mRNA_H-elongata_contig120681.1587.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: D8LH91_ECTSI (Putative Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH91_ECTSI) HSP 1 Score: 289 bits (739), Expect = 1.630e-97 Identity = 129/143 (90.21%), Postives = 134/143 (93.71%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
KGFGILELAGGLVPQG LVKTARAGWKF+WLQMMRELAPQSPDG+YVRP+YGFRGWIGRG FPVE RYHVYVGNTCPWCHRAVLA+VLR LSP VTFSYMDDNPDKASRGGWAFT +EPDPVFGCNDLREVYE CSPGF GR
Sbjct: 72 KGFGILELAGGLVPQGGLVKTARAGWKFVWLQMMRELAPQSPDGAYVRPNYGFRGWIGRGAFPVEPGRYHVYVGNTCPWCHRAVLAVVLRGLSPAVTFSYMDDNPDKASRGGWAFTRDEPDPVFGCNDLREVYETCSPGFKGR 214
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A6H5JJJ6_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ6_9PHAE) HSP 1 Score: 290 bits (741), Expect = 1.310e-94 Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 1
Query: 40 HDAK---GFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
HD K GFGILELAGGLVPQG LVKTARAGWKF+WLQMMRELAPQSPDG+YVRP+YGFRGWIGRG FPVE+ RYHVYVGNTCPWCHRAVLA+VLR LSP VTFSYMDDNPDKASRGGWAFT +EPDPVFGCNDLREVYE CSPGF GR
Sbjct: 66 HDTKLNKGFGILELAGGLVPQGGLVKTARAGWKFVWLQMMRELAPQSPDGAYVRPNYGFRGWIGRGAFPVESGRYHVYVGNTCPWCHRAVLAVVLRGLSPAVTFSYMDDNPDKASRGGWAFTRDEPDPVFGCNDLREVYETCSPGFKGR 214
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A835ZE16_9STRA (Glutathione S-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE16_9STRA) HSP 1 Score: 211 bits (538), Expect = 7.260e-65 Identity = 94/144 (65.28%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPG-VTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
KGF +LELAGG+VPQG LVK AR W +W MM ELAPQ P G+YVRPSY F+G IG +FP E RYHVY+G CPWCHR L + LR L+ G +TFSYM D+P++ASRGGW+FT E+PDPVFGC DLREVY+ CSPG+ GR
Sbjct: 15 KGFRVLELAGGVVPQGALVKVARFVWGTLWRIMMAELAPQDPTGAYVRPSYDFKGVIGSPQFPAEPGRYHVYLGQACPWCHRVSLTLALRSLNNGGITFSYMCDDPERASRGGWSFTEEQPDPVFGCGDLREVYQRCSPGYEGR 158
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A7S2V351_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V351_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.540e-59 Identity = 92/149 (61.74%), Postives = 106/149 (71.14%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRG-RFPVEADRYHVYVGNTCPWCHRAVLAIVLRKL-----SPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
+G ILELAGGLVPQG LVKTAR GW+ +W M+ ELAPQS DG+Y RPSY F G I FPVE+ RYH+Y GN CPWCHR +L LR L P +T S + D+P++ASRGGWAF PDP FGC DLREVY+ CSPGFTGR
Sbjct: 73 RGLRILELAGGLVPQGALVKTARTGWRELWKAMISELAPQSKDGAYQRPSYSFNGKISESSEFPVESGRYHLYTGNACPWCHRVLLVAKLRGLLDGEKGPFLTHSILSDDPERASRGGWAFDKSRPDPAFGCRDLREVYDLCSPGFTGR 221
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: B7G1M7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1M7_PHATC) HSP 1 Score: 195 bits (495), Expect = 3.450e-58 Identity = 87/143 (60.84%), Postives = 108/143 (75.52%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
KGF +LELAGG+VPQG LVKTA+ GWKFIW +MM ELAPQ G+Y RPSY F+G +G FP EA RYH+Y+GN CPWCHR +LA+ L L G++ + ++DNP+KASRGGW F+ + DP FG DLREVY+ SPG+ GR
Sbjct: 60 KGFNLLELAGGVVPQGNLVKTAKEGWKFIWKRMMAELAPQDETGNYQRPSYKFQGRLGTTEFPDEAGRYHLYLGNPCPWCHRCLLAVNLLNLRDGISLTRLEDNPEKASRGGWIFSATDRDP-FGNKDLREVYDQLSPGYRGR 201
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A8J9WKW6_9CHLO (Glutathione S-transferase omega-like 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKW6_9CHLO) HSP 1 Score: 191 bits (484), Expect = 2.650e-56 Identity = 81/144 (56.25%), Postives = 106/144 (73.61%), Query Frame = 1
Query: 46 AKGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
+KGFG+LE G ++ QG LVK A+ GW F W MM+ELAPQ+ DGSY RP+Y +G IG FP E RYH+YVGN CPWCHR +LA+++R L P ++F+ D+P++ASRGGW F ++P+PVF DLREVY+A SPG+ GR
Sbjct: 58 SKGFGLLEWTGKIISQGTLVKGAKTGWNFAWETMMKELAPQTKDGSYARPTYNLKGVIGSPEFPAETARYHLYVGNACPWCHRVLLALIIRGLLPHISFTLAVDDPERASRGGWVF--DQPEPVFNAKDLREVYDAASPGYRGR 199
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A7S4FIS6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FIS6_9EUGL) HSP 1 Score: 189 bits (479), Expect = 4.050e-56 Identity = 87/145 (60.00%), Postives = 102/145 (70.34%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPG--VTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
KGF +LELAGGLVPQG V T +AGW+F+W +MM ELAPQ G+Y RP YGF+ IG PVE+ RYHVY+GN CPWCHR L LR L VT S M D+P KASRGGWAF+ E PDP+F DLR+VY+ SPG+ GR
Sbjct: 185 KGFNLLELAGGLVPQGVFVGTVKAGWRFVWSRMMAELAPQDKTGAYQRPKYGFQEQIGSAAHPVESGRYHVYLGNPCPWCHRVALVSALRGLEEEGHVTTSLMLDDPIKASRGGWAFSDERPDPIFEAKDLRQVYDLLSPGYKGR 329
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A5J4XXL2_9CHLO (GST N-terminal domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XXL2_9CHLO) HSP 1 Score: 187 bits (476), Expect = 1.060e-55 Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
KG GILE G LVPQG LVK A+ GWK W MM+ELAPQ+ DGSY RPSY F+ IG FPVE+ RYH+YVGN CPWCHR VLA+++R L+ ++ ++ D+P++ASRGGW F P+PVFG NDLREVY+A + GR
Sbjct: 30 KGLGILEWTGSLVPQGLLVKGAKNGWKLAWKTMMKELAPQTADGSYSRPSYDFQARIGDANFPVESGRYHIYVGNACPWCHRVVLALIVRGLTEHISVTWAADDPERASRGGWVFN--SPEPVFGKNDLREVYDAAQTRYKGR 170
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: A0A2P6VFB3_9CHLO (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFB3_9CHLO) HSP 1 Score: 193 bits (490), Expect = 2.260e-55 Identity = 82/143 (57.34%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 49 KGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
+G G+LE G +VPQG LVKTA+ GW+ W +M ELAPQS DGSY RP+Y F G +G FP+EA RYH+YVGN CPWCHR +LA+ + L+ +++S D+P++ASRGGW F + DPVFGC DLREVY+ SPGF+GR
Sbjct: 272 RGLGVLEWTGAIVPQGMLVKTAKLGWRTAWQALMTELAPQSKDGSYQRPAYAFGGRLGTPEFPLEAGRYHLYVGNPCPWCHRVLLALAVTGLAGAISYSRATDDPERASRGGWVFDGPQGDPVFGCKDLREVYDLLSPGFSGR 414
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Match: E1Z5X8_CHLVA (GST C-terminal domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5X8_CHLVA) HSP 1 Score: 188 bits (478), Expect = 3.250e-54 Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 52 GFGILELAGGLVPQGRLVKTARAGWKFIWLQMMRELAPQSPDGSYVRPSYGFRGWIGRGRFPVEADRYHVYVGNTCPWCHRAVLAIVLRKLSPGVTFSYMDDNPDKASRGGWAFTPEEPDPVFGCNDLREVYEACSPGFTGR 477
GF +LE G LVPQG LVKTA+ GW+ W +M ELAPQS DG+Y RPSY F+G +G FP+E RYH+YVGN CPWCHR +LA+V+ L ++FS D+P++ASRGGW F + DPVFGC DLREVY+ SPGF+GR
Sbjct: 42 GFRVLERTGALVPQGLLVKTAKYGWRTAWQTLMTELAPQSKDGTYQRPSYSFQGRVGSPEFPLEPGRYHLYVGNACPWCHRVLLALVVSGLEGHISFSRAVDDPERASRGGWVFDGK--DPVFGCRDLREVYDLLSPGFSGR 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120681.1587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120681.1587.1 >prot_H-elongata_contig120681.1587.1 ID=prot_H-elongata_contig120681.1587.1|Name=mRNA_H-elongata_contig120681.1587.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp PPPSPRSPPNYLYHDAKGFGILELAGGLVPQGRLVKTARAGWKFIWLQMMback to top mRNA from alignment at H-elongata_contig120681:316..1567+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120681.1587.1 ID=mRNA_H-elongata_contig120681.1587.1|Name=mRNA_H-elongata_contig120681.1587.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1252bp|location=Sequence derived from alignment at H-elongata_contig120681:316..1567+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120681:316..1567+ >mRNA_H-elongata_contig120681.1587.1 ID=mRNA_H-elongata_contig120681.1587.1|Name=mRNA_H-elongata_contig120681.1587.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at H-elongata_contig120681:316..1567+ (Himanthalia elongata Himel1 dioecious)back to top |