mRNA_H-elongata_contig1291.2137.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A6H5JCB9_9PHAE (ENTH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCB9_9PHAE) HSP 1 Score: 129 bits (325), Expect = 4.400e-33 Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 PDVAGRQKRAAGLVATTVRDRLNSARQRASRAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
P A + RA + +++RDRLN ARQRAS AYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPT EMPKEFNVYLPVVR
Sbjct: 222 PPKASKMGRAKAMSMSSMRDRLNRARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVR 307
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A7S3XNF0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNF0_HETAK) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-11 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 61 RLNSARQRASRAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
RL + +A A RE K L+SSE+E V+LKATRP DLPVK KHL+AL+ + P+EF+VY PV++
Sbjct: 2 RLRALADQARAAARELKGLVSSELEAVLLKATRPTDLPVKDKHLDALLFCCSSTPQEFDVYTPVLK 67
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A7S2LGQ7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGQ7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.060e-9 Identity = 30/74 (40.54%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 37 LVATTVRDRLNSARQRASRAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
+V + + +A++R + RE K ++SSE+E V+LK+TRPDD PVK KH+E L+ T ++P ++Y P++R
Sbjct: 221 VVRDSTASAMAAAKERTGKYVREVKGMLSSELEQVLLKSTRPDDTPVKAKHMERLIGITYQLPGHLDLYDPILR 294
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A7S1UKU7_9STRA (Hypothetical protein n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKU7_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.550e-8 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 46 TTVRD----RLNSARQRASRA----YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
+TVRD L +AR+ +S+ YRE K L SSE+E V+LKATRPDD PVK KH+E L+ T ++ +++Y V+R
Sbjct: 195 STVRDVAVGSLKAARETSSKLTHNIYREVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQVSARYDLYTGVLR 273
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A7S4S5P7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S5P7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.000e-8 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 1 PDVAGRQKRAAGLVATTVRDRLNSARQRASRAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
PDVA + A + T V+D+ +S YRE K L SSE+E V+LKATRPDD PVK KH+E L+ T ++ +++Y V+R
Sbjct: 250 PDVATVRDAATSSI-TAVKDKSTKI---SSGIYREIKGLTSSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDAVLR 331
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A7S4VB79_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.250e-8 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 1 PDVAGRQKRAAGLVATTVRDRLNSARQRASRAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
PDVA + A + T V+D+ +S YRE K L SSE+E V+LKATRPDD PVK KH+E L+ T ++ +++Y V+R
Sbjct: 250 PDVATVRDAATSSI-TAVKDKSTKI---SSGIYREIKGLTSSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDAVLR 331
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A1Z5K193_FISSO (ENTH domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K193_FISSO) HSP 1 Score: 57.8 bits (138), Expect = 8.480e-8 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 97 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
YRE K L SSE+E V+LKAT+PDD PVK KH+E L+ T ++ +F++Y V+R
Sbjct: 218 YREVKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDIYDAVLR 271
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: B7G2T5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T5_PHATC) HSP 1 Score: 57.8 bits (138), Expect = 8.500e-8 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 97 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
YRE K L SSE+E V+LKATRPDD PVK KH+E L+ T ++ +++Y V+R
Sbjct: 246 YREVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQISPRYDIYDAVLR 299
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: B8BYK3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYK3_THAPS) HSP 1 Score: 57.0 bits (136), Expect = 1.580e-7 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 88 SRAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
S YRE K L SSE+E V+LKATRPD+ PVK KH+E L+ T ++ ++++Y V+R
Sbjct: 241 SNIYREVKGLTSSELEQVMLKATRPDETPVKTKHVERLVGVTYQISGKYDIYDAVLR 297
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Match: A0A448ZTH1_9STRA (ENTH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH1_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.580e-7 Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 97 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTAEMPKEFNVYLPVVR 258
YRE K L SSE+E V+LKATRPDD PVK KH E L+ T ++ +++Y V+R
Sbjct: 220 YREVKGLTSSELEQVMLKATRPDDTPVKGKHAERLVGVTYQISARYDIYDAVLR 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1291.2137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1291.2137.1 >prot_H-elongata_contig1291.2137.1 ID=prot_H-elongata_contig1291.2137.1|Name=mRNA_H-elongata_contig1291.2137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp PDVAGRQKRAAGLVATTVRDRLNSARQRASRAYREAKSLMSSEMEGVVLKback to top mRNA from alignment at H-elongata_contig1291:195..452- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1291.2137.1 ID=mRNA_H-elongata_contig1291.2137.1|Name=mRNA_H-elongata_contig1291.2137.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=258bp|location=Sequence derived from alignment at H-elongata_contig1291:195..452- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1291:195..452- >mRNA_H-elongata_contig1291.2137.1 ID=mRNA_H-elongata_contig1291.2137.1|Name=mRNA_H-elongata_contig1291.2137.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at H-elongata_contig1291:195..452- (Himanthalia elongata Himel1 dioecious)back to top |