mRNA_H-elongata_contig13680.2592.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13680.2592.1
Unique NamemRNA_H-elongata_contig13680.2592.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A6H5JEL3_9PHAE (Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEL3_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 6.670e-53
Identity = 85/103 (82.52%), Postives = 100/103 (97.09%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            +SGQTPETPV+SKKSG++YEKRLI+KYIDAEGKCPATGEELTADDL+++RS+ AVKPRP EAASIPGLL+ +QNEWDDLMLET++LKQHL+QTRQELSQ+LYQ
Sbjct:    5 ISGQTPETPVVSKKSGHIYEKRLIVKYIDAEGKCPATGEELTADDLLDVRSEGAVKPRPAEAASIPGLLSFLQNEWDDLMLETYTLKQHLNQTRQELSQSLYQ 107
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A835YI40_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI40_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.150e-44
Identity = 73/103 (70.87%), Postives = 91/103 (88.35%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            +SG+ PE PV+S+K+G+L+E+RLI KYIDAEGKCP TGE L  DDL++++S+K V+PRP  A SIPGLLA+MQNEWDDLM+ET++LKQHLD TRQELSQALYQ
Sbjct:    5 ISGEVPEVPVVSRKTGHLFERRLIEKYIDAEGKCPITGEPLGVDDLMDVKSNKVVRPRPATATSIPGLLALMQNEWDDLMVETYTLKQHLDTTRQELSQALYQ 107
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A7S1C5N2_9STRA (Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5N2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.450e-39
Identity = 62/103 (60.19%), Postives = 83/103 (80.58%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            +SG  PE PV+S+ +G+LYEKRLI K I A G+CP + EE+ ADDL+++++ K++KPRP  A S+PGLL+I+Q+EWD  MLE  +L+QHLD TRQELSQALYQ
Sbjct:   12 ISGTVPEEPVVSRTTGHLYEKRLITKAIAATGRCPVSNEEIDADDLVDVKAAKSIKPRPASATSVPGLLSILQDEWDATMLEVATLRQHLDSTRQELSQALYQ 114
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A6V1T7M8_HETAK (Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T7M8_HETAK)

HSP 1 Score: 144 bits (364), Expect = 7.580e-39
Identity = 66/104 (63.46%), Postives = 86/104 (82.69%), Query Frame = 1 
Query:    1 TVSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            ++SG+ P+ PV+S KSG+L+EK LI KY+ +E  CP TG+EL+ +DL +++ +KAVKPRP+ A SIPGLL + QNEWDDLMLETH+LK HLD TRQ+LSQALYQ
Sbjct:    4 SISGEVPKVPVISVKSGHLFEKHLIEKYLKSESTCPVTGDELSIEDLKDVKVNKAVKPRPLTATSIPGLLNLFQNEWDDLMLETHTLKSHLDSTRQQLSQALYQ 107
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: UPI00051C4BE2 (pre-mRNA-processing factor 19 homolog 1-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI00051C4BE2)

HSP 1 Score: 134 bits (338), Expect = 8.740e-39
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 
Query:    1 TVSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQVR 318
            ++SG+ PE PV+SKKSG L+EKRLI ++I   GKCP TGE LTADD+I +++ K VKPRPV+AASIPG+L + Q EWD LML   +L+Q L   RQELS ALYQV+
Sbjct:    4 SISGEVPEDPVVSKKSGLLFEKRLIERHISDYGKCPVTGEPLTADDIIPVKTGKIVKPRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQVK 109
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: D8M7F8_BLAHO (Pre-mRNA-processing factor 19 n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M7F8_BLAHO)

HSP 1 Score: 141 bits (355), Expect = 1.100e-37
Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            +SG+ P  PV+SKK+GY+YEK LI KYI+AEGKCP TGEEL   DLI++++   VKP+P  A SIPGLL  +QNEWD +MLE+ +LK+HL   RQELSQALYQ
Sbjct:    5 ISGEVPHEPVVSKKTGYIYEKSLITKYIEAEGKCPITGEELDLSDLIDVKTQPLVKPKPTPATSIPGLLVSLQNEWDSMMLESFTLKKHLQAVRQELSQALYQ 107
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A444FYR8_ENSVE (Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444FYR8_ENSVE)

HSP 1 Score: 131 bits (330), Expect = 1.360e-37
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            VSG+ PE PV+SKKSG L+E+RLI  +I + GKCP T E+LT DDL+ ++++K VKPRP++AASIPGLL + QNEWD LML   +L+Q L   RQELS ALYQ
Sbjct:   12 VSGEVPEEPVVSKKSGLLFERRLIEHHITSHGKCPVTKEDLTTDDLVLVKTNKVVKPRPLQAASIPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQ 114
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A6U8B0X1_9EUGL (Pre-mRNA-processing factor 19 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8B0X1_9EUGL)

HSP 1 Score: 140 bits (354), Expect = 2.170e-37
Identity = 64/103 (62.14%), Postives = 83/103 (80.58%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            VSG +PE PV+S+K+G+L+EKR+I KYI   GKCP T +ELT DDL+ + S K  KPRP +A+SIPGLL++ QNEWD LM+E++++KQHLD  RQELS ALYQ
Sbjct:   10 VSGISPEEPVVSRKTGHLFEKRIIEKYIQQHGKCPVTDQELTMDDLLSVESSKTPKPRPAQASSIPGLLSLFQNEWDSLMIESYTMKQHLDTVRQELSHALYQ 112
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A446ITD5_TRITD (Pre-mRNA-processing factor 19 n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446ITD5_TRITD)

HSP 1 Score: 130 bits (327), Expect = 3.550e-37
Identity = 60/103 (58.25%), Postives = 81/103 (78.64%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            +SG+ P+ PV+SK+SG L+E+RLI +YI+  GKCP T EEL+ DD++ ++++K V+PRP++AASIPGLL I QNEWD LML   +L+Q L   RQELS ALYQ
Sbjct:    5 ISGEVPDEPVVSKRSGLLFERRLIERYIEDHGKCPVTKEELSMDDIVLVKTNKVVRPRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQ 107
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BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Match: A0A061S8V8_9CHLO (Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8V8_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 1.390e-36
Identity = 63/103 (61.17%), Postives = 86/103 (83.50%), Query Frame = 1 
Query:    4 VSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEIRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQALYQ 312
            +SG  PE PV+S+ SG+L+EKRLILK+++ + +CP TGEEL+ DDL++++++KAVKPR   A+SIPGLL + QNEWD LMLE+H+LKQ+L + RQELS ALYQ
Sbjct:    5 ISGHVPEEPVVSRSSGHLFEKRLILKHLETDPRCPVTGEELSKDDLLDLQTNKAVKPRTAPASSIPGLLGLFQNEWDALMLESHNLKQNLHKLRQELSHALYQ 107
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13680.2592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEL3_9PHAE6.670e-5382.52Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus T... [more]
A0A835YI40_9STRA2.150e-4470.87Pre-mRNA-processing factor 19 n=1 Tax=Tribonema mi... [more]
A0A7S1C5N2_9STRA1.450e-3960.19Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=B... [more]
A0A6V1T7M8_HETAK7.580e-3963.46Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma ... [more]
UPI00051C4BE28.740e-3961.32pre-mRNA-processing factor 19 homolog 1-like n=1 T... [more]
D8M7F8_BLAHO1.100e-3763.11Pre-mRNA-processing factor 19 n=1 Tax=Blastocystis... [more]
A0A444FYR8_ENSVE1.360e-3761.17Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=E... [more]
A0A6U8B0X1_9EUGL2.170e-3762.14Pre-mRNA-processing factor 19 n=1 Tax=Eutreptiella... [more]
A0A446ITD5_TRITD3.550e-3758.25Pre-mRNA-processing factor 19 n=2 Tax=Triticum tur... [more]
A0A061S8V8_9CHLO1.390e-3661.17Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13680contigH-elongata_contig13680:1423..2842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.5
Seed ortholog evalue2.7e-41
Seed eggNOG ortholog2880.D7G8G6
Preferred namePRPF19
KEGG koko:K10599,ko:K14808,ko:K20368
KEGG TC8.A.61
KEGG Pathwayko03040,ko04120,map03040,map04120
KEGG ModuleM00353,M00355
GOsGO:0000075,GO:0000077,GO:0000151,GO:0000209,GO:0000244,GO:0000245,GO:0000349,GO:0000375,GO:0000377,GO:0000381,GO:0000387,GO:0000393,GO:0000398,GO:0000726,GO:0000974,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0005811,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006302,GO:0006303,GO:0006325,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006629,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010720,GO:0010721,GO:0014013,GO:0014015,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030154,GO:0030163,GO:0030312,GO:0031323,GO:0031325,GO:0031461,GO:0031570,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033120,GO:0033554,GO:0034450,GO:0034613,GO:0034622,GO:0034641,GO:0035556,GO:0035861,GO:0036211,GO:0040007,GO:0042221,GO:0042742,GO:0042770,GO:0042802,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045685,GO:0045687,GO:0045786,GO:0045935,GO:0046483,GO:0046686,GO:0048024,GO:0048026,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048699,GO:0048710,GO:0048711,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051276,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0060255,GO:0060284,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0070013,GO:0070534,GO:0070647,GO:0070727,GO:0071006,GO:0071007,GO:0071012,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072395,GO:0072401,GO:0072422,GO:0080008,GO:0080090,GO:0090304,GO:0090734,GO:0098542,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000026
EggNOG free text desc.generation of catalytic spliceosome for first transesterification step
EggNOG OGsKOG0289@1,KOG0289@2759
EC2.3.2.27,3.6.4.13
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03041,ko03400,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Exons3
Model size318
Cds size318
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13680.2592.1prot_H-elongata_contig13680.2592.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13680 1423..2842 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929812.3931065-CDS-H-elongata_contig13680:1422..15241622929812.3931065-CDS-H-elongata_contig13680:1422..1524Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13680 1423..1524 +
1691679167.0400243-CDS-H-elongata_contig13680:1422..15241691679167.0400243-CDS-H-elongata_contig13680:1422..1524Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13680 1423..1524 +
1622929812.4087074-CDS-H-elongata_contig13680:1980..21001622929812.4087074-CDS-H-elongata_contig13680:1980..2100Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13680 1981..2100 +
1691679167.0556326-CDS-H-elongata_contig13680:1980..21001691679167.0556326-CDS-H-elongata_contig13680:1980..2100Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13680 1981..2100 +
1622929812.4252036-CDS-H-elongata_contig13680:2746..28421622929812.4252036-CDS-H-elongata_contig13680:2746..2842Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13680 2747..2842 +
1691679167.073994-CDS-H-elongata_contig13680:2746..28421691679167.073994-CDS-H-elongata_contig13680:2746..2842Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13680 2747..2842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13680.2592.1

>prot_H-elongata_contig13680.2592.1 ID=prot_H-elongata_contig13680.2592.1|Name=mRNA_H-elongata_contig13680.2592.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
TVSGQTPETPVLSKKSGYLYEKRLILKYIDAEGKCPATGEELTADDLIEI
RSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHSLKQHLDQTRQELSQ
ALYQVR
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mRNA from alignment at H-elongata_contig13680:1423..2842+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13680.2592.1 ID=mRNA_H-elongata_contig13680.2592.1|Name=mRNA_H-elongata_contig13680.2592.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1420bp|location=Sequence derived from alignment at H-elongata_contig13680:1423..2842+ (Himanthalia elongata Himel1 dioecious)
ACAGTCTCGGGGCAGACGCCGGAGACCCCCGTACTGTCGAAGAAGTCTGG
ATACTTGTACGAGAAGCGTCTAATTCTTAAGTATATCGACGCCGAGGGAA
AGGTAAGGGAGACACGGCTACGACCACCGATTCCCGATCTCGCGCTGTTC
ATTTTTGCGGAGCCGGGATAACACTCTTCAACGAATAAAGTATGTGGTAC
GAGTAAAAACTTGCGGGCGCTTTTGTGAAAGTATCGAGCGTTGCGCGGCG
CTGGAGAAACGATGGACATATTTTCCCGCTCTAATGCTATCGATAGGCCC
TCATTAGAGTTATTAGAGCTATGGGTCTAATCTGCGCGAGAGGACAGCAC
GGGCCGATCCGAGACCTAGTTTTTTCCCGTAAGATTGTCACGACCCTAAA
CCTTAACCCGGAATGGCGGTGCGTCGACATTTCGGTTGCATAGCGCTTTT
GAGCTAATGGAGTCTCAGCGCCGCTCCCCCAATTGCACGACATACATCAG
TACGGAAGATCTAGAGCTTTATGCCTCTCTCCTGCTCCCCCTTCTCTTAA
CACTCCAGTGCCCCGCCACCGGGGAAGAGCTGACTGCGGATGATTTGATA
GAGATTCGATCGGACAAGGCGGTCAAGCCACGCCCCGTCGAGGCCGCATC
CATACCGGGTCTCCTGGCAATCATGCAGGTTAACTCTTACGCTTTTTTTA
ATACTGTAGGGATTGCTTGGCTACATTGTGGGAAAGCCTAAAGGGAAAAT
ATCGTACTTTTACTATAAGATGAGACGAACGAGCAGTAGAAAGTGACATC
GGTACTGCTGCAGGCGGTACTGTTCGTGGCCTTTAGTGCGCACGTTTTTC
TTGATTGATTTTTGGTATGTTGGCACGTCATCGTGGGGGTGGAAGTGACG
TGATTATCGTTTATGTATACCAGAAGAGAAGCATCATTCCGTGTCCGTTG
CGTGCCCTTAATATCCCCCCCCCCACGGCCCAATCGTATCTGGCTTAGAT
TTACCATCAATAATATTGATGCTGGATTAATGTTTGCGCGAGCCAGCGGT
TGATGCTGCGGTGCTATATAGAACGAGGCAAGAGAGAGGCGAAAAAATAC
AAGTTCCCGAATAAACAAGGGAAGCGATGTCAAGTCTCGCTAGCTCTTAG
AGATTCACATTTTCTCTCGCATCCTCTCTCGATATATGTATACAGTATAT
TTTGTACAAAAAACATCAGAATGCGCGATGTCGACAAACGAAAAATCGAG
GGCTCGTTTAAAAACTGATATTTTCTGTGCGTCTGTTTTTGCAACAACAA
CAAAACACACGGTAAACCCCGCAGAACGAGTGGGATGACCTCATGCTCGA
AACGCACTCGTTAAAGCAGCACCTTGATCAGACTAGGCAAGAGCTCAGCC
AAGCCCTGTACCAGGTGAGA
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Coding sequence (CDS) from alignment at H-elongata_contig13680:1423..2842+

>mRNA_H-elongata_contig13680.2592.1 ID=mRNA_H-elongata_contig13680.2592.1|Name=mRNA_H-elongata_contig13680.2592.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at H-elongata_contig13680:1423..2842+ (Himanthalia elongata Himel1 dioecious)
ACAGTCTCGGGGCAGACGCCGGAGACCCCCGTACTGTCGAAGAAGTCTGG
ATACTTGTACGAGAAGCGTCTAATTCTTAAGTATATCGACGCCGAGGGAA
AGACAGTCTCGGGGCAGACGCCGGAGACCCCCGTACTGTCGAAGAAGTCT
GGATACTTGTACGAGAAGCGTCTAATTCTTAAGTATATCGACGCCGAGGG
AAAGTGCCCCGCCACCGGGGAAGAGCTGACTGCGGATGATTTGATAGAGA
TTCGATCGGACAAGGCGGTCAAGCCACGCCCCGTCGAGGCCGCATCCATA
CCGGGTCTCCTGGCAATCATGCAGTGCCCCGCCACCGGGGAAGAGCTGAC
TGCGGATGATTTGATAGAGATTCGATCGGACAAGGCGGTCAAGCCACGCC
CCGTCGAGGCCGCATCCATACCGGGTCTCCTGGCAATCATGCAGAACGAG
TGGGATGACCTCATGCTCGAAACGCACTCGTTAAAGCAGCACCTTGATCA
GACTAGGCAAGAGCTCAGCCAAGCCCTGTACCAGGTGAGAAACGAGTGGG
ATGACCTCATGCTCGAAACGCACTCGTTAAAGCAGCACCTTGATCAGACT
AGGCAAGAGCTCAGCCAAGCCCTGTACCAGGTGAGA
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