mRNA_H-elongata_contig13772.2650.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 306 bits (783), Expect = 7.790e-84 Identity = 254/895 (28.38%), Postives = 412/895 (46.03%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEITDGNTLPVDGFGRIKIDLDQPGHTTKMVKMDDVAYVPGISRNLRST-----LKAVEQWKKPLIYY-RDKAVLG-------------FPGSE-----------SLVHRMLAHP-----SEDITRKTAEIMGIGTTGQWGA-CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLL--------VMTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALPAL-----RKLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEAN----------VEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYR--KIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV---DGEAKVVVV-VHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSGVP--TLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2460
DSGAT HM+ + + Y + V + D T+ G G + D T+ + + +V Y+P + +NL S L A+ Q+ R+ +L PG E +L H H S+ I AE M G+ + CE+C K R PK T RAS + DVCGPM S + F+DDY+++ V F+K K + ++ Y +K +R+DNGG++ + F+ L I H+ T P P+ NG AER + L E A ++M +P+ + W +A+ A ++S T S + +PFE F + P +L+ FG + Y H+ K + K KC+F+G +P GT L + +R ++ + + F K+EQ + S + P + ++ N PIL + + + V F+ +E N E+ C D T DI EPRN +A + W+KA ++E ++E+ ++ V P DK ++G++ ++K K + VEK+K RLVAQG+ EG+ Y E +SP SI LLA A D E+ D AFL+ D+ +E+Y++ PE YR + P + +L K +YGL Q+ RCWN+ S + + G++Q AD C++ K V +G+ V++ +HVDDIL + D ++ + KFK++D+G+ S+ +G I R+R +R L I+Q Y+E ++++F ++ K + P G LS + P N E Y++ +G L + T TRPD+A+AV ++++ H K V
Sbjct: 304 DSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLSVQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGISKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPK-EFWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKF-KYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHE--------YQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGV 1172
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 293 bits (749), Expect = 2.090e-79 Identity = 224/721 (31.07%), Postives = 341/721 (47.30%), Query Frame = 1
Query: 400 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSGIIFV----DDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALP---ALRKLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALACDD------------------GGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGA--MGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2469
CE C K + ERAS + DVCGPM + G +V DD +R+ + +K KS+T ++ ++ IKC+R+D GG++ EF L + I + TPP TPQ NGV+ER + L + ++M D ++ L T A F KSV T+ P+ELWF K P L+ +G Y + + K+ PK EKCVF+G P+ T+ + R EG+ S+LE L + RK+ +D P L + + +E P EE N +D A D G + LD EP N +AM P+ + W +A ++E+ M E+ + V P ++ I K ++K+K N V YK RLVA+GF ++GV Y E +SP S+ ++LA AA D E+ D + AFL ++ EELY+ PE + GA + +L + IYGLVQA R WN +F + A GF Q + C+++KV G + +V++VDDIL D ++ A L + F +KD+G+A+Y +G I R+R R + ++Q Y++ +++KF + KKG +P G+ LSK P ++E+ PY AVG+L++ TRPDI + V R+ N G H AV ++
Sbjct: 471 CEPCLMGKMTKTPFSGIM-ERASDLLEIIHTDVCGPMNVEARGGYRYVLTLTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLSFWGYALETTA-FTLNRAPSKSVETT------PYELWFSKKPKLSFLKVWGCDAYVK-KLQPEKLEPKAEKCVFIGYPKE----TIGYTFYL----------------------RSEGKTFVAKNGSFLEKEFLSKEVSGRKVELDEVITPPLEQESSA------TQEVVPVVPTPTEEEVNDDDHEASDQVTTEPRRSTRVRSAPEWYGNPVMEIMLLDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKV-SGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGF-LPVLQGM-RLSKTQSPTTAADREKMSSVPYASAVGSLMYAMLCTRPDINLVISLVGRYQSNPGAEHWTAVKNI 1147
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 292 bits (747), Expect = 3.990e-79 Identity = 245/885 (27.68%), Postives = 412/885 (46.55%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEITDGNTLPVDGFGRIKIDLDQPGHTTKMVKMDDVAYVPGISRNL------------------------RSTLKAVEQWKKPLIYYR----DKAVLGFPGSE-SLVHRMLAHPSEDITRKTAE---IMGIGTTGQW---GACEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--MTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLE-GPALPALR-----KLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALA------CDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV---DGEAK-VVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSG--VPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2460
DSGAT HM+ ++ +S Y + V + D ++ G G +I D H + + DV Y+P + +NL S L AV + + L + D A + L H H D K + + G+ CE C K R P +RA+ + DVCGPM S+ G + F+DDYTR+ V F+K K + A + T S+K +RTDNGG++ EF+ L + I H+ T P P NGV+ER + L E ++M + + W +A+ A + ++S TTS + +P+E F + P +LR FG +A + K K K VF+G +P GT L TR+ + +++ + K+G +G Y+ +P + + I+G+ ++ H A E N+ D DD +A + T DI EP + ++A +W++A ++E ++++ ++ V PK K ++G++ ++K K + VE++K RLVAQG+ +G+ Y E +SP SI LLA A D E+ D + AFL+ ++DE ++++ PE Y ++ P + +LN+ IYGL QA RCWN+ + + + G+ + NAD C++ K + +G+ V++ ++VDDIL + + + + L ++F+++DMG+ SY +G + RNR+AR L INQ Y+E ++++F ++ K + P G +LS+ D P + E Y+ A+G L + TRPD+A+AV ++++ G H + V
Sbjct: 292 DSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADLGDHVQN-ISLRDVLYLPDLEKNLLSVRAMVKLGANVRFEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKEI-TPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIR---SRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMR-ETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVRE--------YQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGV 1153
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1) HSP 1 Score: 286 bits (733), Expect = 1.320e-78 Identity = 221/721 (30.65%), Postives = 344/721 (47.71%), Query Frame = 1
Query: 400 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSGIIFV----DDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALP---ALRKLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALACDDGGQMAMHAT------------------LDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2469
CE C K + T ERA+ + DVCGPM + G +V DD +R+ V +K KS+T + ++ IK +R+D GG++ EF L + I + TPP TPQ NGV+ER + L + ++M ++ ++P + W A+ A +++ + S + +P+ELWF K P L+ +G Y + + K+ PK EKCVF+G P+ T+ + R EG+ S+LE L + RK+ +D +LP + NV E P EE N +D D +T LD EP N +AM P+ D W +A ++E+ M E+ + P D+ I K ++K+K + V YK RLVA+G+ V+GV Y E +SP S+ ++LA AA D E+ D + AFL + EELY+ PE + K + +L + IYGLVQA R WN +F + A GF Q + CV++KV G + ++++VDDIL D ++ A L + F +KD+G+A+Y +G I R+R R + ++Q Y++ +++KF + KKG +P GV LS A P E++E+ PY A+G++++ TRPD+ AV V R+ N G H AV ++
Sbjct: 143 CEPCLMGKMTKTPFSGTM-ERATNLLEIIHTDVCGPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMM----SLTDLPLS-FWGYALETATFTLNRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCDAYVK-KLQPEKLEPKSEKCVFIGYPKE----TIGYTFYL----------------------RSEGKIFVAKNGSFLEKEFLSKEVSGRKVELDE----VLPLEPENGATQENVPEVP----APTREEVNDDDHETSDQVATELRRSTRTRSAPEWYGNPVLEIMLLDNGEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMDQSKKGF-LPVLQGV-QLSTAQCPTTAEDREKMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNI 817
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A446P200_TRITD (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A446P200_TRITD) HSP 1 Score: 281 bits (718), Expect = 2.440e-75 Identity = 220/725 (30.34%), Postives = 345/725 (47.59%), Query Frame = 1
Query: 394 GACEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALP---ALRKLTIDG-NAP-PILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALACDDGGQMAMHAT------------------LDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGA--MGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2469
G CE C K + T ERA+ + DVCGPM + +G + F DD +R+ + +K KS+T ++ + IK +R D GG++ EF L I + TPP TPQ NGV+ER + L + ++ + ++ N+P + W A+ A +++ + S + +P+ELWF K P L+ +G Y + + K+ PK EKCVF+G P+ +T F + EG+ ++LE L + RK+ +D P P+L S T + P EEAN D D +T LD EP N +AM SP+ W +A ++EM M E+ + V P D+ I K ++K+K + V YK RLVA+GF V+GV Y E + P S+ ++LA AA D E+ D + AFL ++EELY+ E + GA + +L + IYGLVQA R WN +F S + A GF Q + C+++KV G + ++++VDDIL D +D L + F +KD+G+A+Y +G I R+R R + ++Q YV+ +++KF++ KKG + GV LS+ P E++E+ + PY A+G++++ TRPD+ A+ R+ N G H AV ++
Sbjct: 470 GTCETCLMGKMTKTLFSGTM-ERATDLLEIIHTDVCGPMNVEARAGYRYFLTFTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENHRNKKIKFLRPDRGGEYLSYEFGVHLKNCGIVSQLTPPGTPQRNGVSERRNRTLLD----MVRSMISLTNLPLS-FWGYALETAAFTLNRAPSKSVE--MTPYELWFGKKPKLSFLKVWGCDAYVK-KLQPDKLEPKSEKCVFIGYPK--------------------ETIGYTFY------HKSEGKTFVAKFGNFLEKEFLSKEVSGRKVELDEVTVPSPLLKSSTSQKTVSVTP--------TPVNEEANDNDHETSDQDTTEPRRSTRVRSAPEWYGNPVLEVMLLDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFLPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQLEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAFGFIQTFGEACIYKKV-SGSSVAFLILYVDDILLIGNDIKFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYVDKILKKFKMDQAKKGF-LHVLQGV-KLSQTQCPTTAEDREKMKDVPYASAIGSIMYAMLCTRPDVCLAISLAGRYQSNPGVDHWTAVKNI 1148
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A6A3YME3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YME3_9STRA) HSP 1 Score: 279 bits (714), Expect = 5.450e-75 Identity = 261/903 (28.90%), Postives = 408/903 (45.18%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTV-EITDGNTLPVDGFGRIKIDLDQPGHTTKMVKMDDVAYVPGISRNLRSTLKAVEQW-------KKPLIYYRDKAV-----------LGFPGSES---------LVHRMLAHPSEDITRKTAEIMGI-GTTGQWGA-CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVC----GPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGEFQYEL-DRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEE--LDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVL----LVMTRQIVERQT---------TQEAF--LKHEQEQQRKEGEAGSVSGSSYLEGPALPALRKLTIDGNAPP-ILPSRTRSRRPHTNVEEAAIHCF------------LPAIE--EANVED------ALAC----DDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSGVPTLSKA-DEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAH 2448
DSGA+ HM +R S Y G +V L V G+G + + + GH+ ++++ +V +++NL S E+ KK ++ D+ V L SE L HR L H S + + G + GA CE C AK R T +E + + R VC GP+ +S SG + F+ +R+ + ++ KS A + + T L+IK +R+DNGG++ L D + I HE T P P+ NG+AER + L E +++E LD W +AM A D+ + TS SPFEL F + P DH+R FG YAR + K + G +CVF+G + + + +V++R + ++ T+E F L + E + EAG+ S+ P P + + P +P+R S EE + P + E N++D L C DD G+ A+ T D + M+S D+W +A E+EM+ + + V P +K IG K +++ K N + K+K RLVA+GF G+ Y E ++P S+ A AA +D E + D + AFL D +EE+Y++ P+ + + P L + +YG QA R WNNK + A GF + +AD CV+ + E + VV +VDD++ +K KA ++ L+ +F +K++G+ Y +G I R R+ + + +NQ Y++ + KF V K + PA S + + DEP K+PYRE VGAL++ AT T PDIA AV VA+FCE +H
Sbjct: 198 DSGASAHMCKSRGAFSEYTAVKNGRSVLSAKTSADLKVLGYGTVTLRV-WTGHSWINARLENTLHVQDLNKNLFSLTAVTERGMIVTMDSKKCIVKRGDEVVATGRKQGKLMYLNTEASEECHVAEDNSDLWHRRLGHVSFSTLNTMIKDGKLNGAPKESGAVCEVCATAKQSRKPFSSTKEELEARESTRTDTSVCSDVLGPITPVSKSGYKYIVTFILMKSRYLTIYPLRNKSAVCGAFRKFLKETRTNAGLNIKVLRSDNGGEYWSRSMEALCDDKLIKHEFTVPHNPEQNGMAERVNRTLVEMTRCMLKESELDKAY-------WCEAMMTAVDIRNVLPNTSNPH-SSPFELVFKRKPRLDHMRVFGTECYARVPKQKRKKLDDTGMRCVFLGYAKQRKAYRLLSVSDGSIVISRSVTFAESPAMRAPKGATEEVFDVLDEDNEVEDPNKEAGAQD--SFRTPPTRPRQEPAREEHDGPTHSVPTRGSSTPGRDGEEEWMVRLERTRRGVVRYEQEFPNVRRGEFNLDDYEAEYDLLYCLHAEDDDGERAV--TYD--------EVMKSKYKDEWLRAMESEMKSSEDHRTWTLVDMPSNKKPIGCKWVFRIKRDPNGDIVKFKARLVAKGFTMRPGIDYTETFAPVARKESVNTATAIAAEEDMEAENVDVDTAFLYGDAEEEIYMDQPDGFVDQDNPTKKCLLGQALYGTKQAARQWNNKLNQHLVAQGFRRSDADPCVYVRRSSSEYSIAVV-YVDDLMLFSKSKAHIESIKRALKDEFSIKELGELKYCLGIEIRRKREEKIIVMNQRAYIKRLAVKFGVDNCKDVHTPADSNSKLMKPSEDEPFV-------AKYPYRELVGALMYLATCTLPDIAHAVGEVAKFCERYNKSH 1071
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A0J7K725_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K725_LASNI) HSP 1 Score: 277 bits (708), Expect = 1.740e-74 Identity = 249/884 (28.17%), Postives = 414/884 (46.83%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEITDGNTLPVDGFGRIKIDLDQPGHTTKMVKMDDVAYVPGISRNLRS----------------TLKAVEQWKKPLIYY-----------------RDKAVLGFPGSESLVHRMLAHPS-----EDITRKTAEIMGIGTTGQWGACEACFQAKAKRYAVP-KTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEH-KMAPKGEKCVFMGIPRNFPTGT----VSVLLVMTRQIVERQTTQ-EAFLKHE----------QEQQRKEGEAGSVSGSSYLEGPALPALRKLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDR------FAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAH 2448
DSGA+ HM+H R +++ S V + + LP+ G G +KI+ G + + +V YV + RNL S + K +E KK ++ Y +A + G L H L H + E I + E + + + CE C K+Y +P +T+ R +V G+ + D+ GPM LS SG I+F DD + ++ V F+K KSD+ + IK +R+DNG +F FQ L R I HE T P TP+ N ER + + E A +++ D +P+ LW +A+ A V +++ TT +PFE+W + PT D++R FG+ Y +H K+ PKG+K + +G ++ V+ + ++R ++ +T + + F K+ +E + KEG E LP E+N+ +A D+P + +AM S + W+ A E E+ + ++ ++ V P DK I +K ++K K + +++++K RLVA+GF +EGV Y E Y+PT +I +LL+ + ++ ++ FD + AFL +++EE+Y+++P+E ++ + +L K +YGL QA RCWN KF + + GF Q AD CV+ + E V++V++VDD L AKD T+ + EL++ F++ + + YY+G I ++ K + I+ Y++ +++KF ++ K I IPA V L++ E EE + K PYREA+G L++ A TRPDI AV ++RF N H
Sbjct: 127 DSGASAHMTHHREFFWKFEETSKN-DVALANKQELPIKGIGTVKIEKLIDGKWYEST-ITNVLYVLNLKRNLFSEGVLTKKGMKIIKEQDSAKVIE--KKNIVAYAIRESNNLYAMLFRTIVNPEANVVSRGDLKLWHERLGHVNVKSLREMIKKNLVEGVKMSDVNNF-FCEGCQY--GKQYKLPFSSTERRKTVPGEFIYCDLGGPMNTLSESGAKYFILFKDDASAYRTVMFLKHKSDSFDCFKQYASLCKNKFGQMIKILRSDNGTEFNNAVFQEFLKRHGIQHETTAPYTPEQNARLERENRTVVESARSMLYTKD----LPK-NLWAEAINTAVYVLNRTPTTQVLN-STPFEIWHGRKPTLDYIRMFGSEAYVLTPKGKHTKLDPKGKKLILVGYDKDSTNNRLLDPVTKKITISRNVIFNETAEVKLFRKNTVLIQLDNQNLEEMENKEGNKDVQIKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETLR----LPKRYESNLVEA---------------DVPLTFD--EAMNSSDSKKWKAAIEEELDALNQNDTWELVPLPPDKRSISSKWVFKVKRYPDGRIQRHKARLVARGFAQIEGVDYSETYAPTTRYDTIQVLLSLSVSRGLKISQFDVKTAFLHGELEEEVYMDLPDEVKESTNRVCKLKKALYGLKQAPRCWNRKFNNFLQEFGFRQCQADKCVYNGEFE-EKTVLLVIYVDDGLILAKDYKTLTKVLNVLNLLNELKRVFEI-TVNEPGYYLGMEIKQDEKDGLIFIHGTSYIDRLLKKFNMEDAKTISIPADPHV-ILTRNSEA---EENNLEEKVPYREAIGTLMFAALTTRPDIMFAVNLLSRFQTNFNSNH 970
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A8J6L9T5_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9T5_TENMO) HSP 1 Score: 276 bits (706), Expect = 2.090e-73 Identity = 247/863 (28.62%), Postives = 395/863 (45.77%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEITDGNTLPVDGFGRIKIDLDQPGHTTKMVKMDDVAYVPGISRNLRSTLKAVEQWKKP------------------LIYYRDKA--------------------VLGFPGSESLVHRMLAHPSE-DITRKTAEIMGIGTTGQWGACEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIP-----RNFPTGTVSVLLVMTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALPALR--KLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCEN 2433
D+GAT H+++ + + S +V +G + G G ++I+ G K + + DV VP I +NL S L A ++ + LI RD+ V G L H H ++ + ++ + I CE C KA R +P T + + G+R DVCGP + S+SG ++F DDYT+F+ + F+K KS+ L +A+ T + IK + +DNG +F+ + + L + I T P TPQ NG +ER + + E A A+M NI P+ LW + + A + +++ ++ G SP+ELW+ K P HLR G+ Y K M PK K + +G R F L+ +R +V +E L+H + E ++ S + A R +LT D + S ++ E A + ++ D MH + EP +AM+S + D W++A + EM+ + E+ ++ V P+ K I K +YK K + ++K+K RLV +G+ G+ Y E +SP ++I LL+ AA + +L D AFL D+ E +Y++ PE + G + RL K +YGL QA RCWN KF + + +GF + AD C+F + G K+ V++VDD L A D+ + +F +L +KFK+ AS+++G I R ++++Q Y E ++E+F + K T V + RN E FPYR+AVGAL++ TRPDIA A+ V+R EN
Sbjct: 303 DNGATSHITNDKNSFRTLEPFSTTHSVTTANGEKIEAIGKGTVEIEAAVGGRWNK-ITLTDVWCVPSIQKNLFSVLAAQDKRQNSEFISTTETCNFKVDGLVQLIGVRDRFGGLYKLAVRSTKTSSLDEVNVTGTNNLLQLYHERFGHQNKRHVKSLLSKELNIKVEMDSELCEGCMYGKAHR--LPFGTRTKTTNAGERVHTDVCGPFQE-SMSGFKYFVLFKDDYTKFRTIYFLKEKSEVAEKLSQFLAETKTVGHV-IKELLSDNGKEFDNKDVRSMLRKEGIIQRLTMPYTPQQNGCSERENRTVVETARAIMHAHGNI---PQT-LWAEIVRSANYILNRTGPSNVPGT-SPYELWYGKKPGLKHLRVIGSTCYVHVPKQTRKKMDPKATKGILIGYDHDDGYRIFDKEECK--LIRSRDVV----FEEKTLEHTKSVIIPEDDSTSKQ--------EIQADRDDELTDDXXXXXETEDTSISGTSESDCEHNADRTTRCLRNRSTLKAPEKLQD---YVMHLATSLEEPETYGEAMKSDQKDYWKEAMDREMKALQENETWELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQT-GSTKMFFVLYVDDGLIAANDEQELQQFIDDLGRKFKI-TAKPASFFLGLEINREEDGS-VRVSQTHYTEKLLERFNMS-NCKAVTTPIVKDNDTEESSRNSE-------FPYRQAVGALMFLMCGTRPDIAYALSVVSRNLEN 1127
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A8J6HGL1_TENMO (Integrase catalytic domain-containing protein n=2 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HGL1_TENMO) HSP 1 Score: 275 bits (702), Expect = 5.600e-73 Identity = 246/863 (28.51%), Postives = 394/863 (45.65%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEITDGNTLPVDGFGRIKIDLDQPGHTTKMVKMDDVAYVPGISRNLRSTLKAVEQWKKP------------------LIYYRDKA--------------------VLGFPGSESLVHRMLAHPSE-DITRKTAEIMGIGTTGQWGACEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIP-----RNFPTGTVSVLLVMTRQIVERQTTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALPALR--KLTIDGNAPPILPSRTRSRRPHTNVEEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCEN 2433
D+GAT H+++ + + S V +G + G G ++I+ G K + + DV VP I +NL S L A ++ + LI RD+ V G L H H ++ + ++ + I CE C KA R +P T + + G+R DVCGP + S+SG ++F DDYT+F+ + F+K KS+ L +A+ T + IK + +DNG +F+ + + L + I T P TPQ NG +ER + + E A A+M NI P+ LW + + A + +++ ++ G SP+ELW+ K P HLR G+ Y K M PK K + +G R F L+ +R +V +E L+H + E ++ S + A R +LT D + S ++ E A + ++ D MH + EP +AM+S + D W++A + EM+ + E+ ++ V P+ K I K +YK K + ++K+K RLV +G+ G+ Y E +SP ++I LL+ AA + +L D AFL D+ E +Y++ PE + G + RL K +YGL QA RCWN KF + + +GF + AD C+F + G K+ V++V+D L A D+ + +F +L +KFK+ AS+++G I R ++++Q Y E ++E+F + K T V + RN E FPYR+AVGAL++ TRPDIA A+ V+R EN
Sbjct: 629 DNGATSHITNDKNSFRTLEPFSTTHLVTTANGEKIEAIGKGTVEIEAAVGGRWNK-ITLTDVWCVPSIQKNLFSVLAAQDKRQNSEFISTTETCNFKVDGLVQLIGVRDRFGGLYKLAVRSTKTSSLDEVNVTGTNNLLQLYHERFGHQNKRHVKSLLSKELNIKVEMDSELCEGCMYGKAHR--LPFGTRTKTTKAGERVHTDVCGPFQE-SMSGFKYFVLFKDDYTKFRTIYFLKEKSEVAEKLSQFLAETKTVGHV-IKELLSDNGKEFDNKDVRSMLQKEGIIQRLTMPYTPQQNGCSERENRTVVETARAIMHAHGNI---PQT-LWAEIVRSANYILNRTGPSNVPGT-SPYELWYGKKPGLKHLRVIGSTCYVHVPKQTRKKMDPKATKGILIGYDHDDGYRIFDKEECK--LIRSRDVV----FEEKTLEHTKSVIIPEDDSTSKQ--------EIQADRDDELTDDXXXXXETEDTSISGTSESDCEHNADRTTRCLRNRSTLKAPEKLQD---YVMHLATSLEEPETYGEAMKSDQKDYWKEAMDREMKALQENETWELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQT-GSTKMFFVLYVNDGLIAANDEQELQQFIDDLGRKFKI-TAKPASFFLGLEINREEDGS-VRVSQTHYTEKLLERFNMS-NCKAVTTPIVKDNDTEESSRNSE-------FPYRQAVGALMFLMCGTRPDIAYALSVVSRNLEN 1453
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 273 bits (698), Expect = 5.840e-73 Identity = 210/726 (28.93%), Postives = 347/726 (47.80%), Query Frame = 1
Query: 400 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQ------------------TTQEAFLKHEQEQQRKEGEAGSVSGSSYLEGPALPALRKLTIDGNAPPILPSRTRSRRPHTNVEEAA-----IHCFLPAIEEAN-VEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIP--GAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIK--IPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2460
CE+C + K + T ERAS DVCGPMK + G I F DD +R+ + +K KS++ ++ SIK +R+D GG++ E F L I + TPP TPQ+NGV+ER + L + ++M D +N LW A+ A + +K T + +P+E+W + P H++ +G Y + + K+ + +KC F+G P+ + V + +ER+ T E E E + ++ + + L+ P + A + +E+ IH L A+ D L ++ + +P+N +AM+ + + W++A E+E+ M + + V KD IG K +YK+K+G + KVE YK RLVA+G+ EG+ Y E +SP SI +LLA AA D E+ D + AFL ++ E++Y+ PE Y + + +L + IYGL QA R WN F + F + + CV+++ G + +V++VDDIL D M L ++F +KD+G+A+Y +G I R+R R L ++Q +Y++++++++ ++ + +P +GV TLS+ D P+ PEE+E + PY AVGA+++T T TRPD+A A+ +R+ N G H K V
Sbjct: 329 CESCLKGKMTKSPFIGT-GERASELLGLVHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVN-----LWGYALEAAAYLLNKIPTKTVS--TTPYEIWKGRKPNLKHIKVWGCPAYVK-KLQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLAEGSHGKEIELDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQSPTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEDVYMTQPEGYTSMSDHNKVCKLRRSIYGLKQASRSWNIHFNKTIEKFDFVKCEEEPCVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVV 1043 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13772.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13772.2650.1 >prot_H-elongata_contig13772.2650.1 ID=prot_H-elongata_contig13772.2650.1|Name=mRNA_H-elongata_contig13772.2650.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=312bp MSHTRAGMSAYKKASPGMTVEITDGNTLPVDGFGRIKIDLDQPGHTTKMVback to top mRNA from alignment at H-elongata_contig13772:2058..5269- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13772.2650.1 ID=mRNA_H-elongata_contig13772.2650.1|Name=mRNA_H-elongata_contig13772.2650.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3212bp|location=Sequence derived from alignment at H-elongata_contig13772:2058..5269- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13772:2058..5269- >mRNA_H-elongata_contig13772.2650.1 ID=mRNA_H-elongata_contig13772.2650.1|Name=mRNA_H-elongata_contig13772.2650.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1872bp|location=Sequence derived from alignment at H-elongata_contig13772:2058..5269- (Himanthalia elongata Himel1 dioecious)back to top |