mRNA_H-elongata_contig127942.2060.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 268 bits (686), Expect = 2.620e-87 Identity = 135/213 (63.38%), Postives = 158/213 (74.18%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVELLEYDSDLEFLGVSRGGEKEGE 762
ILVLDDFKCH+ E FIA L + NT VI +PGG TPLLQPLDRMLNKQMKRLLRGKYTAY+A+AVAD +GKLK P RG+ S WCK+AW +ITP+ VKTCFKICGLTLALD SEDHAWC HNF E YR+LL++Q W HP V+L PL+LP+VP G +N ITAA KEV+G+LLP ESD++VE+ E GG+ EGE
Sbjct: 40 ILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVSEXXXXXXXXXXQGGGDAEGE 249
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 269 bits (687), Expect = 1.040e-82 Identity = 136/213 (63.85%), Postives = 158/213 (74.18%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVELLEYDSDLEFLGVSRGGEKEGE 762
ILVLDDF+CH+DE FIA L + NT VI +PGGLTPL PLDRMLNKQMKRLLRGKYTAY+A+AVAD +GKLK P RG+ S WCKEAW +ITP+ VKTCFKICGLTLALD SEDHAWC HNF E YR+LL++Q W HP V+L PL+LP+VP G +N ITAA KEV+G+LLP ESD++VE+LE GG EGE
Sbjct: 430 ILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 639
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 257 bits (656), Expect = 2.460e-82 Identity = 131/213 (61.50%), Postives = 155/213 (72.77%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVELLEYDSDLEFLGVSRGGEKEGE 762
ILVLDDFKC +DE FIA L + NT I +PGGLTPLLQPLDR+LNKQMKR+LRGKYTAY+A+AVAD +GKLK P RG+ S WC EAW +I P+ VKTCFKICGLTLALD EDHAW HNF E YR+LL++Q W HP +L PL+LPEVP G N IT A KEV+ +L+P ES ++VE+LE DSD+E + GG EGE
Sbjct: 40 ILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGFDF--NPITGAQKEVEEKLMPYVAD-ESASEVEVLEGDSDVEVVEGQGGGGAEGE 249
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 263 bits (671), Expect = 3.420e-82 Identity = 135/213 (63.38%), Postives = 156/213 (73.24%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVELLEYDSDLEFLGVSRGGEKEGE 762
ILVLDDFKCH+DE FIA L + NT VI +PG LTPLLQPLDRMLNKQMKRLLR KYTAY+A+AVAD +GKLK P RG+ S WCKEAW + TP+ VKTCF ICGLTLALD SEDHAWC HNF E YR+LL++QR W H V+L PL+LP+VP G +N ITAA KEV+G+LLP ESD++VE+LE GG EGE
Sbjct: 256 ILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 256 bits (655), Expect = 2.830e-81 Identity = 131/212 (61.79%), Postives = 154/212 (72.64%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVELLEYDSDLEFLGVSRGGEKEG 759
ILVLDD KCH+ E FIA L + NT VI +PGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+ +AVAD +GKLK P RG+ S WCKEAW +ITP+ VK+CFKICGLTLALD SEDHAWC H+F E +LL++Q W HP V+L PL+LP+VP G +N ITAA KEV+G+LLP ESD++VE+LE GG EG
Sbjct: 137 ILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEG 345
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 260 bits (665), Expect = 4.040e-80 Identity = 129/192 (67.19%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVEL 699
ILVLDDFKCH+D+ FIA L + NT VI +PGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A DP TGKL PGRG + WCK AWA+ITP+ VKTCFKICGLTLALD SEDHAWC+HNF +GYRELL++QRV W HP V+L PLQLP+VP ES N I AA KE++ LLP + D+D+E+
Sbjct: 369 ILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAGLLP----RGDDSDIEI 554
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5JJG0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG0_9PHAE) HSP 1 Score: 248 bits (634), Expect = 5.190e-80 Identity = 129/210 (61.43%), Postives = 154/210 (73.33%), Query Frame = 1
Query: 148 CHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHA-----WCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVELLEYDSDLEFLGVSRGGEKEGE 762
CH+DE +IA L + NT VI +PGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+A+AVAD +GKLK P G+ S WC EAW ITP+ VKTCFKICGLTLALD SEDHA WC H+F E YR+LL++Q W HP V+L PL+LP+VP G ++ ITAA KEV+G+LLP ESD++VE+LE DSD+ + GG EGE
Sbjct: 2 CHKDEGYIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPECGVVSTWCTEAWEFITPETVKTCFKICGLTLALDGSEDHACEDHAWCEHHFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSSPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGDSDVGVVKGQGGGGAEGE 208
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 259 bits (661), Expect = 1.870e-79 Identity = 128/192 (66.67%), Postives = 148/192 (77.08%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVEL 699
ILVLDDFKCH+D+ FIA L + NT VI +PGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A DP TGKL PGRG + WCK AWA+ITP+ KTCFKICGLTLALD SEDHAWC+HNF +GYRELL++QRV W HP V+L PLQLP+VP ES N I AA KE++ LLP + D+D+E+
Sbjct: 376 ILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAGLLP----RGDDSDIEI 561
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 250 bits (639), Expect = 5.440e-79 Identity = 122/179 (68.16%), Postives = 142/179 (79.33%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLP 660
ILVLDDFKCH+DE FIA L + NT VI +PGGLTPLLQPLD LNKQMKRLLRGK+TAY+++AVAD +GKLK P RG+ S WCKE W +ITP+ VKTCFKICGLTLALD SEDHAWC HNF E YR+LL++Q W HP V+L PL+LP+VP G +N ITAA KEV+G+LLP
Sbjct: 101 ILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLP 275
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 254 bits (649), Expect = 2.240e-77 Identity = 129/191 (67.54%), Postives = 146/191 (76.44%), Query Frame = 1
Query: 124 ILVLDDFKCHRDEAFIADLWKRFNTSVILVPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKLPGRGMESMWCKEAWAAITPDLVKTCFKICGLTLALDDSEDHAWCMHNFAEGYRELLQKQRVAWEEAHPGVSLSPLQLPEVPDGESIGTNLITAADKEVQGRLLPPTGGKESDNDVE 696
ILVLDDFKCH+D+ FIA L K NT VI +PGGLTPLLQPLDRMLNKQMKRLLRG YTA TA A DP TG L PGRG + WCK AWA+ITP+ VKTCFKICGLTLALD SEDHAWC+HNF +GYRELL++QRV W HP V+L LQLP+VP ES N I AA KE++ LLP G +SD ++E
Sbjct: 406 ILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVP-AESTA-NHIEAAAKELEAGLLPC--GDDSDIEIE 592 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127942.2060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig127942.2060.1 >prot_H-elongata_contig127942.2060.1 ID=prot_H-elongata_contig127942.2060.1|Name=mRNA_H-elongata_contig127942.2060.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=255bp YRLVCRRIAGVTRGSAPLGSRRAGGFAPTTEASSRRARASWILVLDDFKCback to top mRNA from alignment at H-elongata_contig127942:210..974+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig127942.2060.1 ID=mRNA_H-elongata_contig127942.2060.1|Name=mRNA_H-elongata_contig127942.2060.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=765bp|location=Sequence derived from alignment at H-elongata_contig127942:210..974+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig127942:210..974+ >mRNA_H-elongata_contig127942.2060.1 ID=mRNA_H-elongata_contig127942.2060.1|Name=mRNA_H-elongata_contig127942.2060.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1530bp|location=Sequence derived from alignment at H-elongata_contig127942:210..974+ (Himanthalia elongata Himel1 dioecious)back to top |