mRNA_H-elongata_contig1363.2563.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1363.2563.1
Unique NamemRNA_H-elongata_contig1363.2563.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A6H5KY10_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY10_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 1.690e-153
Identity = 233/390 (59.74%), Postives = 288/390 (73.85%), Query Frame = 1
Query:    1 LPGHLSPFWNKRRNISLLGRRLFRISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQQDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVRHLRGDCLGDSGD---CQCTAVADVTVKPGEGAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINSQ----GVLMDGVVTLTEKEEFNKIRRWMGVEYKARIREMEATGWSAKEFDQGLVDAGATKEYEVLVRDVLRGGAVDDAGRAKLRNYRITKGVDSLHHLCVLEKMGWTLDDLEAG 1149
            LP HLSP WN+R +I + G  L R+SLSEAAGHLSF+ LG+GFLET+LL LRVYAAAG+S SI FQY+R QPLWIPISWN VFL IN GM  +LLKE+ DA +QDQE A LYD+            FRESGLTAVDFMKI+ IS+  +  +GDVLA QDV Q++LYLV++GEL+VSKGG  IA V AGEF GEMSF+RH+R +C G +G    C C AVA+V VK G GAK TSW F+ELRD+L+ NPNMSV FHAA+A AM +KL+D+H+PA+  +    GVL+DGVVT  EK+E  K+R+ M V+      E++A GWS +EFDQG  D  +T+ YE L ++VLR G V+D GR KLR +R   GVDSLHH+ VL+K+GW+LD LE G
Sbjct:   72 LPHHLSPRWNERHDICVFGTHLCRLSLSEAAGHLSFVCLGIGFLETELLPLRVYAAAGVSASIVFQYYRPQPLWIPISWNFVFLAINIGMAGVLLKEERDATRQDQETAALYDKT-----------FRESGLTAVDFMKIRGISEDWRHPAGDVLAEQDVTQKRLYLVMEGELQVSKGGNDIAPVKAGEFAGEMSFLRHVRRECEGSAGTPEVCDCVAVANVKVKHG-GAKVTSWQFDELRDLLAHNPNMSVRFHAALARAMVSKLVDTHNPAVKYRQLLTGVLVDGVVTTMEKDELEKMRQDMSVDEATHTAELKAAGWSTQEFDQGYQDDFSTRTYEALAKEVLRDGTVNDKGRTKLRIHRQNNGVDSLHHMRVLKKLGWSLDQLEEG 449          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: D7FUU0_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU0_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 1.850e-129
Identity = 208/366 (56.83%), Postives = 262/366 (71.58%), Query Frame = 1
Query:   73 ISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQQDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVR---HLRGDCLGDSGDCQCTAVADVTVKPGEGAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINSQ----GVLMDGVVTLTEKEEFNKIRRWMGVEYKARIREMEATGWSAKEFDQGLVDAGATKEYEVLVRDVLRGGAVDDAGRAKLRNYRITKGVDSLHHLCVLEKMGWTLDDLEAG 1149
            +SLSEAAGHLSF+ LG+GFLET+LL LRVYAAAG+S SI FQY+R QPLWIPISWN VFL IN GM  +LLKE+ DA +QDQE A LYD+            FRESGLTAVDFMKI+ IS+ S+  +GDVLA QDV QR+LYLV++GEL+VSKGG  IA V AGEF GE +       L+ + + +    + +    V VK G GAK TSW F+ELRD+L+ NPNMSV FHAA+A AM +KL+D+HDPA+  +    GVL+DGVVT  EK+E  K+R+ M V+      E++  GWS +EFDQG  D  +++ YE L ++VLR G V+D GRAKLR +R   G+DSLHH+ VL+K+GW+LD LE G
Sbjct:    1 MSLSEAAGHLSFVCLGIGFLETELLPLRVYAAAGVSASIVFQYYRPQPLWIPISWNFVFLAINVGMAGVLLKEKRDATRQDQETAALYDKT-----------FRESGLTAVDFMKIRGISEDSRHTAGDVLAEQDVTQRRLYLVMEGELQVSKGGNDIAPVKAGEFAGEKARFGCRIFLQWETVVEVSRPKVSPK--VKVKHG-GAKVTSWQFDELRDLLAHNPNMSVRFHAALARAMVSKLVDTHDPAVKYRQLLTGVLVDGVVTTMEKDELEKMRQDMNVDEATHTAELKTAGWSTQEFDQGYQDDFSSRTYEALAKEVLRDGTVNDKGRAKLRIHRQNNGIDSLHHMRVLKKLGWSLDQLEEG 352          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A835ZD23_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD23_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.880e-50
Identity = 130/421 (30.88%), Postives = 196/421 (46.56%), Query Frame = 1
Query:   67 FRISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQQDQ-EDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKG-GQPIATVCAGEFVGEMSFVRHLRG-------------------DCLGDSGDCQ---------CTAVADVTVKPGE--------------GAKGTS------WDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINSQG-------VLMDGVVTLTEKEEFNKIRRWMGVEYKARIREMEATGWSAKEFDQGLVDAGATKE---YEVLVRDVLRGGAVDDAGRAKLRNYRITKGVDSLHHLCVLEKMGWTLDDLEAG 1149
            F+ + S   GH SF+ L LG++E+D+L LRV++A GI  S+ FQY+R QPLWIPISWNT+FL IN GM+ALL+ E+  A + D  E+  L+D+            F + GL+AV+F+ + R+++     +G  LA  +  Q K+YL+IDG  EV  G G  I  +   +FVG M+F+R L                       L +  D +           A A + V P                  + T+      WDF+ LR  L  +P         I++ +  KL  S DP I            L  G +  TEK +  + R    +        +   GW+  +++ G      T     YE +++  LRGG +++ GRA+LR YR    ++   HL  + K+GWT +  E G
Sbjct:   24 FKTNWSNLCGHGSFLMLALGYMESDVLLLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTIFLLINGGMIALLVNERRQATRLDSTEERELFDQM-----------FAKLGLSAVEFLHLIRLAERETLPAGTTLATFNEPQDKVYLIIDGTAEVQGGDGDLIGHISNFQFVGSMAFLRFLNEVQEHERDRNRERQVVSSLLAALANELDPEHWEIEPDGTVVATATMAVDPHMPHSLHPFSWCVCMYAVRATTECHVYAWDFHLLRAYLKRHPLEGNAMQVTISADLTRKLDQSRDPHIRQVEYRQLLLTALSGGELLPTEKRKLQRFRENHDITLAEHDAMLAQLGWTKPDYETGYQQKAITASFAAYERMLQQELRGGTLNEDGRARLRRYRSQSNINPQQHLLAIAKLGWTYEQYEMG 433          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A7S3HEK0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEK0_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.330e-31
Identity = 70/175 (40.00%), Postives = 109/175 (62.29%), Query Frame = 1
Query:   67 FRISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQQDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFV 591
            + +SLS+ AGH SFI L L +LETD L LR++AA+G+S SI FQY+R +PLWIPI WNT+FL IN  M+ LL K++H+A     E   L++             F + G+T VDF+ + + ++  +   G+V+  + +K  +++ V  G+L V++ G  + T+   +FVG MSF+
Sbjct:   73 YTMSLSDLAGHSSFILLALSYLETDFLLLRMFAASGVSLSIIFQYYREKPLWIPIRWNTLFLVINVVMIGLLWKKEHEAHTIPSETKHLFE-----------STFMKKGMTPVDFLHLCKAAERIEVKKGEVIISEKLKNSRVFHVRSGKLSVTQNGTLVRTIQPDQFVGSMSFL 236          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A7S2ICB7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ICB7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.740e-30
Identity = 87/283 (30.74%), Postives = 137/283 (48.41%), Query Frame = 1
Query:   73 ISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQQDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVRHLRGDCLGDSGDCQCTAVADVTVK-------------PGEGAKGTS--WDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINSQGVLMDGVVTLTEKEEFNK 876
            +S +  AGH +F   GL +   D++ LR+ A  GIS S+ FQY+R QPL IP+ WN +FL +NA MVA L KE+ +A     E   L+ +          G F++ G   V+F ++ +++K  +  +G  L     + RKLY++  G   + + G  + ++   +  GE+ F+ ++  D   D+       VA V+V+              G G  GT   WDF EL   LS+ P +S    A I+  +  KL DS +     +  +M    +  EKEE  K
Sbjct:  103 MSAAVLAGHSAFFLTGLAYATKDVMHLRLLAMGGISLSMVFQYYRPQPLSIPLRWNALFLAVNAAMVAALYKERKEAENMGPEFEALFSD----------GDFQKRGFGRVEFYRLFQLAKREELKAGHYLKIAGQEMRKLYIITKGSATIERNGVKLQSISQYDTCGELEFISYIDDDENTDT-------VATVSVQIDGIYADDKKDDNDGSGDGGTVYVWDFEELAPFLSNQPRVSNALLAYISHELREKLTDSWE----LKSPMMKEDASKKEKEELAK 364          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: D8LD28_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.160e-29
Identity = 110/426 (25.82%), Postives = 180/426 (42.25%), Query Frame = 1
Query:   31 KRRNISLLGRRLFRISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQ--QDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVRHLRGDCLGDSGDCQCTAVADVT-----------------------------------------VKPGEGAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLI-DSHDPAINSQGVLMDGVVTLTEKEEFNKIRRWMGVEYKARIREMEATGWS---------AKEFDQGLVDAGATKEYEVLVRDVLRGGAVDDAGRAKLRNYRITKGVDSLHHLCVLEKMGWTLDDLEAG 1149
            +RR +  +G +    + S   GHLSF+ L L +LETD+L+LR  AA+GI  SI FQ++R QPLWIPI WN VFL IN  M+ LLLKE+ +A     D E A  + E            F    LT VDF+++  +++    A G  L+ +   Q +++L+++G  EV      +  +   +FVG M+F R ++      +     T   D++                                             +   G    F E +++      ++V    +I  +MA   + D+     +  G +     T+T   +      W     +A I+     G +          ++ DQ     G  + Y +L+ + L GG +    + KL  YR   G+ S  H  +L++  WT ++ EAG
Sbjct:   28 ERRPLQFMGCQT-TTTASNQCGHLSFVILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEV-----------FAPVELTPVDFVRLMDLAERRLVAKGTHLSEEGQPQEEVFLIVEGAAEVEAESAAVGHLEQKQFVGSMAFNRFMQASASPTT--TSPTVPTDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVPGGGGVFKEAKEVA-----LNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYV-WDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSR---GPEERYRLLLAEALDGGVITPIEKKKLTRYRDMHGISSEEHRELLKEHEWTKEEFEAG 430          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A096PB10_OSTTA (RmlC-like jelly roll fold n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PB10_OSTTA)

HSP 1 Score: 121 bits (304), Expect = 1.870e-27
Identity = 77/243 (31.69%), Postives = 120/243 (49.38%), Query Frame = 1
Query:   76 SLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDA-RQQDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVR---HLRGDCLGDSGDCQCTAVADVTVKPGEGAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLI 792
            S+ E  GH+SF+ LG  +L +DL+ LR  A  G+S ++ FQYFR  PLW+PI WN +F+ INA  VA +  ++ DA R    E+  LY+                S +   DF  +    +      G  +  +      + +++ G+ +V  GG+ + T+ AG F+GEMS +R   H +   +   G  Q  A A  TV+    A+   WD   LR +L ++ N+    HAA    +A KL+
Sbjct:  135 SVREVFGHVSFLLLGYSYLTSDLMQLRALAVGGLSAAMVFQYFRADPLWLPIRWNALFVAINAIWVAKMWFDERDAERWCTAEERALYER-------------HFSHMALADFRTLVSRGRWMDLDVGTEVTTEGKPNVSVCVIVRGDADVFIGGKRVNTIPAGNFIGEMSLMRSVEHGKNGKVNKEGSIQARA-ASATVRIVNRARVFQWDDGVLRRLLREDDNVKSGVHAAFGVGLAEKLL 363          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A7S2UYC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYC5_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.660e-24
Identity = 67/259 (25.87%), Postives = 126/259 (48.65%), Query Frame = 1
Query:  379 FRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVRHLRGDCLGD------------SGDCQCTAVADVTVKPGE--GAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINS----QGVLMDGVVTLTEKEEFNKIRRWMGVEYKARIREMEATGWSAKEFDQGLVDAGATK-EYEVLVRDVLRGGAVDDAGRAKLRNYRITKGVDSLHH 1098
            F++ G++  +F+K+ ++S+  +   G+ +A+   KQ  LY++  GE +V   G+ +  +   +FVGE  F+ ++  D   D              +     ++   V  G   GA   +W+F++LR  L  +P+ +     +I++ +  K+  S  P        QG L+DG V++ EKE+    R+   +  K     ++   W+ +EF++G          YE L+R+ L+ G +  AGR KLR YR++ G++   H
Sbjct:   24 FKQQGMSPGEFVKLMKLSEKKELKPGEPMAQAGGKQHHLYMISSGEADVVHDGEQVGHIKTQQFVGESPFLYYMNEDSTEDPVPSSKRENMANGNELASPLISHCDVSSGHNVGAVAYTWEFDKLRSYLKSHPHAAQTLQGSISADLTKKVDASWSPLERYRTIVQGTLLDGHVSIIEKEKLAHFRKKHRITMKDHNIVLDGLSWTKEEFERGYQQLEEDLVAYEKLLRNELKSGTLSQAGREKLRRYRVSVGLNLERH 282          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A7S4W018_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W018_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.990e-23
Identity = 80/303 (26.40%), Postives = 134/303 (44.22%), Query Frame = 1
Query:   73 ISLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQ---QDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVRHLRGDCLGDSGDCQCTAVADVTVKP-------------------------GEGAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINSQGVLMDGVVTLTEKEEF-NKIRRWMG 894
            +S++  +GH +FI  GL +  +D+L LR+ A  GIS S+ FQY+R QPL IP+ WN++FL +N  MV  L  E+ +A +   ++ ED                G F + G   ++F ++ R+++  +  SG  + R   +  KLY++  G   + + G  + ++   +  GE+  + H+  D              D T+                             GA    WDF EL   L+  P++     A ++  +  KL DS +  ++   +     VT  EKEE  N+  R MG
Sbjct:  110 LSIAVLSGHTAFILTGLAYATSDVLHLRLLAMGGISLSMLFQYYRPQPLSIPLRWNSLFLAVNVIMVTQLYLERKEAEEFMGEELEDLFTV------------GLFEKRGFGRLEFWRLFRMARREELESGFYIKRVGEEVNKLYIITKGSATIERNGLKLQSISTYDTCGELELISHID-DXXXXXXXXXXXVXVDETMHTQADXXXXXXXXXXXXXXXXXXXXXXXSGAIAYVWDFEELTTFLAKQPSVKNALLAYVSHELKEKLTDSWELKLDPDTI---DQVTRKEKEELANQFLRLMG 396          
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Match: A0A835YLU4_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 5.560e-23
Identity = 111/433 (25.64%), Postives = 174/433 (40.18%), Query Frame = 1
Query:   76 SLSEAAGHLSFIFLGLGFLETDLLSLRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHDARQ-QDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRASGDVLARQDVKQRKLYLVIDGELEV-----------SKGGQPIATVCAG---------------------------------EFVGEMSFVRHLRG--DCLGDSGDCQCTA-----------------------VADVTVKPGEGAKGTSWDFNELRDILSDNPNMSVCFHAAIASAMAAKLIDSHDPAINSQGVLMDGVVTLTEKE----EFNKIRRWMGVE-YKARIREMEATGWSAKEFDQGLVDAGATKEYEVLVRDVLRGGAVDDAGRAKLRNYRITKGVDSLHHLCVLEKMGWTLDDLEAG 1149
            + S   GH SF+ L LG++E+D++ LRV++A GI  S+ FQY+R QPLWIPISWNT+FL IN GM+A L+ E+  A    D E+  +Y+E            F + GL+AV+ M + R+++     +G  +A       K YL+ DG + +              G PI+++                                    +FVG M+F+R L    D   D  + +                          V  V    GEG  G                       AA+A+  AA+  D  + +  S  +    V T TE      +F+ +R ++     +    ++  +    ++ DQ          Y  L+   L GG V    + KL++YR   G+ +  H  +L  +GWT  D   G
Sbjct:   75 NFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEM-----------FCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGV----AAVAAGEAAQE-DEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSR---DPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTG 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1363.2563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5KY10_9PHAE1.690e-15359.74Cyclic nucleotide-binding domain-containing protei... [more]
D7FUU0_ECTSI1.850e-12956.83Cyclic nucleotide-binding domain-containing protei... [more]
A0A835ZD23_9STRA5.880e-5030.88Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3HEK0_9STRA1.330e-3140.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2ICB7_9STRA2.740e-3030.74Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
D8LD28_ECTSI1.160e-2925.82Cyclic nucleotide-binding domain-containing protei... [more]
A0A096PB10_OSTTA1.870e-2731.69RmlC-like jelly roll fold n=2 Tax=Ostreococcus tau... [more]
A0A7S2UYC5_9STRA6.660e-2425.87Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4W018_9STRA2.990e-2326.40Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A835YLU4_9STRA5.560e-2325.64Cyclic nucleotide-binding domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1363contigH-elongata_contig1363:1171..6092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.3
Seed ortholog evalue1.6e-104
Seed eggNOG ortholog2880.D7FUU0
EggNOG free text desc.Cyclic nucleotide-monophosphate binding domain
EggNOG OGs2DQI1@1,2S6BX@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionCyclic nucleotide-binding domain
Ec32 orthologEc-06_001100.1
Exons8
Model size1149
Cds size1149
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1363.2563.1prot_H-elongata_contig1363.2563.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1363 1171..6092 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929809.0801883-CDS-H-elongata_contig1363:1170..13421622929809.0801883-CDS-H-elongata_contig1363:1170..1342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 1171..1342 +
1691679165.7862308-CDS-H-elongata_contig1363:1170..13421691679165.7862308-CDS-H-elongata_contig1363:1170..1342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 1171..1342 +
1622929809.097054-CDS-H-elongata_contig1363:1984..21871622929809.097054-CDS-H-elongata_contig1363:1984..2187Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 1985..2187 +
1691679165.8002322-CDS-H-elongata_contig1363:1984..21871691679165.8002322-CDS-H-elongata_contig1363:1984..2187Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 1985..2187 +
1622929809.107523-CDS-H-elongata_contig1363:2689..27681622929809.107523-CDS-H-elongata_contig1363:2689..2768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 2690..2768 +
1691679165.8086483-CDS-H-elongata_contig1363:2689..27681691679165.8086483-CDS-H-elongata_contig1363:2689..2768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 2690..2768 +
1622929809.119336-CDS-H-elongata_contig1363:3099..32241622929809.119336-CDS-H-elongata_contig1363:3099..3224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 3100..3224 +
1691679165.8170714-CDS-H-elongata_contig1363:3099..32241691679165.8170714-CDS-H-elongata_contig1363:3099..3224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 3100..3224 +
1622929809.1329772-CDS-H-elongata_contig1363:3870..39451622929809.1329772-CDS-H-elongata_contig1363:3870..3945Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 3871..3945 +
1691679165.8256955-CDS-H-elongata_contig1363:3870..39451691679165.8256955-CDS-H-elongata_contig1363:3870..3945Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 3871..3945 +
1622929809.1480293-CDS-H-elongata_contig1363:4541..47021622929809.1480293-CDS-H-elongata_contig1363:4541..4702Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 4542..4702 +
1691679165.8352182-CDS-H-elongata_contig1363:4541..47021691679165.8352182-CDS-H-elongata_contig1363:4541..4702Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 4542..4702 +
1622929809.159968-CDS-H-elongata_contig1363:5228..54011622929809.159968-CDS-H-elongata_contig1363:5228..5401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 5229..5401 +
1691679165.8443556-CDS-H-elongata_contig1363:5228..54011691679165.8443556-CDS-H-elongata_contig1363:5228..5401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 5229..5401 +
1622929809.1727057-CDS-H-elongata_contig1363:5931..60921622929809.1727057-CDS-H-elongata_contig1363:5931..6092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 5932..6092 +
1691679165.8538184-CDS-H-elongata_contig1363:5931..60921691679165.8538184-CDS-H-elongata_contig1363:5931..6092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1363 5932..6092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1363.2563.1

>prot_H-elongata_contig1363.2563.1 ID=prot_H-elongata_contig1363.2563.1|Name=mRNA_H-elongata_contig1363.2563.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=383bp
LPGHLSPFWNKRRNISLLGRRLFRISLSEAAGHLSFIFLGLGFLETDLLS
LRVYAAAGISCSIAFQYFRLQPLWIPISWNTVFLGINAGMVALLLKEQHD
ARQQDQEDATLYDEARGRGMRGDWGAFRESGLTAVDFMKIKRISKTSKRA
SGDVLARQDVKQRKLYLVIDGELEVSKGGQPIATVCAGEFVGEMSFVRHL
RGDCLGDSGDCQCTAVADVTVKPGEGAKGTSWDFNELRDILSDNPNMSVC
FHAAIASAMAAKLIDSHDPAINSQGVLMDGVVTLTEKEEFNKIRRWMGVE
YKARIREMEATGWSAKEFDQGLVDAGATKEYEVLVRDVLRGGAVDDAGRA
KLRNYRITKGVDSLHHLCVLEKMGWTLDDLEAG
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mRNA from alignment at H-elongata_contig1363:1171..6092+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1363.2563.1 ID=mRNA_H-elongata_contig1363.2563.1|Name=mRNA_H-elongata_contig1363.2563.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4922bp|location=Sequence derived from alignment at H-elongata_contig1363:1171..6092+ (Himanthalia elongata Himel1 dioecious)
CTACCAGGTCATTTATCGCCTTTCTGGAACAAGCGGCGTAATATCTCATT GTTGGGGAGGCGCCTGTTTCGTATAAGCCTCAGCGAGGCAGCGGGCCATC TTTCCTTCATATTCCTCGGCCTCGGGTTTCTCGAGACCGATCTTCTGTCA TTACGAGTCTACGCCGCGGCGGGTGAGGAAAGGATCGAAACTGAGCAGAC CACTTTCTGGACTCTGCCGGGATGAGACGATAAGAAGCGCGACCGTTGGG CGCGTTTTCCTTGCGACGCTCGATGTTTAATGTTCGAGCTGGTCGTTGGC ACCGTTTACAAATCATATTGTTTCACGAGGATATTTTGATCCGCACCGTG CGAATTTGAACTTTTAATTGAATTTTAGTATACTGCTGAATGCCCCTGAT GGGGTCAACTTGATAGACCTCATTTTTACAAAGCTACGCTGGCCTCGGGA GTCCAGGAGCTATTCTCGGGAGTGCATTCGATGAAAAAACAAGCAGGTGA AAAGCAGCAAGTAAAAAAATTGCCCGATTCCTACTATACATATAAGCGTG CTCGTGTGTCTCTTTTCTCGAGAACCCTACCTTAGTAGGCCCACTGTAGC GAGGTTGCCCAGCGCGCGCCTGGAAACTACTCAACCACAGTACCTCAAGT GTGGACTCGATCGCGCTACATATCGTGCTCGAGTTAGTGCGTATGATACA GACGTGTGAGTCCCTCAATCAGGGGGATAACTATAAGTATACGCCGATAG CTGTAGCTATACGCTATAATTATACGCTATGTGGATCGCTGCCGCTGCCA CAACCGGATGGCAGGAATCTCGTGCAGCATCGCGTTCCAGTATTTTCGCC TTCAGCCGCTCTGGATCCCGATTTCGTGGAATACCGTCTTTCTCGGCATC AACGCCGGCATGGTGGCCCTCCTCCTGAAAGAGCAACACGACGCCAGGCA GCAGGACCAGGAGGATGCCACCCTTTACGATGAGGCGAGAGGGAGGGGGA TGAGGGGAGATTGGGGAGTTGAGATATCTTGACCATCCCGGCAGCCACCA TCCGGGACAACCCCCCGTCCCCCCTTTCCAACCCGCCCCCAATATGACGC CGAAATCGCGGGAAAGAAAGGACTGCCGCAACGCTTTCATGTTTTCGAGG TAGCGCGAGACACCAAACGCACTTATTTTGCGAGCGCCGCTTTTACAGAG GAATCGATATATACATTTTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCCTCATTGTAGATCCCTGGGTGTTAGCGCGAAATTTTGAAGCACGA GCTTTTTGCGGTGCACATCAACGGGCAGCCCCTGGTACCGCACGCGTACT TTTTTTGTTTGGATGTCTCCCATTTCTACGTACGAGGCGGGGTCGAGTGA GGGTTGCTTGTCGCTGTGGGCGACTTCGGGTGTGCTGTCTGCGCCGAATC TGCTATCGCTCAAGCCGCGTTGTTCCTACAATGTCTTCGCCTAAGGGGAA CGGTTGACGCGCTCTGCAGGCCTTTCGAGAGTCCGGACTCACGGCAGTAG ACTTCATGAAGATCAAGAGAATCTCGAAGACGAGCAAACGCGCGTCAGGT TCGTGGACTGATAGAGATGAGACAGGCCTACGGTGTACGTTGTGGAACTG CGCTTCTCGAATTATCGTTCAGGAGGACGGGGGGACGGGGTGGTTAGGAG GATTTTGTGCGCGCAAACAAAGTATAAACTCAAGCCTCTTGATACTTATT CGCGCGCGAGAAGACACGCGGGTAATACGCGCGAACAAATGTTCGTTGTG GATTTATGTACGCGAGTATCTCCGCCTCGTAGGGTCCATCGTGCGGTAAG CATATTTTCCCTTCCCCGCGACAATTTTCTGCGTGGCTCGCCCCCACTGA CTCCGCGCGCGCATGCTCAATAAAGACAGGCGATGTGCTGGCGCGACAAG ACGTGAAGCAACGAAAGCTGTATCTAGTCATTGACGGCGAGCTCGAGGTG TCGAAGGGCGGACAGCCGATCGCGACCGTTTGCGCAGGGGAGTTCGTCGG AGAGGTGGGTGGCTAATGCTGCCGGTATCCAGGAGGTCGATTTTGTGACG CGATTAGAGAAAACGATCAATTAGGTCGACAAGGCTGACGCGACGCGGCA CACGGCCGTCAAGAACGTTCCTCGCCGTTACTCATTGTGCCAATTAAATT GCCAACGGAGTATGCAGACAAAGCGGGTGTAAAAGGTTGGTGAATGGAAT CAGGGCTGCAACAGCGGTGGAGAGTTCGCACGGAAGAGGCGGTAGAAAGT TGTGTGTGTTTTCTATCTAGATCTCTTGACTTGGCAATCTACACTCAACC GTGCTCTCGCGGGTAAGGATTTTCAGAGGTCCTGCCGCGACTTGGGTGTA CCTCCTCCTTAACGCCGCCGTTGCTCTCTCGGGGCGTTACAAAAAAAGGG CGCTCCAAATATTCCAGCGAGAACGTGCGCAGAGGGCAGCGGCCTAGTGC TAACAGCGCATGTGTCCTCGTCATACCGTACGAGACCGTAGCCGCCATCA GCGCGTCTGGGCATTTTTCTATTGAAGGCCTTTATCTTACTAAGAAAAGC GTGGCGCACTATGCGCGTCCTGCGTTGGCCACGATCTATTTTTTCTGTCA GCTCGTAACTGTTTGTTATCGTGCGACGATCGACCCCACCGAACCGTCAG ATGAGCTTCGTTAGGCACTTGAGAGGAGATTGCTTGGGCGATTCGGGAGA CTGCCAGTGTACCGCCGTGGCAGACGTAAGTTCTCGATGAGAAGACCCGA CGTAATTGGGTGAATAATATTGAGGCAGATGCCGCAAGGATGCGAGAAAG AACGTTCAGTTAAAATCTTCTCCCACGTTTCGGGGGAAAGCAGCCACAAC TTCGAGATAGATCAATAGGGGGGGGGAAGTAGAAAAATTTCTGTAAAACC ATCCGAGTGCACAATCGCAGGATATTACGTAGACATGCAGTCATCCGAGA CCTGCTGCGTATATTATGTTACTTGGTAAACAGTAAAGAGCATCGTCTTC GTCCGTGTAGCAAAATGCTCTCGGCGAGCCCTGGCTGCTATTTCCCGCGA GAAGACCTCCTTACTTAACGGACGATAATGTGAGCAGCGGGCTGAGACGA GGGGTCGCGTGTTTTCGTGCTAAAGCTGCTGGTGTTTCTTCGAAGTGCTC CTGTTAGATTACCATCCTCGTCATGGGCGCGCAAGCGCTCGTACAAGCGA TGGATTTCTATGTTTGTTTTATGTATAGGCCTCAAATGATTCACTCTTTA CCGCCCCACGGCAACGGCGGCTTCATTTTTTTCCGTCCAGTTCCGATCTT GATGTTCGGTGGATCTCGCAGGTGACGGTAAAACCAGGGGAGGGAGCCAA GGGCACGTCCTGGGACTTCAACGAGTTGCGAGATATATTGTCCGACAACC CCAACATGTCCGTCTGCTTCCACGCCGCTATCGCGAGCGCCATGGCTGCC AAATTGATCGATTCGCACGACCCAGCCATCAAGTACCGCTAGCTCTTGAA GGCACGCCTCATCTTATATGGAGCAGTGTTTCGCTCTCCCACTCTGCTCG CTCTCGCAGAGTGATTTATACTCGGTTTGCGCGGGCGTGTGTGAGTGGGG GGGTGTTTATTGATTAAATTTTACATGACCACGCAATCCGATCCTTTCAT GCTAGTTATTCTAGCCTACTCGCATTGGTTCTCCCTATGGGGGATCAAAT GTGTGTGTGTGTGTGTGTGTGTGTTTATGAGTGTCTACGCCAGGGCACTT CAATTGAAACGTCGATCAATTTACACACGTAAGAAAGGTCATGCTTCTAC CCACCGGAGGAACGCCGCGCGTACGGAAACATTGTGCTGACGAAAGCCGC TCGATCTGAATCCTGCCGTCAGAGGGAACTGTACACGTGGTTTCGTTTGG ACCATATTGAAGCAAGATCTTGACTCGAATGAGTCGGGTTCGCGCCGTCT TCTCATGTCAAGTCGAATTTTCCGGCCGGGAATTATCTTTTGTTTGCTTG TTCTCGAGCTCGCAGGGCGTTCTGATGGACGGAGTCGTGACCCTCACAGA AAAGGAGGAGTTCAACAAGATACGGAGGTGGATGGGCGTAGAGTATAAAG CTCGTATTCGGGAGATGGAGGCCACCGGATGGAGCGCCAAGGAGTTCGAT CAGGGGTTAGTGGATGCGGGCGCGACGAAGGGTCACACATTAATGGGCTG ATGGGGAGGATGAAGGGGAGGGTCTCCTTGTTCGCAAAATCTTGTTGTGA ATAAAATTTGACTTGATGATTTTGTCAGGCATGTCCAAGAGAGTAGTGTG CTTAATAGTTCTAACCTGAGGAAAACGTTACAGTTCGTGACCCTTATAAA TGCACAACATGAGAAATGGCACCCTTGATACTTTGTAGGGGAGGATGCCT GGGGGGGTGGGGTCGACGAGAAGAAAATTTAATCAGTTTGCGGTGTAATG TGTGGCTCGATCAATCCTGACGAAATATCGATGCACAGCGCACTCGATCA AGGCCATGTAGCAGGTAGACATGCCGCACGACTCTGGGGCCATCATCTGC TCGCTGCTGACGTTACGCGCATGAAGTCCTTTTCACAAATCGTGCCCCTT TTGCTCGAACGGAAGTTCCCGGTAAACACTGTGACTGGCGATGTTGCTCG ATGCATCCCCGCTCCGTCCCGCCCTATCTTCACAAATATCTTGACGAACC GTCCAGTCGAGAGTATGAGGTCCTCGTAAGAGACGTGCTGCGGGGCGGAG CTGTGGACGACGCGGGCCGCGCCAAGCTAAGGAACTACCGGATCACCAAG GGAGTAGACTCATTGCATCACCTTTGCGTGCTCGAGAAGATGGGTTGGAC ACTGGACGATCTGGAGGCGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig1363:1171..6092+

>mRNA_H-elongata_contig1363.2563.1 ID=mRNA_H-elongata_contig1363.2563.1|Name=mRNA_H-elongata_contig1363.2563.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2298bp|location=Sequence derived from alignment at H-elongata_contig1363:1171..6092+ (Himanthalia elongata Himel1 dioecious)
CTACCAGGTCATTTATCGCCTTTCTGGAACAAGCGGCGTAATATCTCATT
GTTGGGGAGGCGCCTGTTTCGTATAAGCCTCAGCGAGGCAGCGGGCCATC
TTTCCTTCATATTCCTCGGCCTCGGGTTTCTCGAGACCGATCTTCTGTCA
TTACGAGTCTACGCCGCGGCGGCTACCAGGTCATTTATCGCCTTTCTGGA
ACAAGCGGCGTAATATCTCATTGTTGGGGAGGCGCCTGTTTCGTATAAGC
CTCAGCGAGGCAGCGGGCCATCTTTCCTTCATATTCCTCGGCCTCGGGTT
TCTCGAGACCGATCTTCTGTCATTACGAGTCTACGCCGCGGCGGGAATCT
CGTGCAGCATCGCGTTCCAGTATTTTCGCCTTCAGCCGCTCTGGATCCCG
ATTTCGTGGAATACCGTCTTTCTCGGCATCAACGCCGGCATGGTGGCCCT
CCTCCTGAAAGAGCAACACGACGCCAGGCAGCAGGACCAGGAGGATGCCA
CCCTTTACGATGAGGCGAGAGGGAGGGGGATGAGGGGAGATTGGGGAGAA
TCTCGTGCAGCATCGCGTTCCAGTATTTTCGCCTTCAGCCGCTCTGGATC
CCGATTTCGTGGAATACCGTCTTTCTCGGCATCAACGCCGGCATGGTGGC
CCTCCTCCTGAAAGAGCAACACGACGCCAGGCAGCAGGACCAGGAGGATG
CCACCCTTTACGATGAGGCGAGAGGGAGGGGGATGAGGGGAGATTGGGGA
GCCTTTCGAGAGTCCGGACTCACGGCAGTAGACTTCATGAAGATCAAGAG
AATCTCGAAGACGAGCAAACGCGCGTCAGGCCTTTCGAGAGTCCGGACTC
ACGGCAGTAGACTTCATGAAGATCAAGAGAATCTCGAAGACGAGCAAACG
CGCGTCAGGCGATGTGCTGGCGCGACAAGACGTGAAGCAACGAAAGCTGT
ATCTAGTCATTGACGGCGAGCTCGAGGTGTCGAAGGGCGGACAGCCGATC
GCGACCGTTTGCGCAGGGGAGTTCGTCGGAGAGGCGATGTGCTGGCGCGA
CAAGACGTGAAGCAACGAAAGCTGTATCTAGTCATTGACGGCGAGCTCGA
GGTGTCGAAGGGCGGACAGCCGATCGCGACCGTTTGCGCAGGGGAGTTCG
TCGGAGAGATGAGCTTCGTTAGGCACTTGAGAGGAGATTGCTTGGGCGAT
TCGGGAGACTGCCAGTGTACCGCCGTGGCAGACATGAGCTTCGTTAGGCA
CTTGAGAGGAGATTGCTTGGGCGATTCGGGAGACTGCCAGTGTACCGCCG
TGGCAGACGTGACGGTAAAACCAGGGGAGGGAGCCAAGGGCACGTCCTGG
GACTTCAACGAGTTGCGAGATATATTGTCCGACAACCCCAACATGTCCGT
CTGCTTCCACGCCGCTATCGCGAGCGCCATGGCTGCCAAATTGATCGATT
CGCACGACCCAGCCATCAAGTGACGGTAAAACCAGGGGAGGGAGCCAAGG
GCACGTCCTGGGACTTCAACGAGTTGCGAGATATATTGTCCGACAACCCC
AACATGTCCGTCTGCTTCCACGCCGCTATCGCGAGCGCCATGGCTGCCAA
ATTGATCGATTCGCACGACCCAGCCATCAACTCGCAGGGCGTTCTGATGG
ACGGAGTCGTGACCCTCACAGAAAAGGAGGAGTTCAACAAGATACGGAGG
TGGATGGGCGTAGAGTATAAAGCTCGTATTCGGGAGATGGAGGCCACCGG
ATGGAGCGCCAAGGAGTTCGATCAGGGGTTAGTGGATGCGGGCGCGACGA
AGGCTCGCAGGGCGTTCTGATGGACGGAGTCGTGACCCTCACAGAAAAGG
AGGAGTTCAACAAGATACGGAGGTGGATGGGCGTAGAGTATAAAGCTCGT
ATTCGGGAGATGGAGGCCACCGGATGGAGCGCCAAGGAGTTCGATCAGGG
GTTAGTGGATGCGGGCGCGACGAAGGAGTATGAGGTCCTCGTAAGAGACG
TGCTGCGGGGCGGAGCTGTGGACGACGCGGGCCGCGCCAAGCTAAGGAAC
TACCGGATCACCAAGGGAGTAGACTCATTGCATCACCTTTGCGTGCTCGA
GAAGATGGGTTGGACACTGGACGATCTGGAGGCGGGGAGTATGAGGTCCT
CGTAAGAGACGTGCTGCGGGGCGGAGCTGTGGACGACGCGGGCCGCGCCA
AGCTAAGGAACTACCGGATCACCAAGGGAGTAGACTCATTGCATCACCTT
TGCGTGCTCGAGAAGATGGGTTGGACACTGGACGATCTGGAGGCGGGG
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