mRNA_H-elongata_contig12588.1927.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12588.1927.1
Unique NamemRNA_H-elongata_contig12588.1927.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: D8LL05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL05_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.850e-75
Identity = 124/160 (77.50%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:   13 GQLQQQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAEFRGNEDGSA 492
            G  QQQSIDLSVLSLEQLNQ+KT+HEEEV+ LS NF+KLRDAQARFSESISAVE L    E+KEILVPLTQSLYVPGRIVE DKM+VDVGTGYYV+KD+QKT EFL RKKD+VTTNLESLRN  D+KRKNLE IV VMRRKI +I+TK+AEF+ +E+  A
Sbjct:    3 GGQQQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARFSESISAVEALGSKTEDKEILVPLTQSLYVPGRIVEADKMMVDVGTGYYVQKDQQKTAEFLGRKKDMVTTNLESLRNAIDVKRKNLEAIVMVMRRKIGDIETKRAEFKSSEEAKA 162
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A835ZFR4_9STRA (Prefoldin subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR4_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.920e-46
Identity = 79/152 (51.97%), Postives = 115/152 (75.66%), Query Frame = 1 
Query:   25 QQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAEFRGNE 480
            Q+ +DLS LSLEQLNQ+KT+H+EEV+ L++N+  LRD  AR+ E+ SAVE +    E +EILVPLTQSLYVPG+++E DK LVD+GTGYY EK +++T EFL+RK  +V  NL SLR   ++KRK  ET+  VMR+++++I+  ++++   +
Sbjct:    7 QREVDLSSLSLEQLNQLKTQHQEEVQTLTANYAALRDGLARYQEAKSAVEAMGRKAEGREILVPLTQSLYVPGKVIEGDKFLVDIGTGYYAEKSQRETEEFLTRKAGMVEANLASLREVIEMKRKAFETLTMVMRQRLSQIEENRSKYMAQQ 158
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A7S2C3Z7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3Z7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.330e-34
Identity = 70/157 (44.59%), Postives = 107/157 (68.15%), Query Frame = 1 
Query:    1 MAEEGQLQQQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAEFR 471
            MA EG    + IDLS + + QLN +KT HE+E+  L+ N+  L+ AQ++ + ++  +  + G+ E +EILVPLT SLYVPG I + +K+L+DVGTGY+VEK   K  +F+ RK  +VT N + ++N T  K+KNLETIV +MR+++A +Q  Q + +
Sbjct:    1 MAAEGGGGGREIDLSQMDINQLNDLKTSHEQEIDQLTGNWRTLKHAQSKLNTAVVCLNEV-GSQEGREILVPLTPSLYVPGTICDTNKVLLDVGTGYFVEKSLAKAKDFVDRKNKMVTVNADQIQNVTQQKQKNLETIVMIMRQRMAMMQQAQEDAK 156
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A7S3NIR8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIR8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.230e-33
Identity = 68/149 (45.64%), Postives = 104/149 (69.80%), Query Frame = 1 
Query:   25 QQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLR--GAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAE 465
            QQ ID+S LSLEQLN +K +HEE V+ LSS    ++ A+ RF ES + ++ ++     E KE+LVPLTQSLYV G +++ D++LVD+GTGY+++K  Q   E + RK  +VT N++S+    + K++NL  IV+VM+ K+ +IQ ++AE
Sbjct:    5 QQQIDISKLSLEQLNSMKQEHEESVQELSSQLETMKLAEGRFRESRNTLDIIKLDDQAEGKEMLVPLTQSLYVSGNVLDADQVLVDIGTGYFLQKSVQGAQEMIDRKLKVVTQNMDSIHTVVNQKQENLNAIVTVMQYKMQQIQKQKAE 153
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A7S3ZUY5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUY5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.190e-31
Identity = 65/155 (41.94%), Postives = 100/155 (64.52%), Query Frame = 1 
Query:   25 QQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAEFRGNEDGS 489
            QQ +D+S +SLEQLN  K + E E+K L +    L+ A+ RF +S  A+  +    E + +LVPLTQSLYVPG + +PD++LV++GTGYY+EK +Q   E L RK   V+ N E +      K++N + IV +M+ K+A+IQ +++E +  +D S
Sbjct:    3 QQQVDISAMSLEQLNTYKGQFENEIKQLHARHSGLKQAEGRFRQSKDALAAISKDDEGRRMLVPLTQSLYVPGELGDPDQLLVELGTGYYIEKTQQGATELLDRKIGTVSKNAEDINTVVASKQQNYDAIVQMMQVKMAQIQERRSELQRQQDRS 157
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: F0YDJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ5_AURAN)

HSP 1 Score: 120 bits (300), Expect = 1.460e-31
Identity = 65/153 (42.48%), Postives = 98/153 (64.05%), Query Frame = 1 
Query:   34 IDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAEFRGNEDGSA 492
            +D+S LSL+QLNQ+K++HE+E+  L      L+ A+ RF +S  A+  +    E K +LVPLTQSLYVPG++ + D +LV++GTGYY+EK +      + RK  +V  N E++      K +N E IV +M+ K+A+IQ K+AEF   +D  A
Sbjct:    1 MDISTLSLDQLNQLKSQHEQELNQLRERHSSLKQAEGRFRQSKDALAAISKDDEGKSMLVPLTQSLYVPGKLCDVDSLLVELGTGYYLEKKKDDADAMIDRKIKLVADNAENITTVVAQKTRNHEAIVMMMQHKMAQIQEKKAEFDRQQDRGA 153
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A2P6NP58_9EUKA (Prefoldin subunit 5 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NP58_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 2.930e-31
Identity = 64/146 (43.84%), Postives = 102/146 (69.86%), Query Frame = 1 
Query:   13 GQLQQQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQ 450
             Q +QQ ID+S LSLEQLN  K + EEEV+VLS+++ +L+ A ARF++S  A+  ++   E K +LVPLT SL+VPG++   +++L+D+GTGYYV K  ++  +F  RK  ++  N + +     +KRKNLE+++ VM++KI ++Q
Sbjct:    2 AQPKQQGIDISQLSLEQLNTFKQQFEEEVQVLSNSWQQLKLASARFTDSKDALSAIKTENEGKAMLVPLTTSLFVPGQLTNTEQVLIDIGTGYYVTKPVKQASDFFDRKIKMINDNADQVAQAVSVKRKNLESVLLVMQQKIGQMQ 147
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A068S4K0_9FUNG (Prefoldin-domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S4K0_9FUNG)

HSP 1 Score: 119 bits (297), Expect = 4.270e-31
Identity = 69/152 (45.39%), Postives = 102/152 (67.11%), Query Frame = 1 
Query:   13 GQLQQQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGA-VENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQAE 465
            G  QQQ+++++ L L  L QVKT+ EEE+  L+ ++ KLR AQARFS+   +VE+L+    ++K ILVPLT SLYVPG++ + +K++VDVGTGYYVEK       F   K++ V  NLE L+ T + K+ +L  IV+VM+ K+ + Q   A+
Sbjct:    2 GSQQQQTVNITDLDLPSLQQVKTQLEEELSHLTQSYGKLRGAQARFSDCADSVESLKSEKADDKTILVPLTSSLYVPGKLSDVEKVIVDVGTGYYVEKSLDGATSFYKTKEEYVKQNLEKLQETINGKQSSLRAIVNVMQDKVQQQQAAAAK 153
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: A0A1E7EUB6_9STRA (Prefoldin alpha subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUB6_9STRA)

HSP 1 Score: 119 bits (297), Expect = 5.990e-31
Identity = 58/143 (40.56%), Postives = 102/143 (71.33%), Query Frame = 1 
Query:   31 SIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQTKQ 459
            +IDL  LSL++LNQ K + E +++ L++++ +LR A AR + S +A+  L  + E KE+++PLT+S+YVPG++ EP+++LV++GTG+YVEK+  +T++FL RK  IV  N E++       R+N++++   M+ K+ EI+ +Q
Sbjct:   10 TIDLDKLSLDELNQAKQQEEGKLQALTNHYAQLRAAAARLTASTNAISELSPSSEGKEVMIPLTESVYVPGKLREPNRLLVEIGTGFYVEKESSETIDFLERKLKIVDANSENITKAVQATRQNIDSVNMSMQGKMTEIRARQ 152
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BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Match: M4B879_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B879_HYAAE)

HSP 1 Score: 117 bits (294), Expect = 1.140e-30
Identity = 62/139 (44.60%), Postives = 99/139 (71.22%), Query Frame = 1 
Query:   34 IDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARFSESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVEKDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQ 450
            ++L  LSLEQL+ +KT+ E+E++ L+ +F  LR+AQ+RFSES +A++++     NK++LVPLT SL++PG+I   D +LVDVGTGY+VE+   K  +F+ RK + + +N E L+   D KR  LE ++ +M++K+ E Q
Sbjct:    8 VNLVDLSLEQLSSLKTQLEKELQQLTVSFRGLREAQSRFSESKAALQSMAAVDLNKDVLVPLTASLFIPGKIASKDDVLVDVGTGYFVEQSISKAEQFMDRKVEFLQSNTEQLKTVVDGKRNTLEAVLMIMQQKVQEAQ 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12588.1927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL05_ECTSI1.850e-7577.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFR4_9STRA2.920e-4651.97Prefoldin subunit-domain-containing protein n=1 Ta... [more]
A0A7S2C3Z7_9STRA3.330e-3444.59Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3NIR8_9STRA5.230e-3345.64Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZUY5_9STRA1.190e-3141.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YDJ5_AURAN1.460e-3142.48Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2P6NP58_9EUKA2.930e-3143.84Prefoldin subunit 5 n=1 Tax=Planoprotostelium fung... [more]
A0A068S4K0_9FUNG4.270e-3145.39Prefoldin-domain-containing protein n=2 Tax=Lichth... [more]
A0A1E7EUB6_9STRA5.990e-3140.56Prefoldin alpha subunit n=1 Tax=Fragilariopsis cyl... [more]
M4B879_HYAAE1.140e-3044.60Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12588contigH-elongata_contig12588:3417..8069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.7
Seed ortholog evalue1.6e-59
Seed eggNOG ortholog2880.D8LL05
Preferred namePFDN5
KEGG rclassRC00055,RC00523
KEGG koko:K01881,ko:K03678,ko:K04797,ko:K09504
KEGG ReactionR03661
KEGG Pathwayko00970,ko03018,ko05203,map00970,map03018,map05203
KEGG ModuleM00359,M00360,M00391
GOsGO:0001654,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007021,GO:0007275,GO:0007423,GO:0008092,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0015631,GO:0016043,GO:0016272,GO:0019219,GO:0019222,GO:0022607,GO:0023051,GO:0023057,GO:0030111,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032153,GO:0032501,GO:0032502,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0034243,GO:0034622,GO:0043010,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051286,GO:0060041,GO:0060255,GO:0060828,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0090090,GO:0140110,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.sister chromatid segregation
EggNOG OGsCOG1730@1,KOG3048@2759
EC6.1.1.15
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03019,ko03029,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPrefoldin
Ec32 orthologEc-11_006250.1
Exons4
Model size507
Cds size507
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12588.1927.1prot_H-elongata_contig12588.1927.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12588 3417..8069 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929744.6314673-CDS-H-elongata_contig12588:3416..35841622929744.6314673-CDS-H-elongata_contig12588:3416..3584Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 3417..3584 -
1691679140.7743514-CDS-H-elongata_contig12588:3416..35841691679140.7743514-CDS-H-elongata_contig12588:3416..3584Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 3417..3584 -
1622929744.6444502-CDS-H-elongata_contig12588:4222..43511622929744.6444502-CDS-H-elongata_contig12588:4222..4351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 4223..4351 -
1691679140.7849598-CDS-H-elongata_contig12588:4222..43511691679140.7849598-CDS-H-elongata_contig12588:4222..4351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 4223..4351 -
1622929744.6563563-CDS-H-elongata_contig12588:5207..52761622929744.6563563-CDS-H-elongata_contig12588:5207..5276Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 5208..5276 -
1691679140.798378-CDS-H-elongata_contig12588:5207..52761691679140.798378-CDS-H-elongata_contig12588:5207..5276Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 5208..5276 -
1622929744.671487-CDS-H-elongata_contig12588:7928..80691622929744.671487-CDS-H-elongata_contig12588:7928..8069Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 7929..8069 -
1691679140.8077998-CDS-H-elongata_contig12588:7928..80691691679140.8077998-CDS-H-elongata_contig12588:7928..8069Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12588 7929..8069 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12588.1927.1

>prot_H-elongata_contig12588.1927.1 ID=prot_H-elongata_contig12588.1927.1|Name=mRNA_H-elongata_contig12588.1927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
MAEEGQLQQQSIDLSVLSLEQLNQVKTKHEEEVKVLSSNFVKLRDAQARF
SESISAVETLRGAVENKEILVPLTQSLYVPGRIVEPDKMLVDVGTGYYVE
KDRQKTVEFLSRKKDIVTTNLESLRNTTDLKRKNLETIVSVMRRKIAEIQ
TKQAEFRGNEDGSAVATT*
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mRNA from alignment at H-elongata_contig12588:3417..8069-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12588.1927.1 ID=mRNA_H-elongata_contig12588.1927.1|Name=mRNA_H-elongata_contig12588.1927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4653bp|location=Sequence derived from alignment at H-elongata_contig12588:3417..8069- (Himanthalia elongata Himel1 dioecious)
ATGGCAGAGGAAGGACAGCTACAACAGCAGAGCATCGACCTGTCTGTTCT
CTCGCTGGAGCAGTTGAACCAGGTGAAGACTAAGCACGAAGAGGAGGTGA
AGGTTCTGTCAAGCAATTTCGTCAAGCTCAGAGACGCACAGGTACGATCT
AATCCAGATACTGCTCTAAAAGACGGGCTGTTGATTCCCATACATGAACC
GCGTGGATCCACCAGGATTAAATGATATTTAGGTTTTCCCTCTAGACTAA
TGCAAAACCTTGTGTCTAGTTGTTAAATTGCGCATAACTGCGCAATCTGG
AGGTTAGTTTCCTGAACATAGTTTTGGTTGGAAATGTGCGTGCATTCCAC
CACAAATAATTTCCACACTTTCACGGCTCTCGGCCATGACGTCACTCCCT
CTCCATCGACATCAACATTAAGTACATAACGTCACAGCGCTCCGCCTAGG
GAAAATTATCGGGAGGAAAACGCGGAAAAAATTGTGAGTGTTTTTAAATT
GCACATGACCGCGCAATCCGGCCCTGGCATGCTAGTCATTCTAGGCTACT
CTCGCATTGATCCTTCCAACGGGGATCAACCATATTTGCTACAAAAACCT
CTATTAATTATAAGACGTGGCAAAGGAGACATACTACCTCAACAGTTCGT
ATCTAAACCATCAACAATCAATACCTTGCGCTTCCTTTTCTGCTTCCTTG
TTCGCTATATAGCTGTATCGCTTCGGTCGGCCCCTATTTGACCAACGCTC
TCCCGTCTACCCTTTTTGCTACTGCTACCCAAATCTACCCCGTTTTCTAC
CATCTTAGGCTTCTTCGACCCCCATCTCCTCTCCCCTCCCCGATCCCGCC
CCTCGCTTCCCGCCCCTGGGTTTTGAACATGCACGTGACACGACATTCAC
GCTGGGGCGTCGAGTCTTGTGGTTGTGGATGCATATTATCCGTTGGGACA
CTCCCTTTCTCGCGTCTTCCTCCCCACCTATACTCTACTCTCTCTTGGAA
AAAAACTCCCTCTCTCTCCCATCTACCCTCCGCTCCGTTCTCGTCTCTAT
CCCCGTCTCTTCCCCATTCGCCGACTCCGTTCTCGTCCCCGCTCCCGTTT
CCATCCCCTGTCCCCTCCTCAGTCCCCGTCCTTATCCCCATCACCATTCC
CGTCCCCGTTTTCATCTTGATCCCCATCCCCGTTCTCACCCCTTTCCCAG
TCTCAATCCCCGTTTCTGTTCCCCTCCTTATCCCAATACCCGTCTTCGTC
CTCATCCACTTTCCCCTTCCCCGTCCTCGGTTCCGTATCGGTTCCCGTCC
GCATCCCTGTTCCCGTTACCATCGACATCTTCATCCCCGTTATCGTTTCT
TCCTTCCCGTCTTCTGGGGCCAGGTTCTTCTCTTGGTACGGCATGGTCGG
ACAGGGGCCGGATCTTGCACCCGAAGCTCACGGCTGCCTACAAGCGCTAC
CCCCTGTTTGTTCATTTTCCCGTCGCCGTTTCTTCCTTCCAGTTCAATTG
CACATAACCGCTAAAGGAATCCGGCCCTGTAATGCTAGTCCTTCTAGGCT
TTACACATTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGCTCTTCACTTTACCGAGGGGACCTCAATTTTT
TTTTTTTCGATAGACGCTTGTACGACGAGGGTTCAAAAATCATAAATATG
GCCTCGCTTCCTTGGGGCAACTTGTCACTACTTGCGTCTGATACCCAAAA
TCATAAATATTTCGAATAATACAAAGCTTTCGGCGATCTCAAATTTTAAC
GCATTTCCTCGTTTACACGTTTTCGATAAAACCGTGGGAATTATTTAGAT
CCGGTCTTGGAGAACGTTATTTTGTGGAATTGTTGAGATTTACTTATCAT
TTCTTCCTTTTCAACCCCAAAATATTTAAGCGGACTCGAACTTTTACATG
CCCCACACCCCGTTCACATTGTCTATTGCAGCTAAGGCATGAAAACTTGC
GTACAACCTCCCTCCCCCGGCCGTGTCGAATCCACACACCCGTTGTAATG
CCGTAATTAACATCGGAGTTCCATGCATTGCGAGGCTTGCCAAATATAAG
AGCAGGATGAAAATCGAACTCGACATAGTAATCGGACGGCCTCGAAACAT
CTGTTCACAATCAGTCCTGGCAAGGTTCGCGATATCGCGCACGCGCGTTG
CTCTATGTCTCCTGGAAGGCTGTAGCAGTAAGAATCAGGCTTAGCCGCGT
GTTAGCGTGGACGAGACGCGTCGCGCTACGGATGATGACCTTGACCCAAT
CCTCGGCGCAGGAGCGGTGATGGTGGCAGTTGCAACCTTTTATACTGACC
AATTGTCTTACTTCTTGTGATGGTTGGAGTCGTTGTCATAGGAGTTCTAT
TAATAGTACTCTGCTTCCGGTATATCGGTATATGTGATGACCAGACGCAA
CCGCCCCTCACCATCACTGTATTGATCGACGAGCTACGACAGCGTTAAAT
TTATTTTTACTGCTGATAAATTAAATATGACGGTCCTGTTTTGACAAAAA
AAAAAAACTACCGCTAACCCGAGCCTGAGGCATTCACCCCTTCGCTTCCG
CTATAAAAAAGAGTGCGCGTGACGTCTTGAGGGTATCCTAGAGCCCTGGG
GCCTGTGTGGCGGAGTAGAAGCTCTCAGCCCAAGTCTAAACAAGCGTTAT
CCGTTGAATGAATACCCCTCCGAGGACTTACTGACCTAAGTGTTATGCCT
ATCTGCCCTTGCCTTTTATTTATGTGATTGTTGGGATTCGAAGGCTCGGT
TTTCGGAATCTATTTCTGCCGTGGAGACTTTGAGGGGTGCGGTGGAGAAC
AAGGAAATCCTGGTGAGGTCACGATGAAACCGCCCCAGCTCTATGCAGCC
TCACGAGCTGTAGTGTGCCACGCTACCCAGCACACGGCGAGTTTGACCAA
AGTTATCCTGAGAGGTTTTCCTAAGTGCGGCAGCGGCAGGCTACAAAATG
TCCGGAAATAATATGTTAGTACTCTACCGAATCATGTACGGAAAATAAGG
TCATAAAAGTAGAACGGATAAACAACTTGATCGTTCGTTCAGCTAGTACT
GGAAATCTTGGGGTCCTAAGTAAGGATATAAATTGTTTGTTCTGTTGAGC
TAGGTGGTGATGATGTTTCAGCCTTTTTGCTCACTCCACCATTCAACCAC
CCAAGACACCGATAAGTCTGAGATCCAGCCTGTGAGTGAGTCTGAGAGTC
TGCACAGTTGTGTCCTTTCCTGTGTGAGAGTTGGGCAAGCTGTAAGTAGA
CTGTAGTGGTGTTACTAGTTGAGCTGTGTTGTAAGTGTACAATTTTAGAG
AGGTGCTTTGTATTCTCTTGGTGTGAGTGTGACGAATCTAATAAAAGAAA
CTTCTGAGACTTCTAATCTGAGACATTACTGCCAGGATACGCCGTAGAGT
GGTGCACACGCTGACGGAGGAGCCGTATCGATTAATACAGAACCTCCAAA
CCCCTAGGACACAGAAATCACCGACACGAGAAATCACAGACACAAAATGC
TCGGATCAGCGGCAACGCTTGGCCGATGTCTCGCAACACGATTACCACGA
TCGGGTCCCGAGGAGCAAGATGTGCGCTCCTGATCCCAGGTTCACGATCT
CTCCCCTCTTCGAAGAGTTCCCATTGCTGCTTCTCCCTTCCTGTGCTACG
TGACATATGTCGCCCCAGGTACCGTTGACACAATCCCTCTATGTCCCGGG
TCGGATCGTGGAGCCCGACAAGATGCTGGTGGATGTGGGAACGGGGTACT
ACGTCGAAAAGGATCGTCAGAAGACCGTCGAATTCTTGTCCAGAAAGGTG
GGTGTTAATATGTCAATATGTGTGTAAGGTGTTTGTGTGAGAAAGAGAGA
GGATATGTCCATTGGGGGTGAAGAGGAGGTTAGGTTCAACCTTGAACCTA
GAATTGGTTCGATGTCCTTCAGCAATTAGCGGAAGCAGTGATTTTTGAAA
GAAAAGTGACGTGCGAAGCCAAGCTCATTTGTTCATTATGATCACTTCCT
TTAACTAAGGTGAGCGTCCATTCTCTACCCTTCGCTCCTTTTTCAGTGTG
TCCGCTTAACCCTGTTTTTTTTGTTAAATAGGATTGTGTACAAAAAAATA
AAACCGATGAGCGGGTTGAAACATATATCAACCGATAAAAACACTTCCCC
GAGCCCGTACCGCCTGGTTTGTTGTAAAAACCAAGGCTTTAATTTTTTCT
TCTTGAGAAAAAGACTTTGTTCTCAGCCAGACCCTGCGATACAGCAAAAT
GAGGCACCCGCTCCGAGCGGTACGAAAATGTTGTGCCCTGACTGCTACGG
TCTTTGTCTTTTGATTACACCTCAATCCGTGTTAATTTTCATTTTATATT
TGACTGAAAGACCCCTGCCCGCGACACCCCTTGTCTCTCGATTGCATCGC
CATCCATGATAAATATGGATGTCGAATTTTGACAGAAAGACATAGTCACG
ACGAACTTGGAGTCTCTGCGAAACACAACCGACCTCAAGCGGAAGAACCT
CGAGACGATCGTTTCGGTCATGCGAAGAAAAATCGCCGAAATCCAAACCA
AGCAGGCGGAGTTTCGGGGTAACGAAGACGGCTCGGCGGTAGCAACCACC
TGA
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Coding sequence (CDS) from alignment at H-elongata_contig12588:3417..8069-

>mRNA_H-elongata_contig12588.1927.1 ID=mRNA_H-elongata_contig12588.1927.1|Name=mRNA_H-elongata_contig12588.1927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig12588:3417..8069- (Himanthalia elongata Himel1 dioecious)
ATGGCAGAGGAAGGACAGCTACAACAGCAGAGCATCGACCTGTCTGTTCT
CTCGCTGGAGCAGTTGAACCAGGTGAAGACTAAGCACGAAGAGGAGGTGA
AGGTTCTGTCAAGCAATTTCGTCAAGCTCAGAGACGCACAGATGGCAGAG
GAAGGACAGCTACAACAGCAGAGCATCGACCTGTCTGTTCTCTCGCTGGA
GCAGTTGAACCAGGTGAAGACTAAGCACGAAGAGGAGGTGAAGGTTCTGT
CAAGCAATTTCGTCAAGCTCAGAGACGCACAGGCTCGGTTTTCGGAATCT
ATTTCTGCCGTGGAGACTTTGAGGGGTGCGGTGGAGAACAAGGAAATCCT
GGCTCGGTTTTCGGAATCTATTTCTGCCGTGGAGACTTTGAGGGGTGCGG
TGGAGAACAAGGAAATCCTGGTACCGTTGACACAATCCCTCTATGTCCCG
GGTCGGATCGTGGAGCCCGACAAGATGCTGGTGGATGTGGGAACGGGGTA
CTACGTCGAAAAGGATCGTCAGAAGACCGTCGAATTCTTGTCCAGAAAGG
TACCGTTGACACAATCCCTCTATGTCCCGGGTCGGATCGTGGAGCCCGAC
AAGATGCTGGTGGATGTGGGAACGGGGTACTACGTCGAAAAGGATCGTCA
GAAGACCGTCGAATTCTTGTCCAGAAAGAAAGACATAGTCACGACGAACT
TGGAGTCTCTGCGAAACACAACCGACCTCAAGCGGAAGAACCTCGAGACG
ATCGTTTCGGTCATGCGAAGAAAAATCGCCGAAATCCAAACCAAGCAGGC
GGAGTTTCGGGGTAACGAAGACGGCTCGGCGGTAGCAACCACCTGAAAAG
ACATAGTCACGACGAACTTGGAGTCTCTGCGAAACACAACCGACCTCAAG
CGGAAGAACCTCGAGACGATCGTTTCGGTCATGCGAAGAAAAATCGCCGA
AATCCAAACCAAGCAGGCGGAGTTTCGGGGTAACGAAGACGGCTCGGCGG
TAGCAACCACCTGA
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