mRNA_H-elongata_contig13860.2697.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13860.2697.1
Unique NamemRNA_H-elongata_contig13860.2697.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A6H5K0Z4_9PHAE (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z4_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 1.470e-138
Identity = 216/327 (66.06%), Postives = 243/327 (74.31%), Query Frame = 1
Query:   52 MGDLEDKILKKNIPGKYTWWEKDSDEEGEGARADWLDGEASDPEAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLGGVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHFGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKS-YDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVFE 1029
            MGDLEDKILKKNIPGKYTWWEKDSDEEGE ARADW+D EASDPE E+TE++KQ+KWV++DCPEPIRRTI+ARQEKERARTGVKGVLAD+  W+ S +AE L+A+EYRAAMLKRM EGH VPG   A  +                    E FLGSYRRRRLEQLKA+AGRP FGQI EA+R++FVS VDTEDPRT VVVHLYEPYI AC RMNRFLEV                                       LA+KQPTVKFLR+RSSAA+   YDP+ALPTLLLYR+GEVVGC+TRVT+D+GE+FTQDDVEWLLQEHDVFE
Sbjct:    1 MGDLEDKILKKNIPGKYTWWEKDSDEEGETARADWVDREASDPEREMTEMEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMAEGHTVPGPLAATTIXXXXXXXXXXXXXXXXXXXXEGFLGSYRRRRLEQLKATAGRPQFGQIVEAERSTFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEV---------------------------------------LAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGENFTQDDVEWLLQEHDVFE 288          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A835YKQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ5_9STRA)

HSP 1 Score: 316 bits (810), Expect = 5.230e-104
Identity = 175/330 (53.03%), Postives = 221/330 (66.97%), Query Frame = 1
Query:   52 MGDLEDKILKKNIPGKYTWWEKDSDEEGEGARADWLDGEASDPEAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLGGVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHFGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAA----DKSYDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVFE 1029
            M  LED+ILK+NIPGKY+WWEKD+DE G  ARA+W D +ASDPE ELTEL+KQ+KWVE+DCP+P+RRTI+AR EKERARTGVKGVLAD+  ++ S+ A+  L ++YRAA L+RM  GHVV  SAP    ++    +D D DE   D    +FL  YR++RL +L+ASA RP FGQI+EA R  FV +VD  DPR +VVVHLYEPYI AC  MNR LEV                                       LA + P+VKFLRM S       ++ YDP+ALPTL++YR+ E+V C TRVT+DLG++FT+ DVEWLLQE ++FE
Sbjct:    1 MSTLEDQILKQNIPGKYSWWEKDTDEAGPKARAEWFDPDASDPEQELTELEKQKKWVEADCPDPVRRTIMARAEKERARTGVKGVLADHAAYQASEMADHQLQQQYRAAALQRMAGGHVVANSAPHFVPKTDPDAEDGDDDE---DGDLNDFLSEYRKQRLLELQASAHRPIFGQIQEASRGDFVEQVDNVDPRCYVVVHLYEPYIKACQAMNRHLEV---------------------------------------LAREYPSVKFLRMLSGDVSGGDEEGYDPVALPTLMVYRAKEIVACFTRVTDDLGDTFTKSDVEWLLQEINIFE 288          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A7R9UGG9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG9_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.670e-56
Identity = 125/329 (37.99%), Postives = 174/329 (52.89%), Query Frame = 1
Query:   61 LEDKILKKNIPGKYTWWEKDSDEEGEGARADWLDGEASDPEAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHV--VPGSAPARPVESLGGVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHFGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKS----YDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVFE 1029
            LEDK+LKKNIPGKY+WW+ + D  G         GE  DP+ E  +    Q+ ++ D PEP+RR  ++++ +E+  TGVKGVL D+ +WR  ++A+       R A L+R   G +    G A A        V++ D D       D+EFL  YRR+R+ QL A+A  P FG++ E     FV  VD  DPR FVVVHLYEP++  C +MNR LE+                                       LA +QP+VKFLRMR+    ++    +D IALPTLL+YR G+ V  + RV +++GE    +DVEWLL    VF+
Sbjct:    3 LEDKMLKKNIPGKYSWWDDEDDHRGXXXX-----GEVQDPDEEGKDDLDVQRALQ-DAPEPVRRACMSQRVREKDNTGVKGVLRDFEEWRDEEDAKETSDAMRRNAALQRAARGAIRAADGGAHAN-------VENADID------SDDEFLERYRRQRMSQLMAAAAAPTFGEVAEVSGDDFVETVDAVDPRAFVVVHLYEPFVHLCTKMNRVLEI---------------------------------------LARRQPSVKFLRMRADECRRTTGQEFDAIALPTLLVYRGGQTVATIVRVQDEVGEGLQANDVEWLLGLEGVFQ 273          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A7S2B798_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B798_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.670e-45
Identity = 111/339 (32.74%), Postives = 171/339 (50.44%), Query Frame = 1
Query:   61 LEDKILKKNIPGKYTWWEKDSDEE--GEGARADWLD--------GEASDPEAELTELQKQ----QKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLGGVDDEDRDEAEE-DAGDEE-FLGSYRRRRLEQLKASAGRPHFGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVFE 1029
            LEDK+L+ NIPG+YT W+KD DEE  G+  RA+W+D        G A  P  E   +++     Q+ + +  PE + +T  A Q    A+TG KGVL DY + +R +     + + +R A+L RM  G     +           V  ++R+  EE DA +EE FL  +R  R+ +L++++ +P FG I E     +   +D  DPR FVVVH+YE Y+  CGRMNR  E                                        LA     VKF+R++S+ +   +DP+ LPT+ +Y++G++     RV + +G +F+ DD+EW+L +  VFE
Sbjct:   14 LEDKMLRTNIPGRYTQWDKDDDEEEGGKNYRAEWIDPGEGADEAGAAGQPMNESQRMERDVADLQRKIAAGMPETVAKTSYAHQMG--AKTGPKGVLNDYKEHKRIEAHNKQVDKLHREAVLNRMAYGATASNTLSLAQERIDAQVAQQEREAEEEADAAEEEDFLSKFREARIRELQSASTQPVFGNIVEVAAHEYCEAIDKCDPRVFVVVHIYEDYVKECGRMNRCFEE---------------------------------------LARSYTNVKFVRLKSTESPSPFDPVTLPTICVYKAGDLCNSFVRVQDTVGTNFSSDDIEWMLNQEGVFE 311          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A7S2RCN5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCN5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.050e-36
Identity = 111/333 (33.33%), Postives = 157/333 (47.15%), Query Frame = 1
Query:   61 LEDKILKKNIPGKYTWWEKDSDEEGEGARA------DWLDGEASDP----EAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLGGVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHFGQIREADRAS-FVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVF 1026
            LEDKILK+NIPG+Y+ W  D+DE G   RA      D ++ E  D       E+ ++ K Q++ E   PE + +   AR    R  TG KGVL DY + +  ++ E L A   R A+L+R+  G      A     E                  +++ L   R +R  +L+A+A  P FG++RE      F+  +D ED R FVVVH+Y+  + AC  MNR  E                                        LA     VKFLR++++AA  ++D   +P L +YRSG++  C  RVT+ +GE FT DDVE LL EH VF
Sbjct:   29 LEDKILKRNIPGRYSTW--DADEAGTERRAAAREEEDTVEREEEDAGDGATQEMRDVGKMQEYAEHGVPETLSKNEYARAHGHR--TGPKGVLTDYREHQVHEHVERLAADAEREAVLRRIAYG------ASREDAEXXXXXXXXXXXXXXXXXAEQDILRRLREQRRRELQAAASMPVFGEVREVTADDHFLEAIDKEDSRVFVVVHIYDEAVPACRSMNRCFER---------------------------------------LARSHSHVKFLRLQAAAAPTTFDADVMPVLSIYRSGDMHACCVRVTDQVGERFTTDDVENLLSEHGVF 312          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A7S3GW90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW90_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.780e-36
Identity = 110/334 (32.93%), Postives = 168/334 (50.30%), Query Frame = 1
Query:   52 MGDLEDKILKKNIPGKYTWWE---KDSDEEGEGARADWLDGEASDP-EAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLG-GVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLK----ASAGRPH------FGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLL 1008
            MGDLE+ I ++N+PGKY+ W+   ++   +    + D +  E   P ++++  LQ  Q+   ++ PE IR++I+A + +  A TGVKGVLADY   +    AEA     +R  +L RMT+G  V   A     E+ G  ++D D D       D  F+  +R +RL++L+    +SAG  +      FG ++E     FV EV+ E     VVVHLYEP +  C R+N  L      DE                                 +A+ QPT+KFLRM++S+ +   D +ALP L +YR GE +  +  +  D G+ FT+ D+EWLL
Sbjct:    1 MGDLEETIFQRNVPGKYSKWDDVDRNEFHDEPTEKYDQVPAETERPKDSDMELLQYAQQLSNAEVPETIRQSILAERARMTA-TGVKGVLADYRAAQAMAEAEAQAIALHRQQVLTRMTQGAKVQYVAEEEEDETAGLDINDIDSDXXXXXXXDA-FMREFRAKRLQELRGASSSSAGANYTEQTSMFGSVKEVRAEDFVQEVEGEKRNVVVVVHLYEPSVQTCIRLNVLL------DE---------------------------------IAASQPTIKFLRMQASSNEIVVDRVALPILTVYRGGETIETLAGIAADFGQYFTKADIEWLL 293          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A7S1CQF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQF6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 6.860e-30
Identity = 107/355 (30.14%), Postives = 154/355 (43.38%), Query Frame = 1
Query:   52 MGDLEDKILKKNIPGKYTWWEKDSDEEGEGARA--DWLDGEASDPEAELTELQKQQKWVE--------SDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLGGVDDEDRDEAEEDAGDEE-------------------FLGSYRRRRLEQLKASAGRPHFGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVFE 1029
            M DLE +I++ N+       + DSDEEG  AR   D  D   SD E             E        +  P P+      R       TG KGV+ DY   +R +  +       RA ++ +   G  V  + P+    +   V +      ++DA                       FL  YR RRL Q++A++GR  +G ++E  +A+FV EVD  DPR FVVVH+YE +I AC ++NR L                                         +A+++P  KFLR+ ++ ADK YD I LPTLLLYR GE V  + RV + + E F  D++E LL  + VF+
Sbjct:    5 MADLERRIMRPNLMR-----DADSDEEGPRARGVEDDSDFSESDDEGGXXXXXXXXXXGEPMTAMPGSTGLPAPVEDVATGRHN-----TGPKGVIEDYRQHKRQERVKRERDELKRAELIAKTATG--VEAAGPSVAYSATAAVREATMKHRDDDASXXXXXXXXXXXXXXXXXXXXXXFLREYRARRLAQMRAASGRTTYGGVKEVSKATFVDEVDRTDPRAFVVVHMYETFIPACVQVNRALPE---------------------------------------VAARRPYTKFLRLVATDADKDYDHITLPTLLLYRGGETVEALVRVADGMPEGFGADEIEELLARNGVFD 308          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: F0XWS7_AURAN (Phosducin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS7_AURAN)

HSP 1 Score: 108 bits (271), Expect = 2.690e-23
Identity = 105/341 (30.79%), Postives = 148/341 (43.40%), Query Frame = 1
Query:   52 MGD--LEDKILKKNIPGKYTWWEKDSDEEGEGARADWLDG---EASDPEAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLGGVDDEDRDEAEE-------------DAGDEEFLGSYRRRRLEQLKASAGRPHFGQIR-EADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKS---YDPIALPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLL 1008
            MGD  LEDK L+KNIPG+Y  W+KDSDEEG G RAD L G   E S+ +  + +L         D PEP+R          R   G KG+LA +  +++ + AE +   E R   L  +  G +    AP      L     E   E  E                  EFL  YR+ R+  L++  G P FG  +    +  ++  +D  D RT VVVHLYEP    C R+N+ L+V                                       LA ++  + F+ MR S A  +   +D    P L++YR+G VV    +V +D+G +F   D+E LL
Sbjct:   27 MGDWGLEDKFLRKNIPGRYEHWDKDSDEEG-GGRADSLGGSEDEESEDDDPIPDLPGPM-----DDPEPLR---YGEAPDARKMPGNKGILAQHRYFKKMQYAERVELAEERERKLLDVARGRLRDPDAPPXXXVQLTERQREAMAELREAXXXXXXXXXXXXXXXXXEFLEEYRKMRIAALRSVQGMPTFGAFKVNCSKEEYLQALDV-DARTLVVVHLYEPTFPKCRRVNQCLDV---------------------------------------LAGRRREISFVGMRLSEAGDACAGWDSEVFPVLVVYRAGSVVETFFQVGKDIGATFDYADIESLL 318          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A7S3PR85_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR85_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.890e-22
Identity = 103/328 (31.40%), Postives = 156/328 (47.56%), Query Frame = 1
Query:   58 DLEDKILKKNIPGKYTWWEKDSDEEGEGARADWLDGEASDPEAELTELQKQQKWVESDCPEPIR--RTIVARQEKERARTGVKGVLADYGDW----RRSKNAEALLARE-YRAAMLKRMTEGHVVPGSAPARPVE-SLGGVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHFGQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIALPTLLLYRSGEVVG--CVTRVTEDLGES-FTQDDVEWLL 1008
            +LE K L +++       E+DSDE+G G +  ++     D +   +  ++  K V+ D P P R    ++ +Q K    TG KGV ADY +     RR    + L  RE +R   L   + G  +  ++  + +  SL    D D DE E D G+   L   R+ RL+Q+K  A  P +G++ +  +  FV EVD  DPRT VVVHL+E YI AC RMN  L+                                        LASK P +KF++++++ AD++    ALP  ++Y +G++V    V  V  ++G   FT  DVEWLL
Sbjct:    7 ELERKYLTQDL-----LQERDSDEDG-GEKTRYV----IDSDFSWSSEEENAKPVKEDAPHPDRDWSKLLTKQRKY-GNTGPKGVKADYEEAQRIIRRQNETKVLKDREEFRRQALGNSSSGTSLSYASQKKGISGSLVKSYDAD-DEIEIDDGEAIIL-KMRKMRLQQMKELAALPQWGRVLQVSKFQFVDEVDKADPRTPVVVHLFEDYINACRRMNDILDR---------------------------------------LASKHPFIKFIKLKATDADQTLSHSALPAFMVYVNGQLVNEAGVNVVNTEIGNDLFTDTDVEWLL 282          
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Match: A0A6U3QXS5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QXS5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.240e-20
Identity = 87/314 (27.71%), Postives = 132/314 (42.04%), Query Frame = 1
Query:   52 MGDLEDKILKKNIPGKYTWWEKDSDEEGEGARADWLDGEASDPEAELTELQKQQKWVESDCPEPIRRTI-----VARQEKERARTGVKGVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVP----GSAPARPVESLGGVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHF-GQIREADRASFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGDITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIALPTLLLYRSGEVVGCVTRVTE 963
            M  LED+ILK+NIPGKY+WW  D+D+E                   L E+++ ++W     P+P++ +      V     +   TG KGVL DY   R  ++    +    R  +L+R TEG  +       + A                        EFL +YR+ RL QL+ +   P + G++ E     + S VDT DPR   +VHLYEP I  C ++N  LE                       C                 AS +   KF+++R+  A  + D I LPT+++YR G +   + R T+
Sbjct:    1 MSGLEDRILKQNIPGKYSWW--DNDDEARPNXXXXXXXXXXXENNSLNEVEQVKQWDAQGVPKPLQISALEGGPVPHNGGKSQNTGAKGVLNDYRQTRAIESHNRQVEALERQDLLRRATEGATLQQGDVAMSAAXXXXXXXXXXXXXXXXXXXXXXXXEFLKNYRKNRLRQLQLTTHWPSYDGKVEEVTPEEYSSLVDTIDPRVHFIVHLYEPSIRDCVKLNSMLE----------------------RC-----------------ASLKKYAKFVKLRALDAKPNMDCIVLPTIMIYRGGNLEHNLVRFTQ 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13860.2697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Z4_9PHAE1.470e-13866.06Phosducin domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKQ5_9STRA5.230e-10453.03Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7R9UGG9_9STRA3.670e-5637.99Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B798_9STRA2.670e-4532.74Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RCN5_9STRA1.050e-3633.33Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3GW90_9STRA2.780e-3632.93Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1CQF6_9STRA6.860e-3030.14Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
F0XWS7_AURAN2.690e-2330.79Phosducin domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S3PR85_9STRA9.890e-2231.40Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A6U3QXS5_9STRA3.240e-2027.71Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13860contigH-elongata_contig13860:4276..6906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.8
Seed ortholog evalue3.8e-113
Seed eggNOG ortholog2880.D8LEJ7
Preferred namePDCL
KEGG koko:K08327,ko:K15690
GOsGO:0001750,GO:0003008,GO:0003674,GO:0004857,GO:0004859,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0006139,GO:0006457,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007600,GO:0007601,GO:0007602,GO:0008150,GO:0008152,GO:0008277,GO:0008589,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016043,GO:0018130,GO:0019438,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0032501,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042995,GO:0043005,GO:0043086,GO:0043226,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0045880,GO:0046116,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051606,GO:0051716,GO:0055086,GO:0055102,GO:0061083,GO:0061084,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098772,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902605,GO:1903332,GO:1903333
EggNOG free text desc.heterotrimeric G-protein complex assembly
EggNOG OGsKOG3171@1,KOG3171@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-21_004390.1
Exons4
Model size1031
Cds size1029
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13860.2697.1prot_H-elongata_contig13860.2697.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13860 4276..6906 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929822.6948574-CDS-H-elongata_contig13860:4275..45791622929822.6948574-CDS-H-elongata_contig13860:4275..4579Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 4276..4579 -
1691679172.613769-CDS-H-elongata_contig13860:4275..45791691679172.613769-CDS-H-elongata_contig13860:4275..4579Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 4276..4579 -
1622929822.7163494-CDS-H-elongata_contig13860:4931..53101622929822.7163494-CDS-H-elongata_contig13860:4931..5310Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 4932..5310 -
1691679172.625058-CDS-H-elongata_contig13860:4931..53101691679172.625058-CDS-H-elongata_contig13860:4931..5310Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 4932..5310 -
1622929822.7367778-CDS-H-elongata_contig13860:5924..62161622929822.7367778-CDS-H-elongata_contig13860:5924..6216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 5925..6216 -
1691679172.6335511-CDS-H-elongata_contig13860:5924..62161691679172.6335511-CDS-H-elongata_contig13860:5924..6216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 5925..6216 -
1622929822.7518651-CDS-H-elongata_contig13860:6852..69061622929822.7518651-CDS-H-elongata_contig13860:6852..6906Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 6853..6906 -
1691679172.641368-CDS-H-elongata_contig13860:6852..69061691679172.641368-CDS-H-elongata_contig13860:6852..6906Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13860 6853..6906 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13860.2697.1

>prot_H-elongata_contig13860.2697.1 ID=prot_H-elongata_contig13860.2697.1|Name=mRNA_H-elongata_contig13860.2697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=343bp
FLRNRFSLPVVSGTLSRMGDLEDKILKKNIPGKYTWWEKDSDEEGEGARA
DWLDGEASDPEAELTELQKQQKWVESDCPEPIRRTIVARQEKERARTGVK
GVLADYGDWRRSKNAEALLAREYRAAMLKRMTEGHVVPGSAPARPVESLG
GVDDEDRDEAEEDAGDEEFLGSYRRRRLEQLKASAGRPHFGQIREADRAS
FVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVTGTRDEAQTRRLTGD
ITPIPTLCPNETQPLTPFLSLAQVLASKQPTVKFLRMRSSAADKSYDPIA
LPTLLLYRSGEVVGCVTRVTEDLGESFTQDDVEWLLQEHDVFE
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mRNA from alignment at H-elongata_contig13860:4276..6906-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13860.2697.1 ID=mRNA_H-elongata_contig13860.2697.1|Name=mRNA_H-elongata_contig13860.2697.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2631bp|location=Sequence derived from alignment at H-elongata_contig13860:4276..6906- (Himanthalia elongata Himel1 dioecious)
TTTCTCCGTAACAGGTTTTCTCTCCCTGTCGTGTCTGGGACGCTATCAAG AATGGTGAGCAATCGATGACCCCATCAAGCTTGCTTCATTGTTCCAGGAT ATTTTTTGCCCCTAATCCAGCAAAGAATTATGTCAACCTTGAGTTAAAAA CACGCGGCAAATCAACCTTTCGAAAAGTTTGAATGAGTTCAGAGTGGCAA AAAAAGTGATCTGCAGAATAAACCTCACGGCACCTCCCCTCTGCACGTGC GCGAAGGAGCCGAGAAATCACGCCCGCGAGGCCATTTCGTCTACATCCGT TGATCTCTTGACTCTTATCTTGTGATGTGATTTTTTTTTGACGAAGCATT TCCTTCTCACCCCGTCCGTGACTCGATCTCGTTAGAGCAGTAGACTTAGC AGAGTCTATCGATAGAAAGCCCGATTGATATCCAGTACATATCACACTTG GCAATAGGCAGTAGGAGCTAAACAGGCATATCTAGTACTTGTAGGAAAAT ATCTGAATCTTTGTTGCGGCGTGCGTAATCGACTGGCTCAGGTAGAACCA AAGGTAGCTTGACGCGCCTGCAAAGTTTCACACCCACAGCCCCCCCACTC ATGGTTTTCCTCTTTAGATTCTCTAGAGCTAGCTTATACATAAAACGTGC AACGAGGTCTTGTTGACATGTTGCGACGCCCCCGTTCAAGGGGGATCTCG AGGACAAGATCTTGAAAAAGAACATTCCCGGAAAATACACGTGGTGGGAG AAGGACAGCGACGAGGAGGGGGAGGGAGCGAGGGCGGACTGGTTGGACGG CGAAGCCAGCGACCCTGAGGCAGAGCTGACGGAGCTGCAGAAGCAACAGA AGTGGGTGGAGAGCGATTGCCCCGAGCCCATCCGACGCACAATCGTGGCG CGGCAGGAGAAGGAGAGGGCAAGGACGGGGGTGAAGGGAGTCCTAGCCGA CTACGGCGATTGGAGGCGCTCAAAGAATGCAGGTTAGACGAACGGAGCCC GACCGCTTTCGTAAAGCTCTGTGGCAGCTTGCGGGTTGATTCGAGCTTGT CTTTTGTGTGCAGCAGGCAAATAAAGACGCGCTTCTCGCAGACGGGAACC GCGGAGGGAGATAGGTACATATAGATACGTAGATCCCTGAGGACCGCGGG CAGGATTGGCAGGGCAGCGTTGCACTATTATATTTTTATTTGAAAGACTT TAGGCTCATTCTCACTCTCCGAACATCCACACCTTCATGCACCATAGAAG TTAAGACTTGGTAAGCTATCAATAGCACGTTGAATGGCCGGAGGAAGAAA AATAGAACAAAACAAAGCAAAAATACGACACACACAAATATCTGAATACA TGGTACGATAAGTCGCGCACGTAGGAGTGTGACGACGCGAGCTCCGCGTA AGCACGCTTATACCTCCGGCACCCTGCCTTGGACAAGCTCTCGCGGAAAA ACGAAACCCGACCCTGTAATGACACGTCACAGCCACGCACTTTATTATTA TTATTATTATTAAATATATATATAATATATATATATTTGCCTTTCGTTTC TCTTTTCCCGTTCCTGCATCCTACTCTTTCACTTCCTTACCTTAAGAGGC CCTCCTCGCAAGAGAATACCGAGCCGCGATGCTCAAGCGCATGACGGAAG GCCACGTCGTCCCGGGATCCGCTCCGGCTAGGCCGGTGGAAAGCCTAGGT GGAGTTGACGACGAAGACCGAGACGAAGCTGAGGAAGACGCAGGCGACGA GGAGTTCCTAGGGAGCTACCGGAGGCGTCGGTTGGAGCAGCTGAAAGCGT CCGCGGGTCGCCCGCATTTCGGACAGATCCGGGAGGCGGATCGTGCCAGC TTCGTTTCGGAGGTGGACACGGAAGACCCCCGGACCTTTGTCGTCGTCCA TCTGTACGAGCCGTATATCGGGGCGTGCGGTCGCATGAACCGCTTCTTGG AGGTGACGGGCACGCGCGATGAAGCGTGATGGAACACAATGAGCTCTCGC CGCTTCGCGCTTTGCTTGGCAGATTAAGTATGCTCAGTCCACCCCGGCGA TTGCCTTCGATGAGGCGGGTTAACCAGTGTGGTTAGTGCAACCATGCTGG GACCTTCACATGCTGTACCGGCACGTATTGCGCGATCTCGTCCATCCACC CGGCTCGAACACTGCACCGCAGTAATCGCTGTCCTAAACGCCACAGGCTA CTTGGCCCAACGATTCTTCTTTTGGTCGGTACGCTATATGGGCAAGCGCA TGACAGTTTTCGAAAGAAACGAGAGCTTTCTGGCTCTTCGCGGGTTCTTA CAAACACATGCACACACGAAGCAGAAGACAGACACGCCGGTTAACGGGAG ATATTACTCCGATCCCGACCCTTTGTCCTAACGAAACCCAGCCTCTCACG CCTTTCCTCTCCCTCGCCCAGGTGCTAGCCTCGAAGCAGCCGACGGTGAA ATTCTTGCGGATGAGGAGCTCAGCGGCAGACAAATCATACGACCCGATAG CGTTGCCGACGCTGCTGCTGTACAGGTCGGGCGAGGTCGTTGGATGTGTG ACGCGCGTGACGGAAGACCTCGGAGAGAGCTTCACGCAGGATGACGTGGA GTGGCTGCTCCAGGAGCACGACGTATTTGAG
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Coding sequence (CDS) from alignment at H-elongata_contig13860:4276..6906-

>mRNA_H-elongata_contig13860.2697.1 ID=mRNA_H-elongata_contig13860.2697.1|Name=mRNA_H-elongata_contig13860.2697.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2058bp|location=Sequence derived from alignment at H-elongata_contig13860:4276..6906- (Himanthalia elongata Himel1 dioecious)
TTTCTCCGTAACAGGTTTTCTCTCCCTGTCGTGTCTGGGACGCTATCAAG
AATGTTTCTCCGTAACAGGTTTTCTCTCCCTGTCGTGTCTGGGACGCTAT
CAAGAATGGGGGATCTCGAGGACAAGATCTTGAAAAAGAACATTCCCGGA
AAATACACGTGGTGGGAGAAGGACAGCGACGAGGAGGGGGAGGGAGCGAG
GGCGGACTGGTTGGACGGCGAAGCCAGCGACCCTGAGGCAGAGCTGACGG
AGCTGCAGAAGCAACAGAAGTGGGTGGAGAGCGATTGCCCCGAGCCCATC
CGACGCACAATCGTGGCGCGGCAGGAGAAGGAGAGGGCAAGGACGGGGGT
GAAGGGAGTCCTAGCCGACTACGGCGATTGGAGGCGCTCAAAGAATGCAG
GGGGATCTCGAGGACAAGATCTTGAAAAAGAACATTCCCGGAAAATACAC
GTGGTGGGAGAAGGACAGCGACGAGGAGGGGGAGGGAGCGAGGGCGGACT
GGTTGGACGGCGAAGCCAGCGACCCTGAGGCAGAGCTGACGGAGCTGCAG
AAGCAACAGAAGTGGGTGGAGAGCGATTGCCCCGAGCCCATCCGACGCAC
AATCGTGGCGCGGCAGGAGAAGGAGAGGGCAAGGACGGGGGTGAAGGGAG
TCCTAGCCGACTACGGCGATTGGAGGCGCTCAAAGAATGCAGAGGCCCTC
CTCGCAAGAGAATACCGAGCCGCGATGCTCAAGCGCATGACGGAAGGCCA
CGTCGTCCCGGGATCCGCTCCGGCTAGGCCGGTGGAAAGCCTAGGTGGAG
TTGACGACGAAGACCGAGACGAAGCTGAGGAAGACGCAGGCGACGAGGAG
TTCCTAGGGAGCTACCGGAGGCGTCGGTTGGAGCAGCTGAAAGCGTCCGC
GGGTCGCCCGCATTTCGGACAGATCCGGGAGGCGGATCGTGCCAGCTTCG
TTTCGGAGGTGGACACGGAAGACCCCCGGACCTTTGTCGTCGTCCATCTG
TACGAGCCGTATATCGGGGCGTGCGGTCGCATGAACCGCTTCTTGGAGGT
GACGGGCACGCGCGATGAAGCAGGCCCTCCTCGCAAGAGAATACCGAGCC
GCGATGCTCAAGCGCATGACGGAAGGCCACGTCGTCCCGGGATCCGCTCC
GGCTAGGCCGGTGGAAAGCCTAGGTGGAGTTGACGACGAAGACCGAGACG
AAGCTGAGGAAGACGCAGGCGACGAGGAGTTCCTAGGGAGCTACCGGAGG
CGTCGGTTGGAGCAGCTGAAAGCGTCCGCGGGTCGCCCGCATTTCGGACA
GATCCGGGAGGCGGATCGTGCCAGCTTCGTTTCGGAGGTGGACACGGAAG
ACCCCCGGACCTTTGTCGTCGTCCATCTGTACGAGCCGTATATCGGGGCG
TGCGGTCGCATGAACCGCTTCTTGGAGGTGACGGGCACGCGCGATGAAGC
ACAGACACGCCGGTTAACGGGAGATATTACTCCGATCCCGACCCTTTGTC
CTAACGAAACCCAGCCTCTCACGCCTTTCCTCTCCCTCGCCCAGGTGCTA
GCCTCGAAGCAGCCGACGGTGAAATTCTTGCGGATGAGGAGCTCAGCGGC
AGACAAATCATACGACCCGATAGCGTTGCCGACGCTGCTGCTGTACAGGT
CGGGCGAGGTCGTTGGATGTGTGACGCGCGTGACGGAAGACCTCGGAGAG
AGCTTCACGCAGGATGACGTGGAGTGGCTGCTCCAGGAGCACGACGTATT
TGAGACAGACACGCCGGTTAACGGGAGATATTACTCCGATCCCGACCCTT
TGTCCTAACGAAACCCAGCCTCTCACGCCTTTCCTCTCCCTCGCCCAGGT
GCTAGCCTCGAAGCAGCCGACGGTGAAATTCTTGCGGATGAGGAGCTCAG
CGGCAGACAAATCATACGACCCGATAGCGTTGCCGACGCTGCTGCTGTAC
AGGTCGGGCGAGGTCGTTGGATGTGTGACGCGCGTGACGGAAGACCTCGG
AGAGAGCTTCACGCAGGATGACGTGGAGTGGCTGCTCCAGGAGCACGACG
TATTTGAG
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