mRNA_H-elongata_contig12791.2058.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: D8LKI7_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI7_ECTSI) HSP 1 Score: 390 bits (1003), Expect = 4.370e-127 Identity = 226/418 (54.07%), Postives = 275/418 (65.79%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSG--RPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
KVA TIVG KT ISGGEKKRLS+ CQLFGTPSLIFCDEPTTGLD+FQAERVM+TLRQLA++GHTVICSIHQPRSSIF MFDD+++LSEGRV++ GPA I + RSKGY +PS+TNP +FA+D+VS+DYTSK++ +R+ + EH S + +S + + E E A+V GGA+ +K+ +R RG AG +EQFRLLL+RSWRQVNRAKFAN TRV+ANLGSAV+FGSIFWKLGMGQ+HINDRIGLLQT+VIQ AMSTVAKTLVTFP E+T+VKAERSL MYS+LPYFL+KMIA+LP++ALFP + G ++Y+MTGLH KR+R
Sbjct: 156 KVASTIVGDEKTRGISGGEKKRLSMGCQLFGTPSLIFCDEPTTGLDAFQAERVMATLRQLAQDGHTVICSIHQPRSSIFGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDYTSKKTERRTKERIARFDAEHRASAPTXXXXXXXXXXXXLLS---YFVSHWEKTGGEATEDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVVKGGATS-SKAAAQR-RGXXXXXXXXXXAKXGSKXXXXXXXXXXXXXXXXXXXXAGAMEQFRLLLARSWRQVNRAKFANATRVVANLGSAVVFGSIFWKLGMGQSHINDRIGLLQTSVIQTAMSTVAKTLVTFPKEATIVKAERSLNMYSVLPYFLAKMIADLPLTALFPTVSGAVMYKMTGLHPKRDR 568
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A8J4B572_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B572_9CHLO) HSP 1 Score: 286 bits (732), Expect = 5.190e-86 Identity = 183/416 (43.99%), Postives = 230/416 (55.29%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
KVADT VG KT +SGGEKKRLSI C+L G+PSLIFCDEPTTGLDSFQAE+VM+TL LA+ GHTV+ S+HQPRSSIF MFDDL++LSEG+ VY GPA H +V P NPAEF D++SIDYT+K E E ESR R+ RL + SGSS + S GG + GT DS+ ++ A + +AL PRS G V Q RLLL+RSWRQV R K N+ R M+NL SA++FG+I++++ GQ+ I DR+GLLQ A I AMS++ KTL FP E T+V ER+ + Y IL Y +K+ AELP+ ALFP +FG ++Y GLH R
Sbjct: 203 KVADTRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMATLSSLARSGHTVVASVHQPRSSIFAMFDDLVLLSEGQPVYSGPAPEALDHFARLSHVCPEHFNPAEFLADLISIDYTNK-------------------------------------------------------EVEAESRARLERLV-----AAWRKVESGSSTGNNDRQPS-GGLTVGTN------------DSEGVE--------AAVVMRRVALMPRS-----GPVRQLRLLLTRSWRQVVRDKATNMARAMSNLSSALVFGAIYFRMKRGQSSIRDRMGLLQVAAINTAMSSLVKTLNIFPRERTIVARERARQSYDILSYLSAKLAAELPVGALFPVLFGTLVYPTCGLHPSLAR 532
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A8J4C8S2_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8S2_9CHLO) HSP 1 Score: 278 bits (712), Expect = 2.620e-85 Identity = 174/416 (41.83%), Postives = 225/416 (54.09%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K A T VG KT +SGGEKKRLSI C+L G+PSLIFCDEPTTGLDSFQAE+VM+TL LA+ GHTV+ S+HQPRSSIF MFDDL++LSEG+ VY GPA H G+V P NPAEF D++SIDYT+K E E ESR R+ RL + + A +G + + GG + GT ++D A + AL PRS G + Q RLLL+RSWRQV R K N+ R +NL SA++FG+IF+++ Q+ + DR+GLLQ A I AMS++ KT+ FP E T+V ER+ + Y ILPY +K+ AELP+ A+FP +FG ++Y GLH R
Sbjct: 96 KAAATRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMATLSSLARSGHTVVASVHQPRSSIFVMFDDLVLLSEGQPVYSGPAREALDHFGRLGHVCPEHYNPAEFLADLISIDYTNK-------------------------------------------------------EVEAESRARLERLVAAWREVENGYAGNGGRQPS-------GGLTVGTN--------------------DSDGAEADVVMRRAALMPRS-----GPLRQLRLLLTRSWRQVVRDKATNMARATSNLFSALLFGAIFFRMKRSQSSVQDRMGLLQVAAINTAMSSLVKTITIFPKERTIVARERARQSYGILPYLSAKLAAELPVGAIFPVLFGALVYPTCGLHPSLAR 424
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: D8ULB6_VOLCA (ATP-binding cassette transporter n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8ULB6_VOLCA) HSP 1 Score: 280 bits (715), Expect = 6.240e-85 Identity = 177/422 (41.94%), Postives = 218/422 (51.66%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWR-----GKWFGDSDVLDRVNADDKSALE-MSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K DT VG K +SGGEKKRLSI C+L G+PSLIFCDEPTTGLDSFQAE+VM+TL LA+ GHTV+ S+HQPRSSIF MFDDL++LSEG+ VY GPA H S G+V P NPAEF D++SID+ +K +AE ESR R+ RL V WR G + G+ E + AL PR AG V Q LLLSRSWRQV R K NV R M+NL SA++FG+IF+++ GQ+ I DR+GLLQ A I AMS++ KTL FP E T+V ER+ + Y ILPY +K+ AELP+ ALFP +FG ++Y GLH R
Sbjct: 200 KAGDTRVGDEKNRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMATLSSLARSGHTVVASVHQPRSSIFAMFDDLVLLSEGQPVYSGPADKALDHFASLGHVCPEHYNPAEFLADLISIDFANK-------------------------------------------------------DAEAESRARLERL-------------------------------------VTAWRAIEQSGAYGGNXXXXXXXXXXXXXXXEGVMRRAALLPR-----AGPVRQLSLLLSRSWRQVTRDKATNVARAMSNLSSALVFGAIFFRMKRGQSSIQDRMGLLQVAAINTAMSSLVKTLNIFPRERTIVARERARQSYGILPYLSAKLAAELPVGALFPLLFGALVYPACGLHPSLPR 524
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A836CJY0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJY0_9STRA) HSP 1 Score: 281 bits (718), Expect = 7.070e-85 Identity = 182/419 (43.44%), Postives = 227/419 (54.18%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEG-HTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPS-DTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLK-MYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
KV DT VG +K +SGGEK+RL IAC+L G+PS++ DEPTTGLDSFQA +VM L LAK+G HTV+C IHQPR SI + DD+++LSEG+VVY GP + L S V PS +TNPAEFAID+VSIDY+SK EAE ESRER+ L S + A + A + K+ RW G V+ R + G++ QFRLLL RSWRQVNR KFAN TR M +GSA+IFG+IFWKL Q+ INDR+GLLQ A I AMS V L F TE +V+ ERS Y ILPYFL+K++AELP+S + P+IFGV++Y+M GL+ K ER
Sbjct: 136 KVRDTYVGDSKMRGVSGGEKRRLGIACELLGSPSVVLADEPTTGLDSFQASQVMLALSDLAKKGGHTVVCVIHQPRGSIVDLLDDMLVLSEGKVVYSGPTDKVVSKLSSALGVHPSKNTNPAEFAIDLVSIDYSSK-------------------------------------------------------EAEAESRERLQVLR---------------SVHVEA----HNAALDAVKALDHRWSGNG---KPVVRRTG----------------------QLGVIGQFRLLLQRSWRQVNRCKFANFTRAMTQVGSALIFGAIFWKLDFSQSRINDRLGLLQVASINTAMSVVVGALRVFLTERGIVERERSRAGSYGILPYFLAKLVAELPMSGILPSIFGVLVYKMGGLNTKPER 455
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A2K3D6G1_CHLRE (ABC transporter domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D6G1_CHLRE) HSP 1 Score: 280 bits (717), Expect = 6.410e-84 Identity = 180/416 (43.27%), Postives = 222/416 (53.37%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K DT VG KT +SGGEKKRLSI C+L G+PSLIFCDEPTTGLDSFQAE+VMSTL+ LA GHTV+ SIHQPRSSIF MFDDL++LSEG+ VY GPA H + G+V P NPAEF D++S+D+ S EAE +SR R+ +L VS A E D++ R + D L M A L PR AG + Q RLLL RSWRQV R K NV R M+NL SAV+FG+IF+++ GQ++I DR+GLLQ A I AM+++ KTL FP E T+V ER+ YSIL Y +K+ AELP+ ALFP +FG I+Y + GLH R
Sbjct: 201 KAIDTCVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMSTLKGLAASGHTVVASIHQPRSSIFAMFDDLVLLSEGQPVYSGPADQALAHFEALGHVCPEHFNPAEFLADLISLDFASP-------------------------------------------------------EAEADSRARLDKL------------------------VSAWRAKEAAXXXXXXXXXXXXXXXDMMRRTASTD---LVMRRAAEL-PR-----AGPLRQLRLLLVRSWRQVVRDKATNVARAMSNLSSAVVFGAIFFRMRRGQSNIQDRMGLLQVASINTAMASLVKTLNIFPRERTIVARERARGSYSILSYLSAKLAAELPVGALFPLLFGAIVYPVCGLHPSLPR 528
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A8J4C3V9_9CHLO (ABC transporter domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C3V9_9CHLO) HSP 1 Score: 278 bits (712), Expect = 2.650e-83 Identity = 174/416 (41.83%), Postives = 225/416 (54.09%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K A T VG KT +SGGEKKRLSI C+L G+PSLIFCDEPTTGLDSFQAE+VM+TL LA+ GHTV+ S+HQPRSSIF MFDDL++LSEG+ VY GPA H G+V P NPAEF D++SIDYT+K E E ESR R+ RL + + A +G + + GG + GT ++D A + AL PRS G + Q RLLL+RSWRQV R K N+ R +NL SA++FG+IF+++ Q+ + DR+GLLQ A I AMS++ KT+ FP E T+V ER+ + Y ILPY +K+ AELP+ A+FP +FG ++Y GLH R
Sbjct: 203 KAAATRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMATLSSLARSGHTVVASVHQPRSSIFVMFDDLVLLSEGQPVYSGPAREALDHFGRLGHVCPEHYNPAEFLADLISIDYTNK-------------------------------------------------------EVEAESRARLERLVAAWREVENGYAGNGGRQPS-------GGLTVGTN--------------------DSDGAEADVVMRRAALMPRS-----GPLRQLRLLLTRSWRQVVRDKATNMARATSNLFSALLFGAIFFRMKRSQSSVQDRMGLLQVAAINTAMSSLVKTITIFPKERTIVARERARQSYGILPYLSAKLAAELPVGAIFPVLFGALVYPTCGLHPSLAR 531
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A383W642_TETOB (ABC transporter domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W642_TETOB) HSP 1 Score: 276 bits (705), Expect = 5.260e-82 Identity = 170/416 (40.87%), Postives = 221/416 (53.12%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K DT VG K +SGGEKKRL+I C+L +PSL+F DEPTTGLDSFQAE+V++TL+QLA GHTV+CSIHQPRSSIF +FDDL++LSEGR VY GPA + G+ P+ NPAEF D++SIDY+S E EEES+ R+ L D A AS G K+ + A + S LAL + AG QFRLLL RSWRQ+ R K A + R+ +N+ SAVIFG+IFW++ Q++I DR+GLLQ A I AMS + KT+ FP E +V ER+ K Y++LPY +K++AELP+S +FP +FGV++Y TGL+ K R
Sbjct: 220 KSRDTRVGDEKIRGLSGGEKKRLAIGCELISSPSLLFLDEPTTGLDSFQAEKVVATLKQLASAGHTVVCSIHQPRSSIFGLFDDLLLLSEGRCVYSGPAEEALPYFEQLGHSCPAHYNPAEFVADLISIDYSSP-------------------------------------------------------EVEEESKARVQGLVDAWA------------------------ASAGGKA--------------AAEAAAAHKHMSRTPSGELALGSVNSGPVAGWARQFRLLLRRSWRQITRDKAAAMARLSSNVSSAVIFGAIFWRMQKKQSNIQDRMGLLQVAAINTAMSALVKTITVFPKERAIVNRERTRKAYNVLPYLSAKLLAELPVSCVFPLVFGVVVYPFTGLNPKPVR 542
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A150GTS9_GONPE (ABC transporter domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GTS9_GONPE) HSP 1 Score: 273 bits (697), Expect = 2.820e-81 Identity = 170/416 (40.87%), Postives = 217/416 (52.16%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K T+VG KT +SGGEKKRLSI C+L G+PSL+F DEPTTGLDSFQAE+VM+TL LA+ GHTV+ SIHQPRSSIF MFDDL++LSEG+ VY GPA H S G+ P NPAEF D++SID+ S EAE +SR R+A+L V WR + + N S +S + L +AG + Q RLLL RSWRQV R + NV+R M+NL SA++FG+IF+++ Q++I DR+GLLQ A I AM+++ KTL FP E T+V ER+ + Y ILPY +K+ AELPI ALFP +FG I+Y GLH R
Sbjct: 203 KAMGTLVGDEKTRGLSGGEKKRLSIGCELVGSPSLVFADEPTTGLDSFQAEKVMATLASLARSGHTVVASIHQPRSSIFAMFDDLVLLSEGQPVYSGPADKALEHFASLGHHCPEHFNPAEFLADLISIDFASP-------------------------------------------------------EAEADSRARLAKL-------------------------------------VAAWRDVEQRQAGAIGNGNGLPSS---VSGEVVLRRSEALPRAGPLRQLRLLLVRSWRQVLRDRATNVSRAMSNLSSAIVFGAIFFRMRYKQSNIQDRMGLLQVAAINTAMASLVKTLNIFPRERTIVARERARQSYGILPYLTAKLAAELPIGALFPLLFGAIVYPTCGLHPSATR 523
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Match: A0A7J7Q7J4_9CHLO (ABC-2 type transporter-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q7J4_9CHLO) HSP 1 Score: 271 bits (693), Expect = 1.230e-80 Identity = 168/416 (40.38%), Postives = 213/416 (51.20%), Query Frame = 1
Query: 1 KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLRQLAKEGHTVICSIHQPRSSIFRMFDDLMMLSEGRVVYHGPAASIAGHLRSKGYVVPSDTNPAEFAIDIVSIDYTSKQSMQRSSGVYTQLLVEHGVRVSEIVFASRGMSRSASSSSPSFLLSGRPRALSVEQEAEEESRERIARLADDQASLVSAQASSGSSEYTHAASVSYGGASEGTKSFVRRWRGKWFGDSDVLDRVNADDKSALEMSEALALEPRSCRQKAGIVEQFRLLLSRSWRQVNRAKFANVTRVMANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHRKRER 1248
K DT VG K +SGGEKKRL+I C+L +PSL+F DEPTTGLDSFQAE+V++TL++LA GHTV+CSIHQPRSSIF MFDDL++LSEGR VY GPA + G+ P + NPAEF D++SIDY+S E E ES+ R+ L D W G G D A A S AL S AG QFRLLL RSWRQ+ R K A + R+ +NL SA IFG+IFW++ Q+ I DR+GLLQ A I AMS + KT+ FP E +V ER+ K Y++LPY +K++AELP+S +FP +FG ++Y TGL+ K R
Sbjct: 222 KSRDTRVGDEKVRGLSGGEKKRLAIGCELISSPSLLFLDEPTTGLDSFQAEKVVATLKELASAGHTVVCSIHQPRSSIFGMFDDLLLLSEGRCVYSGPADEALPYFEQLGHACPRNYNPAEFVADLISIDYSSP-------------------------------------------------------EVEGESKARVQALVD-------------------------------------AWAGS-AGGKAAADAAAAHTHLARSRSGVPALGAVSTGPVAGWRRQFRLLLRRSWRQITRDKAAAMARLSSNLSSAAIFGAIFWRMQKKQSSIQDRMGLLQVAAINTAMSALVKTITVFPKERAIVNRERTRKAYNVLPYLSAKLLAELPVSCVFPLVFGGVVYPFTGLNPKPIR 544 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12791.2058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12791.2058.1 >prot_H-elongata_contig12791.2058.1 ID=prot_H-elongata_contig12791.2058.1|Name=mRNA_H-elongata_contig12791.2058.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=417bp KVADTIVGYAKTLCISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDSFQAback to top mRNA from alignment at H-elongata_contig12791:5252..8464- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12791.2058.1 ID=mRNA_H-elongata_contig12791.2058.1|Name=mRNA_H-elongata_contig12791.2058.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3213bp|location=Sequence derived from alignment at H-elongata_contig12791:5252..8464- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12791:5252..8464- >mRNA_H-elongata_contig12791.2058.1 ID=mRNA_H-elongata_contig12791.2058.1|Name=mRNA_H-elongata_contig12791.2058.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2502bp|location=Sequence derived from alignment at H-elongata_contig12791:5252..8464- (Himanthalia elongata Himel1 dioecious)back to top |