mRNA_H-elongata_contig13508.2477.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A6H5JQ84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ84_9PHAE) HSP 1 Score: 399 bits (1026), Expect = 5.130e-134 Identity = 206/291 (70.79%), Postives = 231/291 (79.38%), Query Frame = 1
Query: 1 KTPSNRRGGWPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPK-----RKRDVLDKVLDSLEPGEWGRAAVLQAR 858
+T + RG PVLG A KL GAPWDTMT WA+EYGSIY+F +FG NVV+SDPS+MKEVMR K++KYHKD++ AYRPFL LLGTGIVTSDG KWR+QRNKVSAAFRIEVLS VPGMAQRAVARLA++LD S+EIGEEMRHLTLQVISEALMSL+ EEADGTFA VYMPIVVEGH RTWNPLRRF PLLPAWWAH+KNQRILNDY+TGIIR RW+ I++E + NGV+ G G G A+G RKRD+LDKVLDSLEPGEWG AAVLQ R
Sbjct: 68 RTVPSLRGTLPVLGPALKLAEGAPWDTMTRWAQEYGSIYKFSLFGNVNVVLSDPSFMKEVMRTKISKYHKDVDFAYRPFLSLLGTGIVTSDGPKWRKQRNKVSAAFRIEVLSAVPGMAQRAVARLAKRLDEAEEANESMEIGEEMRHLTLQVISEALMSLTAEEADGTFAKVYMPIVVEGHKRTWNPLRRFCPLLPAWWAHIKNQRILNDYVTGIIRARWEIIRKERNQAAAAT-----NGVAEG--KGLGGTADGKDSHAHLGRKRDILDKVLDSLEPGEWGSAAVLQIR 351
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A7S2Y0F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F8_9STRA) HSP 1 Score: 257 bits (656), Expect = 9.410e-80 Identity = 133/259 (51.35%), Postives = 177/259 (68.34%), Query Frame = 1
Query: 82 MTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLEPGEWGRAAVLQAR 858
MT WA+ YG IY+F +FGK V V+DPS +K V+ +++K+HKD + YRPF+ LLGTG+VTS+G WRRQR+ VSAAFRI +L EV M++RAVARL++KL+ G S+EIGEE RHLTLQVISEALMSL P E+D TFA++Y+PIV EGH+R W P R + P PAW++++ N + LN YIT II +R++ IQEE GSG R++D+LD+V+ ++ GEWG+AAV Q R
Sbjct: 1 MTEWAQTYGPIYQFHLFGKRCVGVADPSLLKTVLNTEMSKFHKDRDFTYRPFMSLLGTGLVTSEGPLWRRQRSLVSAAFRIHILEEVAHMSRRAVARLSKKLEKIRGTRESIEIGEEFRHLTLQVISEALMSLPPGESDTTFASLYLPIVTEGHLRIWYPYREYLPT-PAWFSYISNVKKLNAYITSIIEKRYELIQEEK---------------------GSGK----PSSRRQDILDRVIGAIPEGEWGQAAVKQLR 233
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A4D9D5T7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5T7_9STRA) HSP 1 Score: 250 bits (639), Expect = 7.250e-77 Identity = 130/280 (46.43%), Postives = 172/280 (61.43%), Query Frame = 1
Query: 22 GGWPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQ-EENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLEPGEWGRAAVLQAR 858
GG GQ +L+ PWD M W G IYRF +FG+ VVV+DP ++EV++ + + KD+ Y+PF+PLLGTG+VTS+G+ W QR VS+ FRIE+L +P +A+RAV RL KL+ G +VEIGE RHLTLQVI+EA++SLSPEE+D TFA +Y+PIV EG+ RTW P R + P PA+WA K+ ++LNDYIT II +RW Q E H P S A P R+ D+LD++L + P WG A V Q R
Sbjct: 8 GGLLFFGQVLELIRLPPWDLMVQWMERLGPIYRFTLFGESCVVVADPRLLREVLQTSMKAFQKDLGFTYKPFMPLLGTGLVTSEGQLWYTQRAMVSSVFRIEILEIIPDIAKRAVERLCTKLESVRNTGQAVEIGEMFRHLTLQVIAEAVLSLSPEESDQTFARMYLPIVTEGNRRTWYPHRAYLPT-PAFWAFRKDVKVLNDYITSIIEKRWQLRQCEAKEPSHPPXXAS----------------AASPPHRQHDILDRILGGVHPKTWGSATVRQIR 270
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A482SY07_9ARCH (Cytochrome P450 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY07_9ARCH) HSP 1 Score: 240 bits (613), Expect = 8.150e-73 Identity = 122/280 (43.57%), Postives = 171/280 (61.07%), Query Frame = 1
Query: 19 RGGWPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLEPGEWGRAAVLQAR 858
+GG P G A ++ G+PWDTM WAREYG+I RF +FG E V ++DP +K V++ K++ + KD E Y+PF+ LLG GIVTS+G+ W RQR +++ + ++L+ +P + +AV RL KL+ VE+ EE RHLTLQVI EAL+SLSPEE D TFA +Y+PIV EG++RTW+P R + P PA++ H K+ + LNDY+T +I +RW E N + + G K DVLDK+L S+ EWG A + Q R
Sbjct: 30 KGGLPFFGHAFIMMKGSPWDTMAEWAREYGTICRFHLFGSEAVCIADPQALKTVLQTKLSSFKKDTEWTYKPFMVLLGNGIVTSEGQSWHRQRRLLASYLKFDILNVIPSITVKAVQRLIRKLEKAREDKQVVEMAEEFRHLTLQVIGEALLSLSPEECDETFAVMYLPIVQEGNLRTWDPTRMYLPT-PAFFQHQKDVKRLNDYVTSLITKRW----EHNNHLK----------------------SLGKDKDNNDVLDKILGSITDEEWGTAVIEQVR 282
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: D7FTJ3_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ3_ECTSI) HSP 1 Score: 228 bits (580), Expect = 3.670e-69 Identity = 124/175 (70.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 349 MAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPK-----RKRDVLDKVLDSLEPGEWGRAAVLQAR 858
M+QRAVARLA++LD S+EIGEEMRHLTLQVISEALMSL+ EEADGTFA VYMPIVVEGHMRTWNPLRRF PLLP WWAH+KNQRILNDYITGIIR RW+ I++E + AG + NGV+ D NGSG A+G RKRD+LDKVLDSLEPGEWG AAVLQ R
Sbjct: 1 MSQRAVARLAKRLDEAEEANESMEIGEEMRHLTLQVISEALMSLTAEEADGTFAKVYMPIVVEGHMRTWNPLRRFCPLLPGWWAHIKNQRILNDYITGIIRARWEIIRKERDQA---AGAT--NGVA--DGNGSGGTADGKDSYPHLGRKRDILDKVLDSLEPGEWGSAAVLQIR 168
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A7S1I6B7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I6B7_9EUGL) HSP 1 Score: 205 bits (521), Expect = 4.730e-59 Identity = 114/271 (42.07%), Postives = 156/271 (57.56%), Query Frame = 1
Query: 22 GGWPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLEPGEWG 834
GG P+ GQA L PWD M W GS RF +F K+ VV++DP+ +K V + + Y KD + AY PFLPLLG+G+VTS+G+ W++QR VS FR+E+L E+ GMA+RAV RL LD G G ++I R+LTLQVI EAL+S+S EEAD F +Y+PI+ E + R P R+F P P WA + + LN YI G++R R D +E S+G +P R+ D+LD++LD L +WG
Sbjct: 45 GGLPLFGQALTLATHTPWDVMQTWYENKGSPVRFTVFNKQMVVIADPADLKSVWQTNLKAYSKDRDFAYGPFLPLLGSGLVTSEGELWKKQRLMVSCVFRVEILDEIVGMAKRAVDRLCTTLDQYKGTGNPIDIEVHFRNLTLQVIGEALLSMSHEEADRVFPELYLPIMEEANRRVLQPWRKFLPT-PTNWAFERRVKELNKYIIGLLRARRDKRAQEV--------------ASSGKV---------APDRRVDILDRILDQLGD-DWG 290
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A6U5M9T4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5M9T4_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.920e-57 Identity = 108/255 (42.35%), Postives = 146/255 (57.25%), Query Frame = 1
Query: 55 LVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLE 819
L PWD M W R +G IYRF + G++ V VS P+ +++V++ V KD++ AY+PFL +LGTGIVTS+GK+W RQR V R E+L ++P + R V RL LD A VEI E +RHLTLQVIS A + L P+E+DGTFA +Y+PIV EG+ R W P R + PA+W HL R LN Y++ +I RRW E RR G +R++DVLD VL++ +
Sbjct: 118 LAGLTPWDLMVRWHRVHGPIYRFILLGRDCVSVSSPAMLRQVLQTNVAGVKKDVDFAYKPFLSILGTGIVTSEGKEWLRQRLSVGKVLRHEILDDIPHITLRMVRRLCLTLDEAAASQSPVEISELLRHLTLQVISNAFLGLDPDESDGTFAIMYLPIVDEGNRRVWAPHRAYMVWTPAFWRHLAAVRRLNGYVSSLIMRRW-----EERRTSSIEG-----------------------RRRKDVLDHVLNAYK 344
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A1Z5J698_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J698_FISSO) HSP 1 Score: 197 bits (502), Expect = 1.090e-55 Identity = 101/264 (38.26%), Postives = 148/264 (56.06%), Query Frame = 1
Query: 28 WPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLE 819
+P+LGQA + PWD +T W YG I F + GK ++DP +K V+++K++ KD+ Y+ FL +LG GIVTS+ + W QR K+S R ++L+++P +A+ L + +D V +GE +RHLTLQVIS A +SLS EE+D TFA +YMPIV E + R W+P R + LP WW + +N R LN Y++ +IR RW + E + EGS +R++DVLD+VL E
Sbjct: 87 YPILGQALNFLRYRPWDLLTTWHLAYGPIVCFTLLGKTMFSIADPVLLKYVLQSKISHVKKDVHNTYKHFLVILGQGIVTSEDQSWMHQRLKMSQPLRSDILTQIPAQTLKALQNLMKTMDHAVETQQPVPLGESLRHLTLQVISGAFLSLSAEESDSTFARIYMPIVDESNQRVWHPYRAWLIGLPFWWEYQRNVRKLNTYVSHLIRTRWTLRRREEK--------------------------EGSSEREKDVLDRVLQVYE 324
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A7S3UBF2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UBF2_9CHLO) HSP 1 Score: 193 bits (491), Expect = 1.700e-54 Identity = 107/273 (39.19%), Postives = 154/273 (56.41%), Query Frame = 1
Query: 22 GGWPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHL---KNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRKRDVLDKVLDSLEPGEW 831
GG P+LG L+ PWD T W E I RF IFG++ VVV++P ++K + ++ + Y KD+ Y+PFLPLLGTG+VTS+G+ WR+QR VS FRI++L E+ GMA+RAV RL+ +L+ +V++ E R L LQVI EALM L+P+E D F +Y+PI+ E + R P R + P W H+ +N L+ YI G+IR+R + E ++ + + RK D+LD+VLD L EW
Sbjct: 53 GGLPILGHGITLLRQTPWDLFTKWVVEISPIIRFNIFGEQFVVVAEPKFLKSIWQSNIRAYTKDMTFTYKPFLPLLGTGLVTSEGELWRKQRLLVSTVFRIDILEEIVGMAKRAVDRLSLQLEKVRNTKETVDLEELFRRLALQVIGEALMGLTPQECDDVFPKLYLPIMEEANKRVLRPWRMYLPS----WTHVEFSRNVTALDKYIVGLIRKRRQLRKHEVKQC-----------------------GKAAAARKFDILDRVLDHLGE-EW 297
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Match: A0A5B8MCE0_9CHLO (Cytochrome P450 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCE0_9CHLO) HSP 1 Score: 190 bits (483), Expect = 1.960e-53 Identity = 106/266 (39.85%), Postives = 154/266 (57.89%), Query Frame = 1
Query: 31 PVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVVSDPSYMKEVMRNKVTKYHKDIETAYRPFLPLLGTGIVTSDGKKWRRQRNKVSAAFRIEVLSEVPGMAQRAVARLAEKLDMEAGRGGSVEIGEEMRHLTLQVISEALMSLSPEEADGTFATVYMPIVVEGHMRTWNPLRRFFPLLPAWWAHLKNQRILNDYITGIIRRRWDCIQEENRRMHCPAGGSRGNGVSTGDANGSGNGAEGSPKRK---RDVLDKVLDSLE 819
P+LG A L+N PWD W G + R I K+ V+V DP+ +K V ++K +Y KD++ +Y PF+ LLGTG+VT++GK WRRQR+ VS FR+E+L E+ G++ + RLA+KLD G G V + EE RHLTLQVI EA++S+ EEAD F +Y+PI+ E + R+ P R + P W+ H + L+ YI ++R RW +RR GDANG AE + K D++DK++D ++
Sbjct: 51 PLLGHALTLMNNVPWDKFCEWKSRCGPVVRVSIMHKDLVLVDDPALLKHVFQSKSQRYCKDVDFSYYPFMCLLGTGLVTAEGKLWRRQRSMVSVHFRVEILDEIVGISMKGAMRLAKKLDGFKGTGKPVALAEEFRHLTLQVIGEAILSMPHEEADRVFPLLYLPIMEEANKRSLRPWREYIPNR-EWFGHKRRIAQLDAYIKDLLRDRW------SRRY--------------GDANG----AEAPVQSKIPAGDIIDKIMDDVQ 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13508.2477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13508.2477.1 >prot_H-elongata_contig13508.2477.1 ID=prot_H-elongata_contig13508.2477.1|Name=mRNA_H-elongata_contig13508.2477.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp KTPSNRRGGWPVLGQAPKLVNGAPWDTMTAWAREYGSIYRFRIFGKENVVback to top mRNA from alignment at H-elongata_contig13508:276..4056+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13508.2477.1 ID=mRNA_H-elongata_contig13508.2477.1|Name=mRNA_H-elongata_contig13508.2477.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3781bp|location=Sequence derived from alignment at H-elongata_contig13508:276..4056+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13508:276..4056+ >mRNA_H-elongata_contig13508.2477.1 ID=mRNA_H-elongata_contig13508.2477.1|Name=mRNA_H-elongata_contig13508.2477.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig13508:276..4056+ (Himanthalia elongata Himel1 dioecious)back to top |