mRNA_H-elongata_contig137000.2608.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: D8LCY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY1_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 6.770e-19 Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 4 QWGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTRR 144
QWGLDLLWRLLRWDP+ RIS ++ALEHAYF GPYRSRRDG+ H T+R
Sbjct: 592 QWGLDLLWRLLRWDPMSRISASDALEHAYFVGPYRSRRDGTLHATQR 638
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: A0A6H5JKE5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKE5_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 2.360e-18 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 1
Query: 4 QWGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPT 138
QWGLDLLWRLLRWDP+ RIS ++ALEHAYF GPYRSRRDG+ H T
Sbjct: 672 QWGLDLLWRLLRWDPMSRISASDALEHAYFVGPYRSRRDGTLHAT 716
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: A0A8K1CDS6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDS6_PYTOL) HSP 1 Score: 65.1 bits (157), Expect = 4.900e-11 Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 4 QWGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTR 141
+WGLDL+W+LL+W+P +RIS EAL+HA+F GPY S DG T+
Sbjct: 500 RWGLDLMWKLLQWNPSQRISAREALQHAFFQGPYMSTEDGRRFATK 545
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: A0A6A3FDD1_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FDD1_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.900e-11 Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTR 141
WGLDL+WRLL+W P ERIS +ALEHAYF GPY + G TR
Sbjct: 572 WGLDLMWRLLQWHPSERISAEDALEHAYFRGPYVCKESGRRFATR 616
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: F0X0Q1_9STRA (Protein phosphatase 1Llike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X0Q1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.710e-10 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTRR 144
WGLDL+W+LL+WDP +RIS EAL HA+F GPY G A T++
Sbjct: 204 WGLDLIWKLLQWDPKQRISAKEALRHAFFVGPYICNETGRAFATKK 249
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: M4C3Z6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3Z6_HYAAE) HSP 1 Score: 63.2 bits (152), Expect = 2.340e-10 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTR 141
WGLDL+W+LL+W+P ERI EAL+HAYF GPY ++ G TR
Sbjct: 507 WGLDLMWKLLQWNPSERIPAAEALQHAYFQGPYVCQQSGRQFATR 551
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: T0RAV5_SAPDV (CMGC protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RAV5_SAPDV) HSP 1 Score: 62.8 bits (151), Expect = 3.200e-10 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTRR 144
WGL+LL++LL+WDP +RIS T+ALEHAYF GPY G TRR
Sbjct: 454 WGLNLLYKLLQWDPAKRISATDALEHAYFQGPYVCPETGREFSTRR 499
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: A0A067BCU9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BCU9_SAPPC) HSP 1 Score: 60.8 bits (146), Expect = 1.520e-9 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTRR 144
WGL+LL++LL+WDP +RIS +ALEHAYF GPY G TRR
Sbjct: 92 WGLNLLYKLLQWDPAKRISAIDALEHAYFRGPYVCPESGREFSTRR 137
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: A0A0A7CPJ9_9STRA (Secreted protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CPJ9_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.850e-9 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTR 141
WGL+LL++LL+WDP +RIS +AL+HAYF GPY G A TR
Sbjct: 471 WGLNLLYKLLQWDPAKRISAADALQHAYFRGPYVCGETGRAFATR 515
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Match: A0A3R7GEL2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GEL2_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.900e-9 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 1
Query: 7 WGLDLLWRLLRWDPLERISVTEALEHAYFAGPY 105
WGLDL+WRLL+W P +RI+ +AL+HAYF GPY
Sbjct: 548 WGLDLMWRLLQWHPAQRITAEQALQHAYFRGPY 580 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137000.2608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137000.2608.1 >prot_H-elongata_contig137000.2608.1 ID=prot_H-elongata_contig137000.2608.1|Name=mRNA_H-elongata_contig137000.2608.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp MQWGLDLLWRLLRWDPLERISVTEALEHAYFAGPYRSRRDGSAHPTRR*back to top mRNA from alignment at H-elongata_contig137000:1511..1657- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137000.2608.1 ID=mRNA_H-elongata_contig137000.2608.1|Name=mRNA_H-elongata_contig137000.2608.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=147bp|location=Sequence derived from alignment at H-elongata_contig137000:1511..1657- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137000:1511..1657- >mRNA_H-elongata_contig137000.2608.1 ID=mRNA_H-elongata_contig137000.2608.1|Name=mRNA_H-elongata_contig137000.2608.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at H-elongata_contig137000:1511..1657- (Himanthalia elongata Himel1 dioecious)back to top |