mRNA_H-elongata_contig129734.2169.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 325 bits (833), Expect = 4.530e-110 Identity = 163/224 (72.77%), Postives = 183/224 (81.70%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+L+SEQLESVTAEVF ELGNMDQTP+QHEMPVET+LEK AKDARI+ G GKEKERFTLCLAV D KVPLR IF GTP PP++PGKGK TQPRK SIA E+ P NR+K G+P GMSFGVQE SWCD REC LWI SW LRPNN S++ QRP ILVLDDFKCH+D+ FIA+L+++ NT I I GGLTPLLQPLDRMLNK+MKRLL G YT Y
Sbjct: 31 ESPIKGEDLTSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATG-GKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 315 bits (807), Expect = 8.140e-104 Identity = 163/224 (72.77%), Postives = 177/224 (79.02%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+L+ EQL SV AEVF+ELGNMDQTP+QHEMPVETTLEK AKDARIS G GKEKERFTL LAVMADG KV RIIF GTPF PP GKGK T PRK S+A E+ P NR K HPA GMSFGVQE SW D REC WI SW+LRPNN SI+ QRP ILVLDDFKCH+DE +IA L++ NT I+I GGLTPLLQPLDRMLNKQMKRLL GKYT Y
Sbjct: 93 ESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTG-GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 315
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 315 bits (808), Expect = 2.470e-103 Identity = 163/224 (72.77%), Postives = 176/224 (78.57%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+L+SEQL SV AEVF+ELGNMDQTP+QHE+PVETTLEK AKDARIS G GKEKERFTL LAVMADG KV RIIF GTPF PP GKGK T PRK S+A E+ P NR K GHPA GMSFGVQE SW D REC WI SW+LRPNN SI+ QRP ILVLDDFKCH+DE FIA L++ NT I I G LTPLLQPLDRMLNKQMKRLL KYT Y
Sbjct: 93 ESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTG-GKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAY 315
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 310 bits (795), Expect = 8.680e-102 Identity = 160/224 (71.43%), Postives = 175/224 (78.12%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+L+SEQL SV AEVF++LGNMDQTP+QHEMPVETTLEK AKDAR+S G G+EKERFTL LAV ADG KV LRIIF GTPF PP GKGK T PRK S+A E+ P NR K GHPA GMSFGVQE SW D REC W SW+LRPNN SI+ QRP ILVLDDFKCH+DE FIA L++ NT I I GGLTPLLQPLDRMLNKQ KRLL KYT Y
Sbjct: 27 ESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTG-GEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAY 249
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 314 bits (805), Expect = 2.180e-100 Identity = 160/224 (71.43%), Postives = 174/224 (77.68%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+L+SEQL SV AEVF+E+GNMDQ P+QHEMPVETTL+K AKDARIS G G EKERFTL LAV ADG KV RIIF GTPF PP GKGK T+PRK +A E+ P NR K GHPA GMSFGVQE SW D REC WI SW+LRPNN SI+ QRP ILVLDDFKCH DE FIA L++ NT I I GGLTPLLQPLDRMLNKQMKRLL GKYT Y
Sbjct: 287 ESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 510
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 308 bits (789), Expect = 3.600e-99 Identity = 162/249 (65.06%), Postives = 180/249 (72.29%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVG-------------------------KEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+LSS QLE VT E+F++LGNMDQTP+Q+EMPVETTLEK AKDARI+ G G KEKERFTLCLAV ADG+KVPLRIIF GTPF PP PGKGK TQPRK SIA EV P NR+K G P GMSFGVQE SWCD RE LWI SW+LRPNN S++ QR ILVLDDFKCH+D+ FIA L++ NT I I GGLTPLLQPLDRMLNKQMKRLL G YT +
Sbjct: 180 ESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 428
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 320 bits (819), Expect = 9.890e-99 Identity = 163/224 (72.77%), Postives = 177/224 (79.02%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+LSS QLE VT E+F+ELGNMDQTP+QHEMPVETTLE AKDARI+ G GKEKERFTLCLAV ADG KVPLRIIF GTPF PP PGKGK TQPRK SIA EV P NR+K G P GMSFGVQE SWCD REC LWI SW+LRPNN SI+ QR ILVLDDFKCH+D+ FIA L++ NT I I GGL PL QPLDRMLNKQMKRLL G YT +
Sbjct: 247 ESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATG-GKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAH 469
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 298 bits (763), Expect = 7.780e-95 Identity = 160/232 (68.97%), Postives = 171/232 (73.71%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRL--------RPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+L+SEQ SV AEVF+ELGNMDQTP+QHEMPVETTLE KDARIS G GKEKERFTL LAVMADG V IIF GTPF PP GKGK T PRK S+A EV P NR K GHPA GMSFGVQE SW +EC WI SW+L RPNN SI+ QRP ILVLDDFKCH+DE FIA L + NT I I GGLTPLLQPLDRMLNKQMKRLL GKYT Y
Sbjct: 247 ESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTG-GKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 477
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 307 bits (786), Expect = 3.620e-94 Identity = 156/219 (71.23%), Postives = 177/219 (80.82%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWG 657
E P+ G++L+ QLESV A+VF+ELGNMDQTP+Q EMPVETTLEKR KDARIS G GKEK+RFT CLAVMADG KVP RIIF G PF PP+ G+ K TQ RKG IAAEV NRTKFG+P GM F VQE SWCDARECTLW+ SWR RPN+ S+I QR SILVLDDF+CHR E+F+ DLR+R NT+ ILI GGLTPLLQPLDRMLNK+MKRL+ G
Sbjct: 162 ESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTG-GKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 290 bits (743), Expect = 3.390e-92 Identity = 153/224 (68.30%), Postives = 168/224 (75.00%), Query Frame = 1
Query: 1 ELPVNGEELSSEQLESVTAEVFQELGNMDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVPLRIIFNGTPFNPPNKPGKGKITQPRKGSIAAEVAPGNRTKFGHPAVGMSFGVQENSWCDARECTLWI*ASWRLRPNNRSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSAILILGGLTPLLQPLDRMLNKQMKRLLWGKYTTY 672
E P+ GE+LSS QLE VT E+F+ELGNMDQTP+QHE PVE L KR + S +ERFTLCLAV ADG KVPLRIIF GTPF PP PGKGK TQPRK SIA EV P NR+K G P GMSFGVQE SWCD REC LWI SW+LRPNN SI+ QR ILVLDDFKCH+D+ FIA L++ NT I I GGLTPLLQPLDRMLNKQMKRLL G YT +
Sbjct: 217 ENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKRPVRRMPAS----PPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 435 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129734.2169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig129734.2169.1 >prot_H-elongata_contig129734.2169.1 ID=prot_H-elongata_contig129734.2169.1|Name=mRNA_H-elongata_contig129734.2169.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp MDQTPIQHEMPVETTLEKRRAKDARISIGVGKEKERFTLCLAVMADGSKVback to top mRNA from alignment at H-elongata_contig129734:947..1854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig129734.2169.1 ID=mRNA_H-elongata_contig129734.2169.1|Name=mRNA_H-elongata_contig129734.2169.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=908bp|location=Sequence derived from alignment at H-elongata_contig129734:947..1854- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig129734:947..1854- >mRNA_H-elongata_contig129734.2169.1 ID=mRNA_H-elongata_contig129734.2169.1|Name=mRNA_H-elongata_contig129734.2169.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at H-elongata_contig129734:947..1854- (Himanthalia elongata Himel1 dioecious)back to top |