mRNA_H-elongata_contig134825.2463.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 141 bits (356), Expect = 3.510e-37 Identity = 68/89 (76.40%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 4 VSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELG 270
V +ILFVFLPILIFESAF TDVHIFQR+FWQV+ LAGPGV IAT +TA +KYVFPY W W+ LMLGG+LSATDPVAVVALLK+LG
Sbjct: 8 VDSQIILFVFLPILIFESAFETDVHIFQREFWQVVTLAGPGVAIATIITASIVKYVFPYGWDWNLSLMLGGILSATDPVAVVALLKDLG 96
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 130 bits (327), Expect = 4.190e-33 Identity = 62/94 (65.96%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 7 SPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGELA 288
+P +I + LPILIFESAF TDVHIF R+ WQVL+LAGPGV+ AT + A F KYVFPYDW W+ L G M SATDPVAVVAL+KELG LA
Sbjct: 46 NPEIIFYALLPILIFESAFFTDVHIFLREMWQVLVLAGPGVLAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLA 139
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 129 bits (325), Expect = 7.510e-33 Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 7 SPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGELA 288
P +I + LPILIFESAF TDVHIF R+ WQVL+LAGPGV+ AT + A F KYVFPYDW W+ L G M SATDPVAVVAL+KELG LA
Sbjct: 113 DPEIIFYALLPILIFESAFFTDVHIFLREMWQVLVLAGPGVMAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLA 206
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: A0A7S2SQN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQN5_9STRA) HSP 1 Score: 125 bits (315), Expect = 8.770e-33 Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 1
Query: 4 VSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELG 270
VSP VILF F+PIL+FES+F+TDVHI + + QVL LAGPGVI++T LTA F+KYVF Y W W+ L+ G M+SATDPVAVVAL K+LG
Sbjct: 131 VSPEVILFAFIPILLFESSFSTDVHIIRHEALQVLFLAGPGVIVSTFLTALFVKYVFNYGWSWTLCLLFGSMMSATDPVAVVALFKDLG 219
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: A0A1Y5DAQ5_9GAMM (Peptidase (Fragment) n=1 Tax=Bermanella sp. 47_1433_sub80_T6 TaxID=1856278 RepID=A0A1Y5DAQ5_9GAMM) HSP 1 Score: 124 bits (311), Expect = 1.400e-32 Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 1
Query: 4 VSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGEL 285
++PH+IL++FLPILIFESAF +VH+F+R F Q+ +LA PG+++ATA+TA +KY+FP+DW W M G ++SATDPVAVVALLKEL R L
Sbjct: 71 INPHLILWLFLPILIFESAFALEVHLFRRIFSQIALLAVPGLMVATAITAVLVKYIFPWDWSWPVCFMFGALISATDPVAVVALLKELSSRKRL 164
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: UPI00117DD010 (sodium:proton antiporter n=1 Tax=Catenovulum sediminis TaxID=1740262 RepID=UPI00117DD010) HSP 1 Score: 125 bits (313), Expect = 2.670e-31 Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 4 VSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGEL 285
+ PH+ILF+FLP LIFESA++ + H+F+R F Q+ +LA PG+II+T LTA F+KYVFP+DW W+ M G ++SATDPVAVVALLKEL R L
Sbjct: 70 IDPHLILFLFLPTLIFESAYSIETHLFKRTFNQISLLAVPGLIISTTLTAAFVKYVFPWDWSWTVCFMFGALISATDPVAVVALLKELSSRKRL 163
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: A0A5A8DG13_CAFRO (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DG13_CAFRO) HSP 1 Score: 124 bits (310), Expect = 8.200e-31 Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1
Query: 1 HVSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGEL 285
++ PH IL VFLP LIFESAF+ D HIF+R FWQ+ ILA PG+ I T LTA Y+FPY W W A LM G +L+ATDPVAVVALLKELG +L
Sbjct: 87 NIDPHTILVVFLPTLIFESAFSVDFHIFRRSFWQLFILAVPGMAIGTGLTAAVGVYLFPYQWSWEASLMFGSILAATDPVAVVALLKELGASKQL 181
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN) HSP 1 Score: 123 bits (308), Expect = 1.410e-30 Identity = 60/89 (67.42%), Postives = 70/89 (78.65%), Query Frame = 1
Query: 7 SPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFP-YDWGWSAVLMLGGMLSATDPVAVVALLKELG 270
+P VIL+ F+PIL+FESAF TD HIF RQ WQ+L LAGPGV++A+ LT F+K VF Y W W VLM G M+SATDPVAVVALLKELG
Sbjct: 59 TPQVILYCFVPILVFESAFMTDTHIFSRQKWQILTLAGPGVLVASILTGGFVKAVFTDYGWDWPTVLMFGAMMSATDPVAVVALLKELG 147
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: W7QFK9_9ALTE (NhaP-type Na+/H+ and K+/H+ antiporter n=2 Tax=Catenovulum agarivorans TaxID=1172192 RepID=W7QFK9_9ALTE) HSP 1 Score: 122 bits (307), Expect = 1.770e-30 Identity = 55/94 (58.51%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 4 VSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGEL 285
+ PH+ILF+FLP LIFESA+ + H+F+R F Q+ +LA PG+I+ T++TA F+KYVFP+DW W M G ++SATDPVAVVALLKEL R L
Sbjct: 70 IDPHLILFLFLPTLIFESAYAIETHLFKRTFSQIALLAVPGLIVCTSITAVFVKYVFPWDWSWPICFMFGALISATDPVAVVALLKELSSRKRL 163
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Match: UPI001EF3AC7F (cation:proton antiporter n=1 Tax=Vibrio sp. Of7-15 TaxID=2724879 RepID=UPI001EF3AC7F) HSP 1 Score: 121 bits (304), Expect = 5.160e-30 Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 1
Query: 4 VSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTAFFIKYVFPYDWGWSAVLMLGGMLSATDPVAVVALLKELGERGEL 285
+SPH+I+FVFLP LIFESAF +VH+F+R F Q+ +LA PG+++AT LTA K+VFP+DW W+ + G ++SATDPVAVVALLKE+ R L
Sbjct: 71 ISPHIIMFVFLPTLIFESAFAMEVHLFRRMFTQIALLAIPGLLLATTLTASLAKWVFPWDWSWALCFLFGALISATDPVAVVALLKEVSSRKRL 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134825.2463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig134825.2463.1 >prot_H-elongata_contig134825.2463.1 ID=prot_H-elongata_contig134825.2463.1|Name=mRNA_H-elongata_contig134825.2463.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp HVSPHVILFVFLPILIFESAFNTDVHIFQRQFWQVLILAGPGVIIATALTback to top mRNA from alignment at H-elongata_contig134825:516..1119- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig134825.2463.1 ID=mRNA_H-elongata_contig134825.2463.1|Name=mRNA_H-elongata_contig134825.2463.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=604bp|location=Sequence derived from alignment at H-elongata_contig134825:516..1119- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig134825:516..1119- >mRNA_H-elongata_contig134825.2463.1 ID=mRNA_H-elongata_contig134825.2463.1|Name=mRNA_H-elongata_contig134825.2463.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig134825:516..1119- (Himanthalia elongata Himel1 dioecious)back to top |