mRNA_H-elongata_contig13375.2396.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A6H5JGV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV1_9PHAE) HSP 1 Score: 370 bits (951), Expect = 4.170e-126 Identity = 187/285 (65.61%), Postives = 222/285 (77.89%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNK----TLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRR-GKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCDKDTFASLRADFVAGLCEDQQERKTLRPLLDVISYCQRTHSGK 840
G FPLLSDEWC MA LGRIA++S+AEA+L ++ E+K K TLWEGEE+ALRYVLEDGKLN+CLRNL + R+FHRNRR G ++ P +LD+FE+G+GTVLRNAWTH+EALQTTDIPLLVEYVTGV R+AA++P +E M RGDL RQE+VCLSYLRGLVSCLS+Y+EGRVMPH+R A T + L +MLHANH HLGM+ A VGA+ALAFV TEDF TYR EYI++ + FASL+ DFV LCED QERK LRPLLD ISYC+R S K
Sbjct: 38 GAFPLLSDEWCKMATALGRIAEISEAEARLTQDCIEGERKEGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMSLRGDLAGRQEIVCLSYLRGLVSCLSDYEEGRVMPHLRGAETVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYREEYINDAARVAFASLKEDFVEKLCEDSQERKILRPLLDAISYCRRKSSRK 322
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: D7G0I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I2_ECTSI) HSP 1 Score: 318 bits (816), Expect = 8.160e-106 Identity = 164/265 (61.89%), Postives = 195/265 (73.58%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRR-GKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCDKDTFASLRADFVAGLCEDQQERKTLR 792
G FPLLSDEWC MA LGRIA++S+A EE+ALRYVLEDGKLN+CLRNL + R+FHRNRR G ++ P +L++FE+G+GTVLRNAWTH+EALQTTDIPLLVEYVTGV R+AA++P+ +E M RGDL RQE+VCLSYLRGLVS LS+++EGRVMPH+R AGT + L +MLHANH HLGM+ A VGA+ALAFV TEDF TYR EYI + TFASL+ DFV LCED QERK LR
Sbjct: 37 GAFPLLSDEWCKMATALGRIAEISEA------------------------EEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLNSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPDAVEDMSLRGDLAGRQEIVCLSYLRGLVSRLSDHEEGRVMPHLRGAGTVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYREEYIDEATRVTFASLKEDFVEKLCEDSQERKILR 277
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A835YQR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR7_9STRA) HSP 1 Score: 237 bits (604), Expect = 3.120e-73 Identity = 122/264 (46.21%), Postives = 170/264 (64.39%), Query Frame = 1
Query: 37 MARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCDKDTFASLRADFVAGLCEDQQERKTLRPLLDVISYCQRT 828
MA+TLGR+A +++ E+KL R S + +TLWEGEE ALRYV+EDGKLN+CLRNLVD + + R D V+ + +D FE+G+G +LRNAW H+EALQTTD+P LV ++T V +AA+ PER+ ++ D+ DRQEV+C+ YL G+V + E E RVMP +R+AGT L ML + H LG D +G L TEDFATYR++++ D+ F +LR ++ LC+D ++ RPLLD S+C RT
Sbjct: 1 MAQTLGRVASITEMESKLPRAS--------SRQTLWEGEEQALRYVIEDGKLNICLRNLVDFKAYEMKLRS--DDVEPEQRQKDLMDKFEKGMGCMLRNAWNHVEALQTTDMPALVNHITTVFSDAADSPERVAQLT---DITDRQEVLCMYYLHGMVGQMEEMSEERVMPMLRAAGTLVALARMLSSCHAALGRDARELGTVCLGLACGTEDFATYRDKHVPPADRGVFVALRDAYLLDLCQDPDAKRRARPLLDFTSFCVRT 251
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A7S2V4C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C5_9STRA) HSP 1 Score: 233 bits (594), Expect = 2.830e-72 Identity = 125/277 (45.13%), Postives = 175/277 (63.18%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRN-EYISNCD-KDTFASLRADFVAGLCEDQQERKTLRPLLDVISYCQR 825
G+FP+LSD W MA T GRIA++SD E+KL ++S N TLWE EELALRY+LEDGKLN+CLRNLV+ + F R R + + LDAFE+G+G VLRNAW H+EA+QTTD+PLL+ Y+ V+ +A +P R+E ++ G+L RQEVV + YL L++ + E E RVMP ++ + L S++HA+H L +AL+ + TEDF+TY++ EY+ + K+ +SL D + L ED R+ +RPLLD I QR
Sbjct: 35 GSFPVLSDSWNGMADTFGRIANISDMESKLPKDSE--------NATLWECEELALRYLLEDGKLNLCLRNLVEFKNFERELRNAPATLPT--DHRDKLDAFEKGLGCVLRNAWRHVEAIQTTDLPLLINYIGDVMEDAVRNPTRLESFQKAGELEKRQEVVVIYYLASLMTQVDEVSEDRVMPLIKERRLFSLLVSVMHAHHAKLNEGDLLAALKALSLICDTEDFSTYKDTEYLEETEEKEMLSSLHTDVIEDLTEDWDTRRKIRPLLDYIREVQR 301
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: W4FWN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN5_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.480e-57 Identity = 113/274 (41.24%), Postives = 156/274 (56.93%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCDKDTFASLRA---DFVAGLCEDQQERKTLRPLLDVIS 813
G +P+LS EW MAR + R ++S+ E + ++ +N TLWE EELALRY+LEDGKLN+CLR LV+ +++ + D P + + FERG+G +L+NAW H+EALQTTD+PLL+EYV GV+ E P +E+ DL D QE++ + YL GL+ L E RVMP V A L S + + + V + LA + TEDF T+ Y+S+ T LRA D + GL ED RK LRPLLDV++
Sbjct: 35 GDYPVLSAEWREMARNMMRFGEISEMERHMPKQ---------DNATLWECEELALRYILEDGKLNLCLRLLVEYKDYEHG----ISQRDLDPEAKELISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEPAYVEKK----DLVDSQEILVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLASHIQRHWKSFSDTDVIVACEVLALLCDTEDFQTHGPSYVSSAQ--TCRDLRAIQEDILDGLMEDLDMRKKLRPLLDVVN 289
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A1V9ZS11_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS11_9STRA) HSP 1 Score: 193 bits (490), Expect = 9.880e-57 Identity = 114/271 (42.07%), Postives = 154/271 (56.83%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCD-KDTFASLRADFVAGLCEDQQERKTLRPLLDVI 810
G +P+LS+EW MA + R ++S+ E KL ++ N TLWE EELALRY+LEDGKLN+CLR LVD +E+ RN G+ D + L FERG+G +L+NAW H+EALQTTD+PLLVEY+ V+ E PE + DL D QEV+ L YL+GL L + E R+MP V+ + L NH L + V A LA + TEDF T+ YI+ + + ++ + + L D RK LRPLLDV+
Sbjct: 35 GDYPILSEEWKEMANNMTRFGEISEMERKLPKQE---------NATLWECEELALRYILEDGKLNLCLRLLVDYKEYERNTIGR----DFDAEAKELLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIATVLTFCHEEPEFFKSK----DLEDSQEVIVLYYLQGLFKRLEDIGESRIMPLVQERQIFELVLWHLQHNHRSLSPEDTLVAADVLAQICDTEDFQTHPEAYITTAEARQDLLVVQDEVLDELVGDLDIRKRLRPLLDVV 288
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A485L431_9STRA (Aste57867_15868 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L431_9STRA) HSP 1 Score: 191 bits (485), Expect = 5.710e-56 Identity = 110/272 (40.44%), Postives = 151/272 (55.51%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREF-HRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYI-SNCDKDTFASLRADFVAGLCEDQQERKTLRPLLDVI 810
G +P+LS+EW MA + R ++S+ E L ++ N TLWE EELALRY+LEDGKLN+CLR LV+ + + H ++D T+ + FERG+G +L+NAW H+EALQTTD+PLL+EYV V+ E P +E DL D QEV+ + YL GL L E RVMP V+ A L + L N + VGA+ LA + TEDF T+ Y S+ + +++ D + L D RK LRPLLD +
Sbjct: 35 GDYPVLSNEWKEMAHNMRRFGEISEMERNLPKQE---------NATLWECEELALRYILEDGKLNLCLRILVEYKSYEHGTAHREMDA-----ETKEIVAMFERGLGVMLKNAWLHVEALQTTDLPLLIEYVASVLTFCEEEPAYVETK----DLEDSQEVIVMYYLHGLFKQLEHISESRVMPLVQEKNIFALLAAHLQRNWKSFSPSDVRVGAEVLALICDTEDFQTHSESYFPSDQTRRDLGAIQEDILEDLVADLDTRKKLRPLLDTV 288
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A067CKH1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKH1_SAPPC) HSP 1 Score: 189 bits (481), Expect = 2.210e-55 Identity = 110/271 (40.59%), Postives = 154/271 (56.83%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCD-KDTFASLRADFVAGLCEDQQERKTLRPLLDVI 810
G +P+LS EW MAR + R ++S+ E +L ++ N TLWE EELALRY+LEDGKLN+CLR LV+ +E+ RN G+ D + L FERG+G +L+NAW H+EALQTTD+PLLVEY+ V+ E PE + DL D QEV+ L YL GL+ L + E R+MP ++ + L NH D V A+ LA + +EDF T+ Y++ + + ++ + + L D RK LRPLLDV+
Sbjct: 35 GDYPILSTEWKEMARNMTRFGEISEMERQLPKQE---------NATLWECEELALRYILEDGKLNLCLRLLVEYKEYERNTLGR----DFDAEAKDLLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIASVLTFCHEEPEFYKTK----DLEDCQEVIVLYYLHGLMKRLDDIGESRIMPLLQERQVFELVLWHLQHNHTSFSPDDVLVTAEVLAQICDSEDFQTHPTAYVATAEARQDLRVIQEEVLDDLATDLDIRKRLRPLLDVV 288
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A024TTX0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTX0_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.930e-54 Identity = 110/273 (40.29%), Postives = 156/273 (57.14%), Query Frame = 1
Query: 1 GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREF-HRNRRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCD--KDTFASLRADFVAGLCEDQQERKTLRPLLDVI 810
G +P+LS EW MA + R ++S+ E +L + N TLWE EELALRY+LEDGKLN+CLR LV+ +++ H + ++D P T+A + FERG+G +L+NAW H+EALQTTD+PLL+EY+ GV+ E P +E+ DL D QE + + YL GL+ L E RVMP V A L S + + + V + LA + TEDF ++ Y+++ +D ++ D + L ED RK LRPLLDVI
Sbjct: 35 GDYPVLSTEWKEMAHNMKRFGEISEMERQLPKHE---------NATLWECEELALRYILEDGKLNLCLRLLVEYKDYEHGISQRELD-----PDTKALVSQFERGLGVMLKNAWLHVEALQTTDLPLLLEYIAGVLTFCEEEPVFVEKK----DLVDSQETIVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLTSHIQRHWKLFSDVDVLVACEVLALICDTEDFQSHAQSYVASAQVVRD-LRIIQEDILDSLVEDLDVRKKLRPLLDVI 288
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Match: A0A8K1CIH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIH2_PYTOL) HSP 1 Score: 193 bits (491), Expect = 3.070e-53 Identity = 109/279 (39.07%), Postives = 164/279 (58.78%), Query Frame = 1
Query: 7 FPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGEELALRYVLEDGKLNMCLRNLVDLREFHRN--RRGKVDLVDERPSTQANLDAFERGIGTVLRNAWTHIEALQTTDIPLLVEYVTGVIREAAEHPERIERMRRRGDLWDRQEVVCLSYLRGLVSCLSEYDEGRVMPHVRSAGTTAWLGSMLHANHEHLGMDTATVGAQALAFVFATEDFATYRNEYISNCDKDT-FASLRADFVAGLCEDQQERKTLRPLLDVISYCQRTHS 834
+P+LSD+W MA +GRI ++++ E +L + A + TLWE EE+ALRY+LEDGKLN+CLRNLV+ ++ + RG V + ST L+ FE+G+G L+NAW H EA+QTTD+PLL++Y+ V+ E+P + + + + QEV + +L G+ L DE R+MP V+ + L + L N L M + G + LA + +TEDF T+ + YI + ++ SL+ DF+ + ED RK LRPLLDVI QR+ +
Sbjct: 39 YPVLSDDWIQMAEQIGRIGEITEMERQLPK---------AKDATLWECEEVALRYLLEDGKLNLCLRNLVEFNDYFKRLVERGPV-----KDSTMELLEKFEKGMGLTLKNAWLHAEAVQTTDLPLLIQYIHDVLNYCLEYPTYLSNKK----MDNCQEVTVIYFLLGISKQLESMDESRIMPLVQEKRIFSLLAAHLSVNMNRLRMADISAGVETLALLSSTEDFQTHSDLYIDALETESALRSLKDDFLDAVTEDIDVRKRLRPLLDVIRKLQRSRN 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13375.2396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13375.2396.1 >prot_H-elongata_contig13375.2396.1 ID=prot_H-elongata_contig13375.2396.1|Name=mRNA_H-elongata_contig13375.2396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp GTFPLLSDEWCNMARTLGRIADVSDAEAKLARESHGREQKVANNKTLWEGback to top mRNA from alignment at H-elongata_contig13375:4363..7738- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13375.2396.1 ID=mRNA_H-elongata_contig13375.2396.1|Name=mRNA_H-elongata_contig13375.2396.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3376bp|location=Sequence derived from alignment at H-elongata_contig13375:4363..7738- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13375:4363..7738- >mRNA_H-elongata_contig13375.2396.1 ID=mRNA_H-elongata_contig13375.2396.1|Name=mRNA_H-elongata_contig13375.2396.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1686bp|location=Sequence derived from alignment at H-elongata_contig13375:4363..7738- (Himanthalia elongata Himel1 dioecious)back to top |