLRLRKLKSDGPVIFVGMDTPDIPLDELA---YALEDYKRARVCPSADGGYGLLSVPHHAPAERIFAGVRWSDPLTLASQLKALTDEDVRVTVGRVMYDVDEPDDVVQLVER 275
[Close]
BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Match: A0A8J9TKA0_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TKA0_PHATR)

HSP 1 Score: 90.5 bits (223), Expect = 1.180e-16
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 3 
Query:  126 GAVIFVGMDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASAGRGT-FEGVKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGL 419
            G VIF+GMD PELP  E++SA    E    A +CP+ DGGY +L +PA+A   + F+G++WSD LT  +Q   L   GV  RIG   HD+DE DDV  L
Sbjct:   82 GPVIFLGMDAPELPLGELVSA---FEHPDTALLCPSDDGGYGMLSVPATADADSIFDGIRWSDPLTAVAQLKNLTDGGVPVRIGQLMHDMDEPDDVLNL 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1391.2720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KTC1_9PHAE9.530e-8277.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1N4_9STRA7.110e-3244.24Nucleotide-diphospho-sugar transferase n=1 Tax=Tri... [more]
D8LGD1_ECTSI4.440e-3179.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CAW3_9STRA2.420e-2136.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K0S136_THAOC2.140e-2038.51Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3X3J9_9SPIT2.300e-1839.87Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
R1D0W7_EMIHU5.510e-1838.31Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A6S9DJ27_HETAK1.420e-1739.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5K6U4_FISSO1.960e-1746.51Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A8J9TKA0_PHATR1.180e-1648.48Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1391contigH-elongata_contig1391:11165..16236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score86.7
Seed ortholog evalue8.2e-15
Seed eggNOG ortholog159749.K0S136
EggNOG free text desc.Uncharacterized protein conserved in bacteria (DUF2064)
EggNOG OGs2S8J2@2759,2XGI3@2836,COG3222@1
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-06_002550.1
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size3917
Cds size357
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1391.2720.1prot_H-elongata_contig1391.2720.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1391 14579..15538 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929825.121549-UTR-H-elongata_contig1391:11164..145781622929825.121549-UTR-H-elongata_contig1391:11164..14578Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1391 11165..14578 -
1691679173.715242-UTR-H-elongata_contig1391:11164..145781691679173.715242-UTR-H-elongata_contig1391:11164..14578Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1391 11165..14578 -
1622929825.1864805-UTR-H-elongata_contig1391:15538..155631622929825.1864805-UTR-H-elongata_contig1391:15538..15563Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1391 15539..15563 -
1691679173.7538283-UTR-H-elongata_contig1391:15538..155631691679173.7538283-UTR-H-elongata_contig1391:15538..15563Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1391 15539..15563 -
1622929825.2012055-UTR-H-elongata_contig1391:16115..162361622929825.2012055-UTR-H-elongata_contig1391:16115..16236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1391 16116..16236 -
1691679173.7612977-UTR-H-elongata_contig1391:16115..162361691679173.7612977-UTR-H-elongata_contig1391:16115..16236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1391 16116..16236 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929825.1361592-CDS-H-elongata_contig1391:14578..146321622929825.1361592-CDS-H-elongata_contig1391:14578..14632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1391 14579..14632 -
1691679173.7268393-CDS-H-elongata_contig1391:14578..146321691679173.7268393-CDS-H-elongata_contig1391:14578..14632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1391 14579..14632 -
1622929825.1501899-CDS-H-elongata_contig1391:14917..151351622929825.1501899-CDS-H-elongata_contig1391:14917..15135Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1391 14918..15135 -
1691679173.7351723-CDS-H-elongata_contig1391:14917..151351691679173.7351723-CDS-H-elongata_contig1391:14917..15135Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1391 14918..15135 -
1622929825.1642528-CDS-H-elongata_contig1391:15453..155381622929825.1642528-CDS-H-elongata_contig1391:15453..15538Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1391 15454..15538 -
1691679173.7463102-CDS-H-elongata_contig1391:15453..155381691679173.7463102-CDS-H-elongata_contig1391:15453..15538Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1391 15454..15538 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1391.2720.1

>prot_H-elongata_contig1391.2720.1 ID=prot_H-elongata_contig1391.2720.1|Name=mRNA_H-elongata_contig1391.2720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MDTPELPWVEVLSAKYSAEKDGKAYICPASDGGYTLLGLPASAGRGTFEG
VKWSDALTCKSQTGALEARGVMTRIGGTYHDVDEADDVAGLERRCTQGMT
ESACPQTLGVARVALRQR*
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mRNA from alignment at H-elongata_contig1391:11165..16236-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1391.2720.1 ID=mRNA_H-elongata_contig1391.2720.1|Name=mRNA_H-elongata_contig1391.2720.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5072bp|location=Sequence derived from alignment at H-elongata_contig1391:11165..16236- (Himanthalia elongata Himel1 dioecious)
AGGAGCTAGGCTTGGACGAGTCGTGGGAAACGGAGCCGGTTGCGGACGGT
ACGGCTCTTCGAGAGAGTGGGCTCACAACAATCCTCGAGGCGGCGTTGGC
GAATGCGAGATCTAGGGAAAGGTGACTTAAATAACATCCTGCTGTCGGGA
ATGACGCCACCCGCACCCCGCCATCCGCTCCTGTTGAGAGCGTTCCAGTT
TTGTTTCCTTGACGTTATCAAAGTGATGTGACGAATCTGAACATTTGTAC
GGTTGGATACATTTTCGACACCAATCGTTGTTTTCGCTTCACCAACGAAC
GCGCTGCCATACCTGCACGGTCGGTGCTACCCTCGATGGTACGGACCCTA
CTCGCCTCGATAACGCCCCGCATACCAGGCTATTATTTTCCTCTAGACAA
ACCCAAGTCTGCTAGCGGCTTGACACCAGTGTTTCCAATCGTGAATACGG
TCGTACCGTAACTGTTTGAAGAAATACTTATTTGTCAATGGCACCCTTTC
TACGAGCGGGGGAGCGAAACGGTTTTGCCTCCAGTGTTTTTTCTCCTGTC
ATGTGCTCCCCGTCACCCCCGCCCTCCATCCCCTTTCCCTCTCATCTTCC
CGAACTCCCTTCTATATCGAACTCCTTAACCCCCGGGGCAACCATCGGTT
TTGGCATCGCTGGCGTGTGGCAGAGACGGGGCTGTGATCTTTGTCGGGAT
GGATACCCCCGAGTTGCCGTGGGTTGAGGTTCTTTCTGCGAAGTATTCCG
CCGAGAAGGATGGCAAAGCGTACATCTGTCCAGGTATGATCGCGACGGTG
TGTCTACCGTACGTTTCCCTTGATGAGGGGAGGGATGGTTTGTGTGTTTG
ATGATAATTGTTTTTTTGGGGGGGAGCTTGTGGTGGGGAGGAAGTACACG
GGGTTTTCTCCTTGTGCAGTTATGATAGTATTTGTTGTCGGTATTTCTTC
GAGGTATATGTGTTATGCTTGTGGGACGGACCAAGGCTAGGAGAGGCTAG
GGGAGTATCAACAGACCAGCTGTTTCAGACTCAAGACTCTTTATTCCCAC
CCTCCTTTAACCCAACGGCTTCCTTCTCCGCTGCTTATATCCTACCGGCA
GCTTCCGATGGGGGCTACACACTTCTCGGATTGCCCGCCTCGGCAGGACG
CGGCACCTTCGAAGGCGTTAAGTGGTCGGACGCACTGACATGCAAAAGCC
AGACGGGCGCCCTGGAGGCCCGGGGTGTGATGACGAGGATCGGCGGCACT
TACCATGACGTAGACGAGGCGGATGACGTTGCAGGACTGGAGAGACGGTG
CACACAAGGCATGACAGAGGTCAGCAGGAACGGTCCAGATCGGACGGGGC
TCCGTAGATTCGTGTTGTGGCTAGGTGCTGACTATTATAGTGTTCAGGTG
GTGTCGGACGGCCTTTTCACACTGAGTCGCCTCGCTCGAAGGCCGCGTTG
GGGACAAAATGCGTTGGTCTGTTGTCAAGTCTCAGGAGGGTGATACGTTT
TCCGCATTCCTCAAACCTATTTCCCACGTTGCGTGTGAAATCTAATAACC
CATTATTTGTTCTCCTTCCGCGCTGCCGTGTTTTGTGTCATTACGGATGT
ACAGTCGGCTTGTCCGCAGACGTTAGGCGTGGCGAGGGTTGCTCTTCGCC
AAAGGTAGACTCCGAGAATACAGATGGGCTGCTTGCATTTCTTTGAGCAT
ACATATGACCTTGAAAGTGGAATATGGAGTTTGGCGTGTAGTGGGCTGGG
GAGGTTGGGGGTAAACGACAGGTGCAGAGTTAGTTCGGAGTGTGTGGGAG
CGAGCGAGGTAACGCAAGCGAATCGCGGGGGTATCTGGTCATTCGCTTAG
TTCATGATCGAGGGTGTTTGCCGCGAATTGCTGTTTTACCGCATGTTCAT
CCACCGTACCAAATCATTGAAGGACTGCTTGGATGTGTATTGGTGGACGA
AAACCATTTGCCCTGCGCGCTTGCACAAACCAAGACCCTGACGAGTAGGA
AGATATATGGCTCTGTGGTTTTCGTCTTCCCCCAACCCCTCCCTATTCGT
AGCTATCCTTTCTAAAACGAGCACAATGTAAAGCGTGATATAGAGCTCTA
ATATGGTGAGATGATGAGGTCCCTGAGGTTGTGGGTCGTTGGAGCAAGAG
GGGCACGTCGGTGGGTGGAAGGGTGGGTTGGAGAAATCATCATCCAAGTA
TTGTAATGCCTTTCTTTTCATTGAGTATGGTTGAGGTGATGTGTGACAAA
CTGAGGTAACTCCCGCTTTTATGCAACCTCACGTAGGCTGGGTTGCGTCA
AGGGGTTTCACCTTCTCGGTGGCGCTTGATCTTTCTGATACGTCGACTTT
TGCCTATGGGCACGGCAGCCGGCGAGAGTGGGTGCGGTTTTCGTTTTGGT
ATTTTTTTGTTCGTGTAGAGAGGTGGCACGCCGCGTTCATGGTTTCACAG
CGGCCACGGGTTTTGATCTATATCTTTCTCAGCCACCGCAGCCGACTGGT
GTTCTTCCCGCCAAGACTGAAATTGTATGAAGTACCCGTATGTCTTATTG
TCCCGATAGAGTAGGAATGAAGGATGGATGCGTGCGTGCTCATCTGGTGG
TTTTGACTGTACTTCTGGTTGTGGAAATGTAAGGTCTTTTCTTTATTTAA
GCCTCTGACATTCTGTAATTTATTTGTAGTTGGATGGAATCGTGCGAGTC
GCGATTTCTTTTCCCCGTAACGCTTCTCTGGCCGTTCTGTTTCAATCGGA
GTCTTGTCCTTGTTATTCGTCTTGGGGGATCGGGTCTTGTCATACGTCCG
CGCGCGAGGAATGGCGACCATGTAGACTGTGCTTGTAGCGTTTGGTAGGC
GGGCTATGGAGTAGGTGGGGTTGTGTCGTTGACCTATATCATCCCGTGAT
GGTGATTGGTATATACTCTTGAGGACAAAATATGACAAGTAGGTTTAGCT
GGAATGCAACAGCCGATCGGACCGGGGTTCACATGTGCTAGTGATTCTAT
TTGTAATTTTTTCATGGGTTATCATCTGTTTCATCTGTTTCCAGACTCTC
GTGGTATATCGTACACCCGCCCTTCGGCGGCGTGCGCCTCCACGGTTGAC
GCACGTTCCACACGCGGTGACTCTAGCTCCACCCATGTTGGCAAGTTGGG
GGAATCTTTCACTACACAGTCAAGTTCTTAGTAAATCAGCCACTGACGTA
CTCGACGCCGTCTTATGATTTATCTCACGCCTTCCTTTTGATATTGTGTG
TCGATTTTTATCTTAGCATTTGACGGCTTATGTTTTCCAGGTGCTGTGTG
GCGTTGCGTTTTGTTGACGGGTAATTAAGTATGTAAGTTGTTGTCGAGGT
TCTTTTGGGAGGTGGGGGGAAAAGGCAGGGGCAGCAGCAAAAACATTACA
CCTTCGAGTGGTAAATGTTTCCTGTGCGTCTTGGATAGCATACTCGTACT
ATGGCCGACATAATATGTTACAATCAGAGTTAGCGGAGTCTTCAAGATGT
CGCTGCCTTCGTGTAGCGCCATTCCCATTTGCGTGCAGTCCTGAATAGAG
CTGGTGGTGGTGATGGTGGTGATAGTGGCAGGCCTTCAAAATCGGGCACG
GTTTATTTATTTCTTCTTTCTTAGTTTTTTTCAGTCAAACTGCTGTAGTA
TGTTAACTAACGCAAATACCTTGCGTTCTCTTTCTCCTTCATGAGCGCGT
TTCGAAACCCGATGCTTCTCGCGCATTGATCCACGTCTGTTGACACTTTG
ATTGCGCTCGGTCCGTTGTATTATTCCCGAAGACTCATTTCAATCTTCCT
CGTTTTTGAGGGACGAGTACTTGCTCGTCAAAGTTCCGAGGCGTACATGC
TTTTATGACGAGTTCGCTACTGAAGAAAAAAAAAGAAGTTGCTGCATTAT
TGTATCGTGTTTGGTGCGGGAATTGGGCACATCTTAAGAGATAAGCCTGT
TTACTGTAAGTACTTACAGTGCGAGAGCTGCTGAGGAAAGTGTGCGGCCA
ATATGGAGACGAATGGTGAAAAAGTCGGGCGAAGTCGCTTTTCCCTGTGA
TGATTATAATGTTCACTCGTCGGTCATGGAGGGGGGACGCGCTGACCGAT
GCTATACCCCCTTTTAGATTATAGCGTGCTATTTTTTTTTAGTTTTGGCT
TGCATGCATTGATGCGTCGGTGCAGATAATTGCGGCATTGTCCTTGTTTT
ATTGTAATTGCGCGCGAGAAGGCGGATTCAGTAGTATAGCAGAGTTTGGG
CGTGTGAGCGAATGTGCTTAGCTGTTTGCCCACGTATCGCCGCCCCATCG
TAACGCGCCTCATATTGCTTTGGAAAATTATTATTTGAGAACTTTGTACG
AGGGAGGGAAGAATTCACTGCTACAAATATTACGATGATGATGCGTTCCA
GATCGCTGCTCTTGTGCCATTATCGGTGGTAGAAAATATGTCGCTGTCTC
TGTTCCAATTTATATGTATATCCATGTATAATCTTTTTCGCGCCGTGCTT
GGAATTATTCTAAGGAAGCGAGTCCGAGAAACGAATGAACATGAGTGTAA
TTGGGGACTGCGAGCCAGGCTTTGTGAACACAGCGTACATGTGAAAAAAG
AGGAACGATATATTGTCATTCAAGTGAATCGTGTTGTGTGTTGATCAGCA
GATAGATAACGATAGGGCTGTTTTTTCGAGTTGCTTTACTTCGCTGCCGG
CTGATCGAGATCTTCAAGTTTGCATATTTGTGAACATTTTGGGGTGAGGG
TACAAGGAGAGGTTTGCTGCGTTTAAATAACGACGGCAAACTTAAGGATG
AATCAATAGCTCCATAATAACATGCGGTTTATACGAGGTGATACTCTATT
GCTTGGATACTGATAACTTTCGCATAAATAAGACAGCAGGCAGCGGGTAT
TTCCATTGACTTTTATTTTGATTTCCTCAAACGATTATGTTGTACTCTCT
CTAAAGCTCAAGGCTTGTTAGAGCCTGAAGCTACAAGAAGCATGAGGATA
GGGAGAGTGACGGCCTTACTTCCTTGGATGACATGCGAGGGCGGGACAAG
GCGGGTCAAGGCGTAAAACCCA
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Coding sequence (CDS) from alignment at H-elongata_contig1391:11165..16236-

>mRNA_H-elongata_contig1391.2720.1 ID=mRNA_H-elongata_contig1391.2720.1|Name=mRNA_H-elongata_contig1391.2720.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at H-elongata_contig1391:11165..16236- (Himanthalia elongata Himel1 dioecious)
ATGGATACCCCCGAGTTGCCGTGGGTTGAGGTTCTTTCTGCGAAGTATTC
CGCCGAGAAGGATGGCAAAGCGTACATCTGTCCAGATGGATACCCCCGAG
TTGCCGTGGGTTGAGGTTCTTTCTGCGAAGTATTCCGCCGAGAAGGATGG
CAAAGCGTACATCTGTCCAGCTTCCGATGGGGGCTACACACTTCTCGGAT
TGCCCGCCTCGGCAGGACGCGGCACCTTCGAAGGCGTTAAGTGGTCGGAC
GCACTGACATGCAAAAGCCAGACGGGCGCCCTGGAGGCCCGGGGTGTGAT
GACGAGGATCGGCGGCACTTACCATGACGTAGACGAGGCGGATGACGTTG
CAGGACTGGAGAGACGGTGCACACAAGGCATGACAGAGCTTCCGATGGGG
GCTACACACTTCTCGGATTGCCCGCCTCGGCAGGACGCGGCACCTTCGAA
GGCGTTAAGTGGTCGGACGCACTGACATGCAAAAGCCAGACGGGCGCCCT
GGAGGCCCGGGGTGTGATGACGAGGATCGGCGGCACTTACCATGACGTAG
ACGAGGCGGATGACGTTGCAGGACTGGAGAGACGGTGCACACAAGGCATG
ACAGAGTCGGCTTGTCCGCAGACGTTAGGCGTGGCGAGGGTTGCTCTTCG
CCAAAGGTAGTCGGCTTGTCCGCAGACGTTAGGCGTGGCGAGGGTTGCTC
TTCGCCAAAGGTAG
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