mRNA_H-elongata_contig13443.2444.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13443.2444.1
Unique NamemRNA_H-elongata_contig13443.2444.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: D8LL37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL37_ECTSI)

HSP 1 Score: 559 bits (1441), Expect = 2.550e-194
Identity = 268/355 (75.49%), Postives = 304/355 (85.63%), Query Frame = 1
Query:    1 MTLVSTEARLQSMLPGPERFMTMNLISPGPCTVNKGFTSYGRTVRRLPTRDNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLNRDTNKPDRQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTPLYKEPACVEAEAQLDTIIAADEAA 1065
            M LVSTE +L+SM  GPERFMTMNL+S GPCTV+K  TSYGRTVRRL TRDNHTTAD+DGAQTFVRTSTLTN+P+ + ++DI GT S+RL++DTNKPDRQL  +DIEGS PRNKWL RT R I+PLEPEY LPSF    P+  KFTRDS+DVSDIEGTKS+PLYP  QR N LVDDIEG +SGWKPRHR+ R++AAPLDH  +VSDITGGGF+TRR TNPL PSYR+NGMD+ DDP+K +PR+LPKA+DGPFYPL T DIEGA PGWR +PQ+ PP+EARRHFRNTNFMGDIPGAQADT+K SICT R VNPL+P Y SLDGE L NPQTPLYKEPACVEAEAQLD  IAA+EAA
Sbjct:    1 MALVSTETQLRSMSAGPERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGAQTFVRTSTLTNKPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNKWLFRTTRCIDPLEPEYTLPSFTTAPPIAPKFTRDSHDVSDIEGTKSRPLYPLEQRHNTLVDDIEGAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTQRHVNPLNPVYDSLDGEPLANPQTPLYKEPACVEAEAQLDRSIAAEEAA 355          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: A0A6H5K072_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K072_9PHAE)

HSP 1 Score: 521 bits (1343), Expect = 1.700e-179
Identity = 252/355 (70.99%), Postives = 289/355 (81.41%), Query Frame = 1
Query:    1 MTLVSTEARLQSMLPGPERFMTMNLISPGPCTVNKGFTSYGRTVRRLPTRDNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLNRDTNKPDRQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTPLYKEPACVEAEAQLDTIIAADEAA 1065
            M LVSTE +L+SM  GPERFMTMNL+S GPCTV+K  TSYGRTVRRL TRDNHTTAD+DGA+TFVRTSTLTN+P+ + ++DI GT S+RL++DTNKPDRQL  +DIEGS PRN+W  RT R I+PLEPEY LPSF    P+  KFTRDS+DVSDIEGTKS+                   +SGWKPRHR+ R++AAPLDH  +VSDITGGGF+TRR TNPL PSYR+NGMD+ DDP+K +PR+LPKA+DGPFYPL T DIEGA PGWR +PQ+ PP+EARRHFRNTNFMGDIPGAQADT+K SICT R VNPLDP Y SLDGE L NPQTPLYKEPACVEAEAQLD  IAA+EAA
Sbjct:    1 MALVSTETQLRSMSAGPERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNQWRFRTTRCIDPLEPEYTLPSFTTATPIAPKFTRDSHDVSDIEGTKSRXXXXXXXXXXXXXXXXXXAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTERHVNPLDPVYDSLDGEPLANPQTPLYKEPACVEAEAQLDRSIAAEEAA 355          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: A0A836CFT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT1_9STRA)

HSP 1 Score: 334 bits (856), Expect = 4.430e-107
Identity = 164/329 (49.85%), Postives = 219/329 (66.57%), Query Frame = 1
Query:   43 PGPERFMTMNLISPGPCTVNKGFTSYGRTVRRLPTRDNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLNRDTNKPDRQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTPLYKEPACVEAEA 1029
            P P  + TMNL + G CTV K  TS G TVRRL TRD     DIDGA+T +  + +T RP+L+ ++DI G  S+RL+R++NKPD  LL  D+ G   R +  LRT+R ++PL+P+Y LPS+    P   KF RDSY V DIEGT  KPLY   QR          T+ GWKPRH + R +A PLD++ +V DIT  GF+T+R TNPL P YR  G +I DDP++ +PR+LP  ++ PF+ L T DIEGAQPGW+   Q+ PP+E RRH+RNTN++GDI GA AD+++ +I T+R V+PL+P Y SLDGE +  P +P Y+  A  +A A
Sbjct:    4 PLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 332          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: A0A7S1UJ89_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ89_9STRA)

HSP 1 Score: 251 bits (641), Expect = 5.680e-74
Identity = 146/330 (44.24%), Postives = 188/330 (56.97%), Query Frame = 1
Query:   58 FMTMNLISPGPCTVNKGFTSYGRTVRRLPTRDNHT--TADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLNRDTNKPDRQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFN-VPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTPLYKEPACVEAEAQLD 1038
            + TMN+ + GPCTV         T  RL T+   T  T DIDGA+ F+R +  TN+P+ F+I                                R    L TKR ++PL P Y LPSF   P P    ++ D+  V DI GT SKPLYP  QR NH VDDIEG +SGWKPR+R V +       S DVSDI   GF++ R+T+P  P + +NGM I DD   C P+ LP  ++ PF+ L + DIEGA  GW     ++P +E RRHFRNTNF+GDI GAQ+DT+K +I T R VNPL+P Y SLDG LL  P  P+Y +PA +EA A ++
Sbjct:    9 WQTMNITTSGPCTVE--------TANRLVTKTRATNRTDDIDGAKPFLRYTQFTNKPDSFQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPSRFLSTKRRVDPLVPTYTLPSFRKAPAPEQPHYS-DTMKVEDIAGTHSKPLYPFPQRINHKVDDIEGAQSGWKPRYRNV-FMTEERPSSLDVSDIAKEGFKSTRVTDPNRPVHYVNGMTIQDDLRYCMPKRLPPQKNTPFFSLQSNDIEGAVSGWVPPHALRPAIEDRRHFRNTNFVGDIEGAQSDTVKHTIRTKRNVNPLNPYYRSLDGILLDPPCRPMYHDPAVLEATAHME 328          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: F0YFZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFZ5_AURAN)

HSP 1 Score: 244 bits (622), Expect = 2.230e-70
Identity = 119/227 (52.42%), Postives = 156/227 (68.72%), Query Frame = 1
Query:  313 DIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTP 993
            DIEGS+PR     +T+R +NPL PEY LPS  +  P   KF RD Y +SDIEGT  +  +  AQR  + V DIEG ++GW+PRH +VR +  P+D S +V DI   GF+T R+T+PL P++R+NGM++ DD ++  P+ LPK  DGP   L T DIEGA+ GW+   +M+PP+E RRHFRNTN++GDI GAQ DT+K SI T R  NPL P Y SLDG+LL +P  P
Sbjct:   18 DIEGSKPRPLHF-KTERHVNPLCPEYTLPSCALDMPPVPKFVRDGYGISDIEGTAPRSRFRFAQRETYDVKDIEGAQAGWRPRHERVRREGPPMD-SLNVKDINDIGFKTTRVTDPLRPTHRINGMEVKDDMVRTMPKKLPKPHDGPTLSLYTDDIEGARCGWKPPHEMQPPLEKRRHFRNTNYIGDITGAQPDTVKHSIRTQRETNPLHPAYRSLDGDLLGDPTQP 242          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: A0A7S3ZUA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA3_9STRA)

HSP 1 Score: 238 bits (606), Expect = 7.210e-70
Identity = 138/323 (42.72%), Postives = 190/323 (58.82%), Query Frame = 1
Query:   40 LPG--PERFMTMNLISPGPCTV-NKGFTSYGRTVRRLPTRDNHTTADIDGAQTFVRTSTLT-NRPNLFEISDIPGTTSVRLNRDTNKPD-RQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTP 993
            LPG   +RF TM+L S G CT+ NK         R     +++   DIDGA   ++    T  RP+L+   DI  ++ ++L+    +P+  +   N IEGS+PR +   ++ R  +PL PEY+LP   +  P T KF RD Y V+DI+GT  K                   ++ W+PRH + R +A P D   DV DI   GF T R+T+P+ P Y MNGM+  DDPI+ KPR+LPKA  GP+  L T DI GA+ GWR   +M+PP E RRH+R+TNF+GDI GAQADT++ +I T RR NPL+P Y SLDG++L +P  P
Sbjct:    3 LPGMADDRFQTMSLQSAGACTIANK--------ERPACAHESNYVGDIDGAAPELKYMRYTARRPDLYVTKDIEKSSPMKLHARGPQPNPNEWHNNPIEGSKPR-ETRFKSNRHTDPLAPEYVLPRCKLEKPPTPKFIRDGYTVTDIDGTVPKXXXXXXXXXXXXXXXXXXAQASWRPRHERARREAPPRD-GLDVRDIMDEGFTTTRVTDPMNPHYFMNGMETCDDPIRTKPRALPKAIPGPYRSLYTDDILGAKSGWRPPHEMQPPPEKRRHWRHTNFVGDIGGAQADTVQHTIPTKRRTNPLNPAYRSLDGDILPDPTKP 315          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: A0A2D4CDY6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY6_PYTIN)

HSP 1 Score: 197 bits (500), Expect = 3.600e-53
Identity = 124/296 (41.89%), Postives = 165/296 (55.74%), Query Frame = 1
Query:  103 KGFTSYGRTV-RRLPTRDNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLN---RDTNKPDRQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQP---GWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGE 969
            K F ++ R    + PT   +  +DI GA+  ++     N+P+  E +DIPG+ S  L+   R     DR   L+ IEGS PR     RT R++NP+EPEY LPSF    P+  KF RDSYDVSDI GT  KP      R    VDDI G ++GW P HR+   +  P D   DV+DI    F++ R+T+ L P Y++NGM   DD +   P+ L   R+ P Y   T DI GA P      ++  +  P E RRHFR TN   DI GA ADT+  SI +NRRV+P  P+Y +LDG+
Sbjct:   27 KAFLAHERPPPAKPPTHTTNDISDIAGARPLLKDHVYVNKPHFHEPNDIPGSCSKELHPKHRRVGSDDRFKQLH-IEGSSPRPSGF-RTNRVVNPMEPEYKLPSFQAAPPLIPKFLRDSYDVSDIAGTSFKPKVITNPRSPLRVDDIAGAQAGWLPFHRRASREHPPRD-ILDVADIVNVDFKSSRVTDVLNPVYKVNGMTYQDDALS-HPKLLHPQRNKPSYAXQTADIAGANPFDASKTVVGNI--PNEKRRHFRQTNRTDDITGATADTVMHSIRSNRRVDPTWPDYVALDGQ 316          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: W2QK96_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK96_PHYPN)

HSP 1 Score: 192 bits (488), Expect = 2.420e-51
Identity = 121/294 (41.16%), Postives = 167/294 (56.80%), Query Frame = 1
Query:  109 FTSYGRT--VRRLPTRDNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRL---NRDTNKPDRQLLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQ---PGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDG 966
            F   GR   ++R P R  +   DI G +  ++     N+P+ ++  DI G+TS+ L   N      DR   L  IEG+  R     RT+R++NPL+P Y LPSF    P+  KF RDSY+VSDIEGT  K    Q  R    +DDI G ++GW PRH++   +  P D   +V DIT   F++ R+TN L P Y +NGM ++DDP+    +  PK RD P Y L T DIEGA    P   ++  +   M  RR++R+TN   DI GA+ADTL  SI + RRV+P  P+Y++LDG
Sbjct:   26 FMDRGRVPPLKRNPDRVTNDVTDIRGTRPLLKNHMYVNKPHFYDAHDIKGSTSMELHPKNWRAGSEDRFKQL-PIEGTTSRPAGF-RTERVVNPLQPNYKLPSFTKAPPIEPKFLRDSYNVSDIEGTSIKVRDIQHPRDGLKLDDIAGAQAGWLPRHKRGLREHPPRD-ILNVQDITNVDFKSSRVTNVLNPVYTVNGMTVSDDPLSQPLKQHPK-RDKPSYALKTDDIEGASCTDPATAVVAGIV--MAHRRNYRDTNITSDISGAKADTLVHSIRSTRRVDPNAPQYSALDG 313          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: A0A7S3YJZ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJZ2_HETAK)

HSP 1 Score: 173 bits (439), Expect = 4.700e-48
Identity = 75/134 (55.97%), Postives = 102/134 (76.12%), Query Frame = 1
Query:  628 GGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDGELLTNPQTPLYKEPACVEAEA 1029
            GGF+++R+T+PL P Y +NGM + DDP+K +P++LPK ++ PFY L+T+DIEGA+PGWR   ++ PP+ ARRH+RNTNF+GDI GA  DT+  ++ T R VNPL+P Y  LDGE+L NPQTPLY+ P   E  A
Sbjct:    1 GGFKSQRVTDPLRPEYTVNGMAVGDDPVKTRPKALPKGKNEPFYSLVTEDIEGARPGWRPPAEVFPPLSARRHWRNTNFVGDIDGAAPDTVAHAVRTERVVNPLNPAYVGLDGEVLENPQTPLYRAPGVAEGRA 134          
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Match: G4Z4F7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F7_PHYSP)

HSP 1 Score: 182 bits (463), Expect = 8.160e-48
Identity = 121/284 (42.61%), Postives = 158/284 (55.63%), Query Frame = 1
Query:  136 RLPTRDNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLNRDTNKP--DRQLLLNDIEG--SQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSYDVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDHSFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDGPFYPLITKDIEGAQ---PGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTLKRSICTNRRVNPLDPEYTSLDG 966
            R P R  +   DI GA+  ++     N+ + ++  DI G+TS+ L+    +   D +     IEG  SQP      RT R++NPLEP Y LPSF    P+  KF RDSY+VSDIEGT  K    Q  R    VDDI GT+ GW PRH++   +  P D   +V DIT   F++ R+TN L P Y +NGM   DDP+       PK RD P Y L T DIEGA    P   ++  +   M  RR+FR+TN   DI GA+ADTL  SI + RRV+P  P Y++LDG
Sbjct:   37 RHPERATNDVTDILGARPLLKNHVYVNKLHFYDAHDIKGSTSMELHPKNWRAGSDNRFKQLPIEGTTSQPAG---FRTDRVVNPLEPNYKLPSFVKAPPLEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKVDDIAGTQCGWLPRHKRGLRENPPRD-ILNVQDITNVDFRSSRVTNVLNPVYTVNGMTFADDPLSRPLVQHPK-RDKPNYALKTDDIEGASCADPATAIVAGIV--MAHRRNFRDTNVTKDITGAKADTLLHSIRSTRRVDPNAPLYSALDG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13443.2444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL37_ECTSI2.550e-19475.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K072_9PHAE1.700e-17970.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFT1_9STRA4.430e-10749.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UJ89_9STRA5.680e-7444.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YFZ5_AURAN2.230e-7052.42Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZUA3_9STRA7.210e-7042.72Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A2D4CDY6_PYTIN3.600e-5341.89Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
W2QK96_PHYPN2.420e-5141.16Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A7S3YJZ2_HETAK4.700e-4855.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
G4Z4F7_PHYSP8.160e-4842.61Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13443contigH-elongata_contig13443:3444..6633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score561.6
Seed ortholog evalue4.3e-157
Seed eggNOG ortholog2880.D8LL37
EggNOG OGs2C1R0@1,2RZH6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_003400.1
Exons3
Model size1758
Cds size1758
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13443.2444.1prot_H-elongata_contig13443.2444.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13443 3444..6633 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929798.7947352-CDS-H-elongata_contig13443:3443..36631622929798.7947352-CDS-H-elongata_contig13443:3443..3663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13443 3444..3663 -
1691679161.8533332-CDS-H-elongata_contig13443:3443..36631691679161.8533332-CDS-H-elongata_contig13443:3443..3663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13443 3444..3663 -
1622929798.8111272-CDS-H-elongata_contig13443:3804..51021622929798.8111272-CDS-H-elongata_contig13443:3804..5102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13443 3805..5102 -
1691679161.8639205-CDS-H-elongata_contig13443:3804..51021691679161.8639205-CDS-H-elongata_contig13443:3804..5102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13443 3805..5102 -
1622929798.8221416-CDS-H-elongata_contig13443:6393..66331622929798.8221416-CDS-H-elongata_contig13443:6393..6633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13443 6394..6633 -
1691679161.8749478-CDS-H-elongata_contig13443:6393..66331691679161.8749478-CDS-H-elongata_contig13443:6393..6633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13443 6394..6633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13443.2444.1

>prot_H-elongata_contig13443.2444.1 ID=prot_H-elongata_contig13443.2444.1|Name=mRNA_H-elongata_contig13443.2444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=586bp
MTLVSTEARLQSMLPGPERFMTMNLISPGPCTVNKGFTSYGRTVRRLPTR
DNHTTADIDGAQTFVRTSTLTNRPNLFEISDIPGTTSVRLNRDTNKPDRQ
LLLNDIEGSQPRNKWLLRTKRLINPLEPEYILPSFNVPHPVTAKFTRDSY
DVSDIEGTKSKPLYPQAQRRNHLVDDIEGTRSGWKPRHRQVRYDAAPLDH
SFDVSDITGGGFQTRRMTNPLAPSYRMNGMDITDDPIKCKPRSLPKARDG
PFYPLITKDIEGAQPGWRLIPQMKPPMEARRHFRNTNFMGDIPGAQADTL
KRSICTNRRVNPLDPEYTSLDGELLTNPQTPLYKEPACVEAEAQLDTIIA
ADEAAATSTATQEARISNENQWANSSNQEESRQPEHSLENLVKPQASSEP
LLSCPSGSRGRPEASNKGKKVKPMNLRRNDNSPALSSSSSLPRSGKRQWG
INCDVLARQHTDQLRLLRSSSGGMLRERPPTDPLRVADQANGCSNGRGLS
ASSWPRFSSSRRNRDTEKAEGDVDRTRGTEGSAVVVRSRGEHGKQRTERL
VLRSACGTPRVPLSPFERRSAQEYADEIISVHDLL*
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mRNA from alignment at H-elongata_contig13443:3444..6633-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13443.2444.1 ID=mRNA_H-elongata_contig13443.2444.1|Name=mRNA_H-elongata_contig13443.2444.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3190bp|location=Sequence derived from alignment at H-elongata_contig13443:3444..6633- (Himanthalia elongata Himel1 dioecious)
ATGACGCTTGTGAGCACAGAAGCGCGGCTGCAGTCAATGTTACCCGGACC CGAGCGATTTATGACGATGAATCTCATATCCCCGGGGCCTTGTACGGTTA ACAAGGGTTTTACGTCCTACGGAAGAACGGTGCGACGACTACCAACGAGA GATAATCACACGACAGCAGACATTGACGGAGCTCAGACGTTCGTGCGAAC TAGCACTCTCACCAATAGGCCCAACTTATTTGAAATATCGGTGAGTTAGA TTTACTACCATTTTGATATTTTTTTAATTGATTGAATACTCACTTGATTA ATAAGCTGATGTCCAAATCCAGCCCACCACCCGGAAGAAAAACGTTCAGC GTACTCTCAATGTAAAAAGAAACGGCAATAGTGCATCATACTCGGGAAAA ACGACATCTCCAAACAAACAAAAAAGAGGATAGAGTTGTTTTAATCATTT GTATATGGCTATTGGGATACATGCCTACTCAAAGAATGATTCAACCAAAC AGCCACGGATTCAATGAAAGCAAAAAACCCTAATGATGTGCTATCGTCTG TTGACTCTTAGGAATGCAAAGCCTCATAATAATTCCACCGATCATTCGAT TATACATTACGTCGTTTGAGTGTGTCATGTGGAATAAATTCTCCGGGGGT CAACTCACACACTCAGTGTGCTTCTTTGTCGTTAAGTTGTGGGTATATTA TGGAGAAAAAAACACTTGAGTTTGCCGTGAGATGTAATTTCCAAGACATA TCTTAAAAGCTACGAAAAGACAAAATATGATGATTTCTTCAAGACACTAC TTGCGGTTCCAAAAAGTTACAAAACGACAAAGTTTTTTTATTTTTAATCC TACGCCTTGCGTTAGTATCCTCATATTATATAATATCGTACAATACTACG GTATATCAGAGCTCAGGGGAAATCTCTTGAGAGCACATGTACATTGTATG CTAATTGTTGACTGCTCCCTCCGAACCATCTAGTCTACGCGTCCACTTTC TTGGAATAGAGGAATAGAGGATGGATGTTGAGTCGAATAACCTTTCAACT TGTATGTGACATTTGTCATAGCCACCTTGGCGTCATGTCTTTTTATATTT CTCTGTCTTGCCTGATTTACTTTTGTTTTATGTAAAGCAGCGGGCGTTGT GTTAGTTTTTTCTTTTTTTATTCTGCGGCTGCCCATTAGCGCTACTTGGA AAGGGTAAAAACGGATCATTTTTTTTTTAATATATATTGGAAGCGATCAC TTTCAATAATTTAAGAAATCATATAAAAGTTGTGAGGTATTTTGGATGCC ACTACTAAAAGCGTTTGCTTTTACACAAATGAAGCGGCGTGTATCACCCC TAGCACTATATTGTTAACTCCCCTCTCACCATCCACTAGCCCTGGCGATG TTCTAACGGGGGCCGGAACTTACTACGATGTCATGTCTTTACTATTTTTC AAATATAGCGTTCGTTGTTATAAACCCCTTTTGTGGAGCCTTCAAGCTAA CTGCCGCCCCCGCAAACTCACGCGTGTGCAGGACATTCCTGGCACTACAT CCGTTCGGCTGAATAGAGACACCAACAAACCCGACAGACAGCTCCTCCTC AACGACATCGAAGGGAGTCAGCCGAGGAACAAATGGTTGCTCCGAACTAA GCGCTTGATCAACCCCCTGGAACCTGAGTATATCCTCCCTTCGTTTAATG TGCCTCATCCGGTGACTGCGAAGTTCACGCGAGACTCATATGATGTGTCG GACATCGAGGGAACTAAGTCAAAGCCTTTGTATCCACAGGCGCAGCGACG GAACCATCTCGTTGACGATATCGAAGGTACGCGTTCTGGTTGGAAGCCGA GACATCGGCAGGTGCGGTACGACGCTGCCCCGCTAGACCACTCCTTCGAC GTAAGCGACATCACCGGCGGTGGATTTCAGACGCGAAGAATGACGAATCC GCTCGCCCCGTCGTATCGCATGAACGGAATGGACATCACCGATGATCCGA TTAAGTGTAAACCGCGCAGCCTCCCTAAAGCGAGAGATGGCCCGTTCTAT CCCCTCATAACGAAGGACATAGAGGGCGCGCAGCCAGGATGGCGATTGAT ACCACAAATGAAACCACCGATGGAGGCGCGGCGGCATTTCCGGAACACTA ACTTCATGGGGGATATTCCCGGGGCGCAAGCGGACACACTGAAGCGATCC ATCTGCACGAATCGGCGTGTCAATCCCCTGGATCCGGAGTACACGAGTCT TGACGGTGAACTACTTACAAATCCTCAGACGCCCCTGTACAAGGAGCCGG CTTGCGTCGAAGCAGAGGCACAGCTGGATACAATTATCGCCGCCGATGAA GCCGCTGCCACTTCTACCGCAACTCAAGAGGCACGGATTTCCAACGAGAA CCAGTGGGCAAATAGCAGTAACCAGGAAGAGTCCAGGCAACCGGAGCACT CCTTGGAGAACTTGGTGAAACCACAAGCCTCGTCAGAACCCCTGCTTTCA TGTCCCAGTGGTAGCAGGGGTAGACCAGAGGCAAGCAATAAAGGCAAAAA AGTCAAACCAATGAACTTACGGCGAAATGATAACTCGCCTGCGCTCTCCT CCTCTTCCTCTTTACCGCGAAGTGGTAAGAGACAATGGGGCATCAATTGC GACGTCCTTGCTCGGCAACACACGGACCAATTACGATTGCTTCGGAGTAG CAGTGGAGGGATGCTGCGGGAGAGGCCACCAACCGATCCTCTCCGTGTCG CCGATCAGGCCAATGGCTGCAGCAACGGCAGAGGACTGTCGGCGAGCTCG TGGCCAAGATTTTCGTCAAGCCGACGGAAGTCTCGGCACGGCGTATACAC ACTTGCAAACCGAGAACTTTCACGATCCTCGGAGATACGATCGACAGCCA GGCTTTCTAGCAATCAAGTAGCCAGCAGTGTCCCTCGTTGCGTGCCCTTG AGCCGCAGTCAGAACGCCAGCAGAGACACGGAAAAAGCGGAAGGCGATGT CGATCGGACACGCGGGACGGAAGGCAGCGCCGTGGTAGTACGATCTCGCG GCGAGCACGGCAAGCAGCGTACGGAGAGGCTGGTGTTACGGAGCGCGTGC GGGACGCCACGCGTGCCCTTGAGTCCTTTTGAGAGGAGATCAGCGCAAGA GTATGCGGATGAAATTATCTCCGTGCACGACCTTCTCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig13443:3444..6633-

>mRNA_H-elongata_contig13443.2444.1 ID=mRNA_H-elongata_contig13443.2444.1|Name=mRNA_H-elongata_contig13443.2444.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3516bp|location=Sequence derived from alignment at H-elongata_contig13443:3444..6633- (Himanthalia elongata Himel1 dioecious)
ATGACGCTTGTGAGCACAGAAGCGCGGCTGCAGTCAATGTTACCCGGACC
CGAGCGATTTATGACGATGAATCTCATATCCCCGGGGCCTTGTACGGTTA
ACAAGGGTTTTACGTCCTACGGAAGAACGGTGCGACGACTACCAACGAGA
GATAATCACACGACAGCAGACATTGACGGAGCTCAGACGTTCGTGCGAAC
TAGCACTCTCACCAATAGGCCCAACTTATTTGAAATATCGATGACGCTTG
TGAGCACAGAAGCGCGGCTGCAGTCAATGTTACCCGGACCCGAGCGATTT
ATGACGATGAATCTCATATCCCCGGGGCCTTGTACGGTTAACAAGGGTTT
TACGTCCTACGGAAGAACGGTGCGACGACTACCAACGAGAGATAATCACA
CGACAGCAGACATTGACGGAGCTCAGACGTTCGTGCGAACTAGCACTCTC
ACCAATAGGCCCAACTTATTTGAAATATCGGACATTCCTGGCACTACATC
CGTTCGGCTGAATAGAGACACCAACAAACCCGACAGACAGCTCCTCCTCA
ACGACATCGAAGGGAGTCAGCCGAGGAACAAATGGTTGCTCCGAACTAAG
CGCTTGATCAACCCCCTGGAACCTGAGTATATCCTCCCTTCGTTTAATGT
GCCTCATCCGGTGACTGCGAAGTTCACGCGAGACTCATATGATGTGTCGG
ACATCGAGGGAACTAAGTCAAAGCCTTTGTATCCACAGGCGCAGCGACGG
AACCATCTCGTTGACGATATCGAAGGTACGCGTTCTGGTTGGAAGCCGAG
ACATCGGCAGGTGCGGTACGACGCTGCCCCGCTAGACCACTCCTTCGACG
TAAGCGACATCACCGGCGGTGGATTTCAGACGCGAAGAATGACGAATCCG
CTCGCCCCGTCGTATCGCATGAACGGAATGGACATCACCGATGATCCGAT
TAAGTGTAAACCGCGCAGCCTCCCTAAAGCGAGAGATGGCCCGTTCTATC
CCCTCATAACGAAGGACATAGAGGGCGCGCAGCCAGGATGGCGATTGATA
CCACAAATGAAACCACCGATGGAGGCGCGGCGGCATTTCCGGAACACTAA
CTTCATGGGGGATATTCCCGGGGCGCAAGCGGACACACTGAAGCGATCCA
TCTGCACGAATCGGCGTGTCAATCCCCTGGATCCGGAGTACACGAGTCTT
GACGGTGAACTACTTACAAATCCTCAGACGCCCCTGTACAAGGAGCCGGC
TTGCGTCGAAGCAGAGGCACAGCTGGATACAATTATCGCCGCCGATGAAG
CCGCTGCCACTTCTACCGCAACTCAAGAGGCACGGATTTCCAACGAGAAC
CAGTGGGCAAATAGCAGTAACCAGGAAGAGTCCAGGCAACCGGAGCACTC
CTTGGAGAACTTGGTGAAACCACAAGCCTCGTCAGAACCCCTGCTTTCAT
GTCCCAGTGGTAGCAGGGGTAGACCAGAGGCAAGCAATAAAGGCAAAAAA
GTCAAACCAATGAACTTACGGCGAAATGATAACTCGCCTGCGCTCTCCTC
CTCTTCCTCTTTACCGCGAAGTGGTAAGAGACAATGGGGCATCAATTGCG
ACGTCCTTGCTCGGCAACACACGGACCAATTACGATTGCTTCGGAGTAGC
AGTGGAGGGATGCTGCGGGAGAGGCCACCAACCGATCCTCTCCGTGTCGC
CGATCAGGCCAATGGCTGCAGCAACGGCAGAGGACTGTCGGCGAGCTCGT
GGCCAAGATTTTCGTCAAGCCGACGGAAGACATTCCTGGCACTACATCCG
TTCGGCTGAATAGAGACACCAACAAACCCGACAGACAGCTCCTCCTCAAC
GACATCGAAGGGAGTCAGCCGAGGAACAAATGGTTGCTCCGAACTAAGCG
CTTGATCAACCCCCTGGAACCTGAGTATATCCTCCCTTCGTTTAATGTGC
CTCATCCGGTGACTGCGAAGTTCACGCGAGACTCATATGATGTGTCGGAC
ATCGAGGGAACTAAGTCAAAGCCTTTGTATCCACAGGCGCAGCGACGGAA
CCATCTCGTTGACGATATCGAAGGTACGCGTTCTGGTTGGAAGCCGAGAC
ATCGGCAGGTGCGGTACGACGCTGCCCCGCTAGACCACTCCTTCGACGTA
AGCGACATCACCGGCGGTGGATTTCAGACGCGAAGAATGACGAATCCGCT
CGCCCCGTCGTATCGCATGAACGGAATGGACATCACCGATGATCCGATTA
AGTGTAAACCGCGCAGCCTCCCTAAAGCGAGAGATGGCCCGTTCTATCCC
CTCATAACGAAGGACATAGAGGGCGCGCAGCCAGGATGGCGATTGATACC
ACAAATGAAACCACCGATGGAGGCGCGGCGGCATTTCCGGAACACTAACT
TCATGGGGGATATTCCCGGGGCGCAAGCGGACACACTGAAGCGATCCATC
TGCACGAATCGGCGTGTCAATCCCCTGGATCCGGAGTACACGAGTCTTGA
CGGTGAACTACTTACAAATCCTCAGACGCCCCTGTACAAGGAGCCGGCTT
GCGTCGAAGCAGAGGCACAGCTGGATACAATTATCGCCGCCGATGAAGCC
GCTGCCACTTCTACCGCAACTCAAGAGGCACGGATTTCCAACGAGAACCA
GTGGGCAAATAGCAGTAACCAGGAAGAGTCCAGGCAACCGGAGCACTCCT
TGGAGAACTTGGTGAAACCACAAGCCTCGTCAGAACCCCTGCTTTCATGT
CCCAGTGGTAGCAGGGGTAGACCAGAGGCAAGCAATAAAGGCAAAAAAGT
CAAACCAATGAACTTACGGCGAAATGATAACTCGCCTGCGCTCTCCTCCT
CTTCCTCTTTACCGCGAAGTGGTAAGAGACAATGGGGCATCAATTGCGAC
GTCCTTGCTCGGCAACACACGGACCAATTACGATTGCTTCGGAGTAGCAG
TGGAGGGATGCTGCGGGAGAGGCCACCAACCGATCCTCTCCGTGTCGCCG
ATCAGGCCAATGGCTGCAGCAACGGCAGAGGACTGTCGGCGAGCTCGTGG
CCAAGATTTTCGTCAAGCCGACGGAACAGAGACACGGAAAAAGCGGAAGG
CGATGTCGATCGGACACGCGGGACGGAAGGCAGCGCCGTGGTAGTACGAT
CTCGCGGCGAGCACGGCAAGCAGCGTACGGAGAGGCTGGTGTTACGGAGC
GCGTGCGGGACGCCACGCGTGCCCTTGAGTCCTTTTGAGAGGAGATCAGC
GCAAGAGTATGCGGATGAAATTATCTCCGTGCACGACCTTCTCTGACAGA
GACACGGAAAAAGCGGAAGGCGATGTCGATCGGACACGCGGGACGGAAGG
CAGCGCCGTGGTAGTACGATCTCGCGGCGAGCACGGCAAGCAGCGTACGG
AGAGGCTGGTGTTACGGAGCGCGTGCGGGACGCCACGCGTGCCCTTGAGT
CCTTTTGAGAGGAGATCAGCGCAAGAGTATGCGGATGAAATTATCTCCGT
GCACGACCTTCTCTGA
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