mRNA_H-elongata_contig13816.2670.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: A0A7L4XTJ3_SACJA (Mannuronate C5-epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XTJ3_SACJA) HSP 1 Score: 451 bits (1161), Expect = 3.810e-148 Identity = 265/365 (72.60%), Postives = 304/365 (83.29%), Query Frame = 3
Query: 3 SDTSSSAPIIALHGKISIMDTVIVSYDESEGGPDERLEDRAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDNVFAGIDSLRFDNATETLVAGNVLPEGVSFNLDEGATLAEGSQEPTD 1097
SD +S APIIA+ G+ISI+DT I SYDES+GG DERLE RAYIAALS E + + W SRMDV +SEISYLGNEGDYHNDINN +GLVWKVEGYDDRFPGDL LF RVGVYG+L +K+H +IGAYCYGMKG+++W+GNE+Y+N L G+NPQDNSD MTI+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NT +RNL GDFGI E GVT+HDNVMEGGKYG+R+S+GA+ECDVY+N+MSD+ RYGVFFYRGSDEAEASA+W+GRP N IR N IS PVEG+GVAVT SD N I+DN F GIDSLRFD+A TLV GN+LP+GV F LD+GATLA+GSQ TD
Sbjct: 121 SDETSYAPIIAMAGQISILDTAITSYDESKGGSDERLEGRAYIAALSLEDETTGEAWISRMDVEDSEISYLGNEGDYHNDINNDYGLVWKVEGYDDRFPGDLSLFSRVGVYGTLKRNKIHDMFIGAYCYGMKGNTLWTGNEIYDNYLNGMNPQDNSDGMTISDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTDYAEAYGNTCRRNLEGDFGIVESTGVTVHDNVMEGGKYGIRLSLGAQECDVYDNVMSDNFRYGVFFYRGSDEAEASADWDGRPRLNYIRNNKISDPVEGKGVAVTGSDDNFIIDNEFIGIDSLRFDDAQNTLVTGNILPDGVEFTLDDGATLADGSQSDTD 485
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: A0A6H5JBI1_9PHAE (MEP14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI1_9PHAE) HSP 1 Score: 432 bits (1111), Expect = 1.480e-140 Identity = 265/365 (72.60%), Postives = 315/365 (86.30%), Query Frame = 3
Query: 3 SDTSSSAPIIALHGKISIMDTVIVSYDESEGGPDERLEDRAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDNVFAGIDSLRFDNATETLVAGNVLPEGVSFNLDEGATLAEGSQEPTD 1097
SD +SSAPIIA HGK+SI+DT I S+D S GGPDERLE RAYIAALS E+ QT V+ SRMDV +SEIS+LGNEGDYHND ++ +GL+WKV+GYDDR+ GDLD+F+R+GVYG L + +H NYIGAYCYGMKG S W+ NE+Y+N L G+NPQDNSD MTI+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RNL GDFGI E GV ++DNVMEGGKYG+R+S+GA+EC+VY+N++SDSTRYGVFFYRGSDEAEASA+W+GRP N+IR+N+IS PVE +GVAV +SD ILDN F+GIDSLRFD++TETLV GN LP+GV+F+L+ GATLA+GSQ TD
Sbjct: 128 SDITSSAPIIAWHGKLSILDTAITSWDASLGGPDERLESRAYIAALSGENGAQTVVYTSRMDVEDSEISFLGNEGDYHNDTDSDYGLLWKVQGYDDRYGGDLDIFDRIGVYGGLKRNSIHDNYIGAYCYGMKGDSNWTDNEIYDNYLNGMNPQDNSDGMTISNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRRNLEGDFGIVESTGVKVYDNVMEGGKYGIRLSLGAQECEVYDNVISDSTRYGVFFYRGSDEAEASADWDGRPRLNVIRDNTISDPVEEKGVAVKESDNTMILDNKFSGIDSLRFDDSTETLVTGNELPDGVAFDLENGATLADGSQSSTD 492
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: D7FSX3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX3_ECTSI) HSP 1 Score: 428 bits (1100), Expect = 2.770e-139 Identity = 265/365 (72.60%), Postives = 313/365 (85.75%), Query Frame = 3
Query: 3 SDTSSSAPIIALHGKISIMDTVIVSYDESEGGPDERLEDRAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDNVFAGIDSLRFDNATETLVAGNVLPEGVSFNLDEGATLAEGSQEPTD 1097
SDT+SSAPIIA HGK+SI+DT I S+D S GGPDERLE RAYIAALS E+ QT V+ SRMDV +SEIS+LGNEGDYHNDI++ +GL+WKV+GYDDR+ GDL +F+RVGVYG L + +H NYIGAYCYGMKG S W+ NE+Y+N L G+NPQDNSD MTI+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RNL GDFGI E GV ++ NVMEGGKYG+R+S+GA+ECDVY+N+MSDSTRYGVFFYRGSDEAEASA+W+GRP N+IR N+IS P E +G+AV +SD ILDN F+GID+LRFD++TETLV GN LP+GV+F+L+ GATLA+GSQ TD
Sbjct: 102 SDTTSSAPIIAWHGKLSILDTAITSWDASLGGPDERLEGRAYIAALSGENGAQTIVYTSRMDVEDSEISFLGNEGDYHNDIDSDYGLLWKVQGYDDRYGGDLGIFDRVGVYGGLKRNSIHDNYIGAYCYGMKGDSNWTDNEIYDNYLNGMNPQDNSDGMTISEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNLEGDFGIVESTGVQVYGNVMEGGKYGIRLSLGAEECDVYDNVMSDSTRYGVFFYRGSDEAEASADWDGRPRLNVIRNNTISDPGEEKGIAVKESDNTMILDNKFSGIDTLRFDDSTETLVTGNELPDGVAFDLENGATLADGSQPSTD 466
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 150 bits (379), Expect = 8.270e-34 Identity = 105/353 (29.75%), Postives = 166/353 (47.03%), Query Frame = 3
Query: 42 GKISIMDTVIVSYDESEGGPDERLED-RAYIAALS-------AESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDL---DLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NTAKRNLGGDFGIFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSIS-YPVEGQGVAVTDSDYNEILDNVFAGIDSLRFDNATETLVAGNVLPEGVSFNLDE 1058
G + DT++ S+D P E E+ R+++ +S E + + ++ E RMD+ NSEI+YLG Y + + ++G+ WKV G F DL ++FE VYG LT S +HH Y G Y YG +G VW+ N++++N G +P D+SDY+TI NT + E I+ N++ G KYG+R+S+G+ +VY N +D ++YG++ Y GSDE + S +GRP N++ N + P+ GV + + D NE N F +D+ F +T T+ +GN + +G DE
Sbjct: 537 GSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLG----YFD--SESYGMTWKVRG----FCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGG-VWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPI---GVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDE 872
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 129 bits (324), Expect = 6.260e-28 Identity = 123/362 (33.98%), Postives = 195/362 (53.87%), Query Frame = 3
Query: 42 GKISIMDTVIVSYDESEGGP-DERLEDRAYIAALSA-------ESDDQTK--VWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFG--IFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEW---NGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDNVFAGIDSLRFDNATETLVAGNVLPEGVSFNLDEGATLAEGS 1082
G + + T + ++D S+ + + R+YI+A+S + D + K + E+RMD+ +SE++YLG +G + ++GL WKV G+ + + ++F+ V VYG++ +S +HHN+ G Y YG + W N++++N G +P D+SD++TI XXXXXXXXXXXXXXXXXXXXXXXXXX GD G + E + +N E KYGVR+S+G + N++SDS++Y V+ Y GSD+ W +GR NI +N+I+ E + +T +D E +DN F + RF++A TL++GN + + +GA + S
Sbjct: 148 GSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQG------SESYGLTWKVRGFC-KDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGD-WRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDP-----WVVDSGRSQDNIFSDNTITGGDES--IKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKS 494
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: A0A1G1WXQ8_9BACT (NosD domain-containing protein n=1 Tax=Candidatus Woykebacteria bacterium RIFCSPLOWO2_01_FULL_41_12 TaxID=1802604 RepID=A0A1G1WXQ8_9BACT) HSP 1 Score: 114 bits (285), Expect = 2.520e-23 Identity = 118/321 (36.76%), Postives = 164/321 (51.09%), Query Frame = 3
Query: 3 SDTSSSAPIIALHGKISIMDTVIVSYDESEGGPDERLED-RAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECIGVTIHDNV-MEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDN 959
S++S + A G I+I T I S+ S D + D RA+I A+S D ESRMD+ NS+I YLG Y+ ++GL WKV G PG ++++V VYG + +++HHNY G Y +G G W NEV NN G +P D+SD+++I XXXXXXXXXXXXXXXXXXXXXXXXX IF+ + DN+ + GKYG+R+S+GA V N S G+ Y+GSD+ + +GRP N+ N + + + + + D+DYN DN
Sbjct: 110 SNSSGYVEVKAYWGSINIESTRISSWTGSS--VDTKYSDGRAFIRAVSYLESDGVTPRESRMDIKNSDIGYLG----YY--AAESYGLAWKVRGVT---PG---IYDKVEVYGDIIGNRIHHNYFGVYTFGAYGGQ-WLNNEVDNNIQYGFDPHDDSDFLSIEGNFVHHNGNHGIICSQRCDHLVIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAIFDSHRNLVRDNISLRNGKYGIRLSVGASYNRVEENDFGWSRLNGIILYKGSDQPTSG---DGRPKNNLFVNNEVHHSRD-YAIVLKDADYNSFADN 411
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: A0A0G0EK59_9BACT (NosD domain-containing protein n=8 Tax=Bacteria candidate phyla TaxID=1783234 RepID=A0A0G0EK59_9BACT) HSP 1 Score: 105 bits (263), Expect = 5.700e-20 Identity = 129/287 (44.95%), Postives = 168/287 (58.54%), Query Frame = 3
Query: 42 GKISIMDTVIVSYDESEGGPDERLED--RAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSIS 896
G I I T I S+DE+ GPD RAYI S D ESRMD+ NS++SYLG G +GL WKV G +F+ VGV+G + +K+H+NY G Y YG + + + NEVY N G++ D+SDY+TI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+ T+ +N + K GVR+S+G+ S++++YG++FY+G D + +GR N + N+I+
Sbjct: 123 GTIDIDSTKITSWDENVSGPDTEYGQYKRAYIQVRSRLDTDGVTPHESRMDIKNSDVSYLGYNGA------EAYGLSWKVLG---------GVFDGVGVFGDVVNNKIHNNYFGVYTYGAE-AMTFVDNEVYENIKYGLDTHDDSDYLTIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDSYRNTLKNNDAKRNKNGVRLSVGSXXXXXXXXXFSENSKYGMYFYKGRDLPTSG---DGRIKSNTFKNNTIN 390
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: A0A536B9N4_9CHLR (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536B9N4_9CHLR) HSP 1 Score: 105 bits (262), Expect = 9.500e-20 Identity = 93/379 (24.54%), Postives = 157/379 (41.42%), Query Frame = 3
Query: 27 IIALHGKISIMDTVIVSYDESEGGPDERL--EDRAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECI-----------GVTIHD---NVMEGGK------YGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDNVFAGI-DSLRFDNATETLVAGNVLPEGVSFNLDEGATLAEGSQEPT 1094
+ A G I I T I S+D++ GPD + R+++ A S D ESRMD+ +S++ YLG +G + +GL WKV G G L + +++ V+G + S +HHNY G Y +G GS+ + GNE+ ++ L G + D+SD MT+T + G +C+ G+TI D N + G YG+R+S+G+ + + N ++ + + G++ Y+GSD + +G P N + N I E G+ TD+D N N +A + + G+ +P+ S ++ ++ Q T
Sbjct: 141 VSARWGTIDIRSTSITSWDDAANGPDTEFATQRRSFLQARSFLDADGVTPHESRMDIIDSDVGYLGFQG------SEAYGLSWKVLG------GTLQVLDQINVFGDIRNSHIHHNYFGVYTFGAFGST-FDGNEMDHSVLYGFDLHDDSDQMTLTNNVSHDNGKHGIIASKRCDHVVIRDNRSYNNVGIGKIGIDKTGAVGVGIMLHR-------GSNDCVIENNEVFGNVTGITIFDSDRNAVRGNSSHDNLLYGIRLSVGSADNTIEQNDIAFNPKGGLYLYKGSD---LPTQGDGHPKGNSVVANMIHDNTE-DGLKATDADDNTFTGNAYAANGEMVLLQRGLRNRFDGDTMPDDGSITAEDNSSTFVSHQAST 495
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: A0A0G1BCB8_9BACT (Beta_helix domain-containing protein (Fragment) n=1 Tax=Candidatus Daviesbacteria bacterium GW2011_GWA2_42_7 TaxID=1618425 RepID=A0A0G1BCB8_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 1.310e-18 Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 3
Query: 3 SDTSSSAPIIALHGKISIMDTVIVSYDESEGGPDERLED--RAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSD 473
S T+S+ I A GKI I T I S+DE GPD R+YI S D ESRMD+ NS+I YLG G + +GL WKV G PG ++++V VYG+++ S++HHNY GAY +G G + GNE+ +N G++P D+SD
Sbjct: 115 SATNSTIWIRAQWGKIDISSTNITSWDEPANGPDTEYTTYKRSYIHTRSYLEADGVTARESRMDIANSDIGYLGFNG------SEAYGLTWKVLG---TTPG---IYDKVNVYGNVSGSRIHHNYFGAYTFGADGMKL-QGNEIDSNIQYGLDPHDDSD 260
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Match: UPI0014231B26 (DNRLRE domain-containing protein n=1 Tax=Aestuariicella hydrocarbonica TaxID=1470433 RepID=UPI0014231B26) HSP 1 Score: 101 bits (252), Expect = 1.930e-18 Identity = 116/364 (31.87%), Postives = 159/364 (43.68%), Query Frame = 3
Query: 27 IIALHGKISIMDTVIVSYDESEGGPD-ERLEDRAYIAALSAESDDQTKVWESRMDVFNSEISYLGNEGDYHNDINNTFGLVWKVEGYDDRFPGDLDLFERVGVYGSLTESKVHHNYIGAYCYGMKGSSVWSGNEVYNNSLVGINPQDNSDYMTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRNLGGDFGIFECIGVTIHDNVMEGGKYGVRISMGAKECDVYNNIMSDSTRYGVFFYRGSDEAEASAEWNGRPLQNIIRENSISYPVEGQGVAVTDSDYNEILDNVFAGIDSLRFDNATETLVAGN---------------VLPEGVSFNLDEGATL 1070
I A +G I I T + S+D + GPD + RAYI S ES+ ESRMD+ NSE+SYLG +H+ + ++GLVWKV G D D +++R+ VYG + S +HHNY+G Y +G G ++ NE N GI+P D+SD++ I XXXXXXXXXXXXXXXXXXXX G D+ + G +FY GSD A NGRP NI R N+ S G+ + + DSD DN+F G + +++ + GN + P V F +DE +
Sbjct: 141 IQAKYGNILIEGTTVSSWDPAANGPDVDSSNGRAYIHVNSIESN--VLAQESRMDISNSEVSYLG----FHD--SESYGLVWKVRGGD----SDETIYDRLEVYGDIVNSYIHHNYMGMYTFGSYGMTI-ENNEFSFNESYGIDPHDDSDWLQILSNDVHDNENHGIICSKRCNNLLISGNVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXTGXXXXXXXXXXXXXXXXXXXXXEDNVKNGAYFYSGSD---LPATTNGRPADNIFRYNTFSN--NGRLMKIRDSDNIVFKDNIFDGPTDVELYDSSNLEIVGNTHLFSELSVRLDGSDMFPSDVVFEIDENTNV 485 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13816.2670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13816.2670.1 >prot_H-elongata_contig13816.2670.1 ID=prot_H-elongata_contig13816.2670.1|Name=mRNA_H-elongata_contig13816.2670.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp MDTVIVSYDESEGGPDERLEDRAYIAALSAESDDQTKVWESRMDVFNSEIback to top mRNA from alignment at H-elongata_contig13816:3477..8224+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13816.2670.1 ID=mRNA_H-elongata_contig13816.2670.1|Name=mRNA_H-elongata_contig13816.2670.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4748bp|location=Sequence derived from alignment at H-elongata_contig13816:3477..8224+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13816:3477..8224+ >mRNA_H-elongata_contig13816.2670.1 ID=mRNA_H-elongata_contig13816.2670.1|Name=mRNA_H-elongata_contig13816.2670.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2088bp|location=Sequence derived from alignment at H-elongata_contig13816:3477..8224+ (Himanthalia elongata Himel1 dioecious)back to top |