mRNA_H-elongata_contig137342.2626.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A6H5KXU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXU2_9PHAE) HSP 1 Score: 314 bits (805), Expect = 2.290e-95 Identity = 155/194 (79.90%), Postives = 167/194 (86.08%), Query Frame = 3
Query: 156 KVGTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGTRVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNSINETLVAQGVARLEKTSKIFTTCQPAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDEDDF 737
KVGTSGATM PRRGT CAALFDDG GPAWYRA+V+GSTP+G RV YVDHGN ATVK+S LRPLDSSYFAF PQARECV+AF RVPSLEEEFGRDAAM LN LGWGK+LLGRALG+DADGRLMMALYES DS S+NETLVAQGVAR+ + QPAKEMV +LRESQE AHKSR +WRYGDC SDDEDDF
Sbjct: 748 KVGTSGATMEPRRGTLCAALFDDGNGPAWYRAKVLGSTPVGMRVLYVDHGNTATVKSSSLRPLDSSYFAFRPQARECVMAFMRVPSLEEEFGRDAAMGLNALGWGKELLGRALGRDADGRLMMALYESEDSESLNETLVAQGVARVASNADKLAASQPAKEMVARLRESQEHAHKSRANMWRYGDCQSDDEDDF 941
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A835YK22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK22_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.980e-54 Identity = 112/206 (54.37%), Postives = 140/206 (67.96%), Query Frame = 3
Query: 156 KVGTSGATMAPRRGTQCAALFD--DGKGPAWYRAQVIGSTPLGTRV--RYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDAD-GRLMMALYESNDSNSINETLVAQGVARLEKTS-KIFTTCQP--------AKEMVDKLRESQEIAHKSRTALWRYGDCCSDDED 731
+VGT GA M RRGT CAALFD DG G W+RA++ + GT V RY+DHGNCATV A +LRPLD +YF PP A+ECVLA+TRVPSL EE+G DAA L ++ WGK+L R LG+DA G+ M+ALYE + SI E +V +G+ARL K + K Q A E+V +L+E+QE AHK R A+WRYGDC SDDE+
Sbjct: 820 QVGTGGAPMEHRRGTTCAALFDAGDGAGECWFRARIEAAARGGTAVTVRYIDHGNCATVPAGKLRPLDRTYFDLPPLAKECVLAYTRVPSLTEEWGGDAAGLLQEMAWGKELKARMLGRDATTGKPMVALYEEGEQ-SIQEIMVGEGLARLAKRAEKAVAAAQQSGAPAAXAAAELVARLKEAQEAAHKGRVAMWRYGDCTSDDEN 1024
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A2P4YKI6_9STRA (Nuclease n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKI6_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.460e-39 Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 3
Query: 162 GTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGT-RVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNSINETLVAQGVARLEKTS--KIFTTCQPAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDE 728
G +G RR CAALFDDG GPAW RA+V P G+ RVR++D+GN TV A++LRPLD+ FPPQA+E V A+ + + EFG DAAM + ++ WGK L R G D + R+ ++LY D S+ ETL+ G+ R ++ + + QP +VD L +QE A K R LW+YGD SDDE
Sbjct: 9 GLAGKAFEVRRNAVCAALFDDGNGPAWNRAKVEYVHPDGSARVRFLDYGNDTTVTANRLRPLDADVLQFPPQAKEAVFAWIKPLAATAEFGTDAAMRIGEVAWGKTLSCRIHGTDDNNRMQVSLYLP-DGKSVAETLMEAGLLRTDRKALRHVLPYQQP---VVDGLINAQETAKKQRRCLWQYGDIESDDE 196
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A662WVM6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVM6_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.040e-37 Identity = 85/190 (44.74%), Postives = 114/190 (60.00%), Query Frame = 3
Query: 162 GTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGT-RVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNSINETLVAQGVARLEKTSKIFTTCQPAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDE 728
G +G RR CAALF+DG PAW RA+V P G+ RVR++D+GN ATV ++LRPLD+ FPPQA+EC LAF + EEFG DAA+ L ++ WG+ L R G D GR+ +++Y D S+ E L+ G+ R ++ + F K +VD L +QE A K R LW+YGD SDDE
Sbjct: 184 GLAGKAFEVRRNAVCAALFEDGGEPAWNRAKVEFVHPDGSARVRFLDYGNQATVGPNRLRPLDADVLQFPPQAKECTLAFIKSLPATEEFGSDAAIRLGEVAWGQNLSCRVHGTDDHGRMQVSIYLP-DGKSVGENLLEGGLLRTDRKALRFVLPHQ-KPIVDGLVNAQETAKKQRRCLWQYGDIESDDE 371
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A3F2RSG8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSG8_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.300e-36 Identity = 88/191 (46.07%), Postives = 116/191 (60.73%), Query Frame = 3
Query: 162 GTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGT-RVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNSINETLVAQGVARLEKTSKIFTTCQP-AKEMVDKLRESQEIAHKSRTALWRYGDCCSDDE 728
G +G T RR CAALFDDG GPAW RA+V P G+ RVR++D+GN TV ++LRPLD+ FPPQA+E AF + + EEFG DAAM + ++ WGK L R D GRL ++LY D S++E+LV G+ R ++ + F QP K +VD L +Q+ A R LW+YGD SDDE
Sbjct: 687 GLAGKTFEVRRNAVCAALFDDGSGPAWNRAKVEYVHPDGSARVRFLDYGNETTVTPNRLRPLDADVLQFPPQAKEAAFAFIKPLAATEEFGSDAAMRIGEVAWGKTLSCRVHSTDDHGRLQVSLYLP-DGKSVSESLVEAGLLRTDRKALRFV--QPYQKPVVDGLVNAQDTAKAQRRCLWQYGDIESDDE 874
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A7S1C8D4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8D4_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.030e-33 Identity = 77/198 (38.89%), Postives = 115/198 (58.08%), Query Frame = 3
Query: 153 KKVGTSGATMAPRRGTQCAALFDDGKGPAWYRAQV---IGSTPLGT--RVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNSINETLVAQGVARLEKTSKIFTTCQPAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDED 731
++VGT+GA P++G AALFDDG GPAWYRA+V G G V YVD+GN V ++LRPLD+ A PP ARECV AF RVP+L E+G +AA ++ +G+++L + +D ++ L++ S +E L+++G+AR+ K K +V KL ++QE A ++RYGD D++
Sbjct: 183 EEVGTAGAPCEPKKGALLAALFDDGSGPAWYRARVNAVTGDAAAGQTYEVTYVDYGNKDAVPIARLRPLDADLAAIPPLARECVTAFLRVPALGAEYGNEAAGCFHETVFGRRVLSKTHYRDESNNAVVTLFDEESDLSASEVLLSEGLARVSKRDTRRLRRGDDKALVAKLLKAQEEAKAGHRNMFRYGDPGDSDDE 380
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: W7TNM8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNM8_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.570e-33 Identity = 82/221 (37.10%), Postives = 127/221 (57.47%), Query Frame = 3
Query: 120 KTSPCLVALGLKKVGTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPL----GTRVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNS-------INETLVAQGVARLEKT-----SKIFTTCQPAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDEDD 734
K + ALG + + + PR+G AALFDDG GP WYRA+V + G V ++D+GN A V SQ+R LD+S+ A P QA+ LAF R P L+++FG +AA++ + L +GK L R G + G L+++L E + +S N+ +V +G+ARL K SK+ + A +V++++E+QE+A + R +WRYGD D++D
Sbjct: 712 KVGEKMKALGAEGRSENAISFEPRKGNIVAALFDDGSGPLWYRARVEDKLSMSNGGGFMVSFIDYGNKAIVGRSQVRTLDASFTAMPAQAKRAKLAFLRAPGLKDDFGHEAAVAFSRLAYGKVLRARVFGLER-GTLLVSLQEKGEDSSPATSMKTFNQLMVEEGLARLSKQADGVISKLGKSS--AVNLVEEMKEAQELARRGRIGMWRYGDVADSDDED 929
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A067C0V4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0V4_SAPPC) HSP 1 Score: 141 bits (356), Expect = 4.580e-33 Identity = 79/192 (41.15%), Postives = 111/192 (57.81%), Query Frame = 3
Query: 159 VGTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGTRVRYVDHGNCATVKASQLRPLDSSYFAFPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESNDSNSINETLVAQGVARLEKTSKIFTTCQP-AKEMVDKLRESQEIAHKSRTALWRYGDCCSDDED 731
VGT G T ++G CAALFDDG+GPAW RA++ + G +V +VDHGN V ++LRPLD + +PPQA+ CVL F + E+ DAA ND WGK L G D +GR M+ L + S+ E L+ QG+A++++ + +P K +VDKL + + A + R LW YGD SD +D
Sbjct: 677 VGTDGKTFEMKKGVLCAALFDDGQGPAWNRARIESLSVRGVQVFFVDHGNTEFVPTTRLRPLDPALAQYPPQAKPCVLGFIKPFGDGAEYAEDAAHVFNDTAWGKTLTAILHGHDGNGRQMVTLQLQD--KSVAEILLEQGIAKVDRAA--IKRAEPYQKVVVDKLLAALDHAKRRRLCLWHYGDAESDLDD 864
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: A0A7S2H067_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H067_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.970e-31 Identity = 82/205 (40.00%), Postives = 114/205 (55.61%), Query Frame = 3
Query: 153 KKVGTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGTRVRYVDHGNCATVKAS-QLRPLDSSYFA--FPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYE-SNDSNSINETLVAQGVARLEKTSKIFTTCQ------PAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDEDDF 737
+K GT GA + G AALFD +WYRA++ V Y+DHGN VKAS LRPLD PP A+E L T V S E+++G DAA LN L WGK+L R+ + +G++ + L + S+D SINE +VA G+AR+ K +++ + K++ KL +QE A SR +WRYGD DD++DF
Sbjct: 14 EKNGTKGAPCDIKVGKVVAALFDG----SWYRAKITEKKDKEVEVLYIDHGNLDVVKASTHLRPLDDELGTDKIPPVAKEAQLICTIVRSTEDDYGFDAARELNSLAWGKELTARSH-CELEGKMHVTLIDPSDDKTSINEKMVAAGLARVPKPAEVNHLAKRLRSGGDVKKLAAKLTTAQEGARTSRAGMWRYGDIGDDDDEDF 213
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Match: K0R2A1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2A1_THAOC) HSP 1 Score: 134 bits (338), Expect = 1.090e-30 Identity = 83/198 (41.92%), Postives = 121/198 (61.11%), Query Frame = 3
Query: 162 GTSGATMAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLG-TRVRYVDHGNCATVK-ASQLRPLDSSYFA--FPPQARECVLAFTRVPSLEEEFGRDAAMSLNDLGWGKKLLGRALGKDADGRLMMALYESN-DSNSINETLVAQGVARLEKTSKIFTTCQ---PAKEMVDKLRESQEIAHKSRTALWRYGDCCSDDED 731
GTSGA + G AALF DG +WYRA++I T G +V +VDHGN +TV ASQLRPLD + P A+E VLA T+V SLEEE G DAA L + WGK L R G ++DG+L++ L+E + +++SINE LV +G+AR+ +++ + ++ +L+ +Q+ A K R +W YG+ +DE+
Sbjct: 734 GTSGAPCEIKPGKVVAALFKDGSTSSWYRAKIIEQTDKGKVKVLFVDHGNVSTVSPASQLRPLDMALGTDQIPAVAKEAVLAMTKVRSLEEEDGLDAARCLQGIAWGKDLKARLHG-ESDGQLLVTLFEGDAETSSINEKLVIEGLARVPNRKEMYDAGRGNSSLNKLKKELQSAQDKARKMRKGIWIYGEIPEEDEE 930 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137342.2626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137342.2626.1 >prot_H-elongata_contig137342.2626.1 ID=prot_H-elongata_contig137342.2626.1|Name=mRNA_H-elongata_contig137342.2626.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp MAPRRGTQCAALFDDGKGPAWYRAQVIGSTPLGTRVRYVDHGNCATVKASback to top mRNA from alignment at H-elongata_contig137342:2..1750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137342.2626.1 ID=mRNA_H-elongata_contig137342.2626.1|Name=mRNA_H-elongata_contig137342.2626.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1749bp|location=Sequence derived from alignment at H-elongata_contig137342:2..1750- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137342:2..1750- >mRNA_H-elongata_contig137342.2626.1 ID=mRNA_H-elongata_contig137342.2626.1|Name=mRNA_H-elongata_contig137342.2626.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at H-elongata_contig137342:2..1750- (Himanthalia elongata Himel1 dioecious)back to top |