mRNA_H-elongata_contig13827.2678.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE) HSP 1 Score: 273 bits (698), Expect = 4.330e-78 Identity = 132/203 (65.02%), Postives = 159/203 (78.33%), Query Frame = 1
Query: 874 MGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
MGR VVFWN YTM VLA+ +GHA V+HC++D+ S RVIT+S DK V CWDS TFRC+Q+ FKD R H P+DTITAALWD +R SLV+AG+ LGVWKNKGAIQ+S SHEA VTAALYN +++Q+VSGD MGN+HVWLVETG +AFR+G+AHG+SKISCM FD S+RRL+TGANDG VKLWNF++GK
Sbjct: 1 MGRAVVFWNSYTMHVLAR--RDGHAAT-VRHCLVDDRSDRVITISADKAVRCWDSATFRCIQS--------------FKDHRMHRPDDTITAALWDHSRSSLVVAGSRLGVWKNKGAIQSSKHSHEAPVTAALYNWHFHQIVSGDAMGNVHVWLVETGLLAFRFGKAHGTSKISCMAFDASERRLLTGANDGTVKLWNFNSGK 186
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI) HSP 1 Score: 264 bits (675), Expect = 1.510e-74 Identity = 140/289 (48.44%), Postives = 170/289 (58.82%), Query Frame = 1
Query: 616 IISGPQDPREAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
+ +G QD REAA+L+GN+S +H+GAI V YV D+NA VTCG+DGK+HFFD+ KRR RTF GH + VF+F Y RHRF SAGMGR VVFWN YTM VLA+ +GHA N V+HC++D+ S RVIT+S DK V CWDS TFRC+Q +VSGD MGN+HVWLVETG +AFR+G+AHG+SKISCM FD S+RRL+TGANDG VKLWNF+NGK
Sbjct: 50 LHAGLQDTREAADLHGNYSLPLHSGAISCVGYVADLNATVTCGVDGKIHFFDLTKRRTTRTFMGHVDRPVFAFAYSKRHRFVVSAGMGRAVVFWNSYTMHVLAR--RDGHAAN-VRHCLVDDRSDRVITISADKAVRCWDSATFRCIQ------------------------------------------------------------------------------IVSGDAMGNVHVWLVETGLLAFRFGKAHGTSKISCMAFDASERRLLTGANDGTVKLWNFNNGK 257
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A6H5L354_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L354_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.130e-65 Identity = 116/182 (63.74%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 1 LDEGNRNMARAAHMVDLRPLPTGTTPDP-RHWGKSSNHRGMIEKARSLVINVERTSISAYVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQVSA 543
LDEGNRNMA AAHMVDL+PLP H G+ HR MIEK VINVER ISAY+TCGRDG IKFW+K TFAH R+I HLDT+KA Y ++ G K +G R V + +AV S+K AWV DIQQ MPLSNRIA AC DRTVSFY++LTGEFVCRI GLRSSPTCVDC+++SA
Sbjct: 69 LDEGNRNMAAAAHMVDLKPLPRNQRAGADEHAGQ---HRDMIEK----VINVERPGISAYLTCGRDGAIKFWNKGTFAHYRTIRHLDTMKAAYEIIITGGKGREVDGNGRRVCSAEVNRAVKSMKSAWVYDIQQ-MPLSNRIAAACFDRTVSFYDVLTGEFVCRIGGLRSSPTCVDCVEISA 242
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A0G4J6Z8_PLABS (EF-hand domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6Z8_PLABS) HSP 1 Score: 192 bits (489), Expect = 1.340e-49 Identity = 144/529 (27.22%), Postives = 220/529 (41.59%), Query Frame = 1
Query: 1 LDEGNRNMARAAHMVDLRPLPTGTTPDPRHWGKSSNHRGMIEKARSLVINVERTSISAYVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAG--------------------------LRSSPTCVDCLQVSAIKQQVIFGDLDGRLHVWAFGKNFYIISGP-----QDPREAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQ---LRTFDGHDNHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHG-SSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
L E N +L P P D H HR MIE V+ + +T YVT RDGT K W+ H+R++ +S ++G C +P SNR+A+ D FY+ + E V R L + P CV + S + + GD G + + AF + ++ G D + + +H + + ++ +++A VT LD V F D+ + Q + F GH V+SF +C ++F S G R + W+P+ + G A V +++E+ +++I+++ DKT+ WD FRC+Q D + PE+ I+ W K L+ A N L VW +K QA T SH+ S+ A+YN + QVVSGD + VW +ETG F Y H +S I+ M D S RRL+TG +DG VK+WNFS+G+
Sbjct: 89 LMENQANEFNDTSFDELVPSPVPEPADNAHH----YHRDMIE----TVLYIPKTD--KYVTSSRDGTFKVWNCKDRLHVRTVR-------CGNSWIIG-------------------------SCL--------LPRSNRLAMVSADLRAHFYDATSIELVSRFNDDPVTRNNGLTFAELRRQQQPQRLQTMLENMPVCVTGIP-SPTEDIMAIGDTMGTITIHAFDEKWHACDGAIAECSHDSPKCIGVRREAFPGVHTDWVTDIKWIPELDALVTSSLDRTVKFLDVERHGQDPVRKKFTGHRK-GVYSFDFCAGYKFMVSCGSSRRITAWDPFRCREINSLSGHMAAVQQV---VVNEDKNQIISLAVDKTIKVWDVRNFRCMQT--------------ITDANHYRPENRISRLTWVKAHSCLLAATNRLDVWPSKAVSQAETLSHDHSICTAIYNSNFGQVVSGDVGSQVKVWDLETGRSVFSYRNVHRRASSITAMALDASMRRLITGGDDGSVKVWNFSSGQ 548
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A812VAD4_9DINO (Wdr64 protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VAD4_9DINO) HSP 1 Score: 192 bits (488), Expect = 2.540e-49 Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query: 175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
Y+T GRDG +K WH + H +D + + SW + C W M S ++AVA + FY+ V I +P C+ S+ K+ ++ GD G + V+ N+++ Q+P+ + + + ++ H + V +V+ + A VTC LDG+++ D+ ++ D H V S+ +C ++FFAS G R ++ WNPYT + +G +V +++E+ ++I++S DK V WD ++C+Q F D + PED +T +D+ +LVL + + V +Q S R+H A + ALYN ++Q++SGD G + VW ++TG++ F + +AH K++CM FD S+R L TG DG VKLWNFS+G+
Sbjct: 166 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 553
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A7S1A9E2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9E2_NOCSC) HSP 1 Score: 192 bits (488), Expect = 2.580e-49 Identity = 138/451 (30.60%), Postives = 216/451 (47.89%), Query Frame = 1
Query: 175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEM-LTGEFVCRIAGLRSSPTCV---DCLQVSAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSD-----QIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHD------NHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
YVT GRDG +K W+ + H RSI+ + G KSW ++S C W M S R+A+A + FY+ + I +P C+ + + +A + ++ GD G + V+ +++ +AE F+ Q H + V +V+++ A VTCGLDG ++ D+ R T DG V ++ +C ++FFAS G+ R VV WNPYT + +G + ++ ++ E S++I++S DK V WD +RC+Q F D + PED +T +D+ +L+L +++ V ++ S R+H A + ALYN + QVVSGD +G I VW V TG++ F + + G K++CM FD S+RRL TGA DG VKLWNFS+G+
Sbjct: 181 YVTAGRDGVVKVWNPNLQLH-RSID-----------VAGGHKSW-----------------LSS--CCW-------MNKSRRLAIASSRFKIYFYDSSFNNTALGHIEHKEGTPLCLGYHESNESNAQNEMLMVGDTSGCVTVYPLTEDW--------TEHSAETPIAFNPKPLRRQYHTDWVTKVGFVSELQAMVTCGLDGDINCCDVHANR---TKDGRGPIPRLHKKGVHTWCWCKSYKFFASGGLDRQVVIWNPYTQKPMNHLQGHNASILDI---LMHENQSQLISLSVDKVVKVWDIRNYRCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALILCSSSMNVLPVNVHVETS-RTHMAPIVGALYNDVFKQVVSGDHLGTICVWDVRTGKMDFEF-RVQGDHKVTCMAFDESKRRLFTGAEDGVVKLWNFSSGQ 563
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A812U6I5_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U6I5_SYMMI) HSP 1 Score: 192 bits (488), Expect = 3.080e-49 Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query: 175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
Y+T GRDG +K WH + H +D + + SW + C W M S ++AVA + FY+ V I +P C+ S+ K+ ++ GD G + V+ N+++ Q+P+ + + + ++ H + V +V+ + A VTC LDG+++ D+ ++ D H V S+ +C ++FFAS G R ++ WNPYT + +G +V +++E+ ++I++S DK V WD ++C+Q F D + PED +T +D+ +LVL + + V +Q S R+H A + ALYN ++Q++SGD G + VW ++TG++ F + +AH K++CM FD S+R L TG DG VKLWNFS+G+
Sbjct: 479 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 866
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A813C677_9DINO (Atg6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C677_9DINO) HSP 1 Score: 192 bits (488), Expect = 3.470e-49 Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query: 175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
Y+T GRDG +K WH + H +D + + SW + C W M S ++AVA + FY+ V I +P C+ S+ K+ ++ GD G + V+ N+++ Q+P+ + + + ++ H + V +V+ + A VTC LDG+++ D+ ++ D H V S+ +C ++FFAS G R ++ WNPYT + +G +V +++E+ ++I++S DK V WD ++C+Q F D + PED +T +D+ +LVL + + V +Q S R+H A + ALYN ++Q++SGD G + VW ++TG++ F + +AH K++CM FD S+R L TG DG VKLWNFS+G+
Sbjct: 1043 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 1430
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A1Q9E9P6_SYMMI (WD repeat-containing protein 64 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E9P6_SYMMI) HSP 1 Score: 192 bits (488), Expect = 3.700e-49 Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query: 175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
Y+T GRDG +K WH + H +D + + SW + C W M S ++AVA + FY+ V I +P C+ S+ K+ ++ GD G + V+ N+++ Q+P+ + + + ++ H + V +V+ + A VTC LDG+++ D+ ++ D H V S+ +C ++FFAS G R ++ WNPYT + +G +V +++E+ ++I++S DK V WD ++C+Q F D + PED +T +D+ +LVL + + V +Q S R+H A + ALYN ++Q++SGD G + VW ++TG++ F + +AH K++CM FD S+R L TG DG VKLWNFS+G+
Sbjct: 1666 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 2053
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A812RAY7_9DINO (Wdr64 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RAY7_9DINO) HSP 1 Score: 186 bits (473), Expect = 2.560e-48 Identity = 123/446 (27.58%), Postives = 207/446 (46.41%), Query Frame = 1
Query: 175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDP----REAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
Y+T GRDG +K WH + H +D + + SW + C W M S ++AVA + FY+ + I +P C+ S+ K+ ++ GD G + V+ N ++ P+ + ++ + H + V +V+ + A VTC LDG+++ D+ ++ D H V S+ +CT ++FFAS G R ++ WNPYT + +G +V +++E+ ++I++S DK V WD ++C+Q F D + PED +T +D+ +LVL + + V +Q S R+H A + AL+N ++Q++SGD G + VW ++TG++ F + +AH K++CM FD +R L TG DG VKLWNFS+G+
Sbjct: 166 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSSLSP-ITHIDHKDGTPLCLGYTDSHENKSSEKEILMVGDDKGYVSVYPLDANDWLDQEPKSEGKPDSDGLKVKKMSRTKYHKDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCTNYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQLISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPVSVKVQTS-RTHLAPIVGALHNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDEPKRCLYTGGEDGCVKLWNFSSGQ 553 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13827.2678.1 >prot_H-elongata_contig13827.2678.1 ID=prot_H-elongata_contig13827.2678.1|Name=mRNA_H-elongata_contig13827.2678.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=487bp MARAAHMVDLRPLPTGTTPDPRHWGKSSNHRGMIEKARSLVINVERTSISback to top mRNA from alignment at H-elongata_contig13827:2025..7500+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13827.2678.1 ID=mRNA_H-elongata_contig13827.2678.1|Name=mRNA_H-elongata_contig13827.2678.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5476bp|location=Sequence derived from alignment at H-elongata_contig13827:2025..7500+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13827:2025..7500+ >mRNA_H-elongata_contig13827.2678.1 ID=mRNA_H-elongata_contig13827.2678.1|Name=mRNA_H-elongata_contig13827.2678.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2922bp|location=Sequence derived from alignment at H-elongata_contig13827:2025..7500+ (Himanthalia elongata Himel1 dioecious)back to top |