mRNA_H-elongata_contig120508.1574.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 8.090e-18 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 4 PLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFVR 189
PL WW++K ++YP LA+LARRVL IPA QAQSER+FSSAGL+V+K + PE+V L+VF+R
Sbjct: 480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLR 541
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 9.700e-18 Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFVR 189
+PL WW+++ D+P LANLARRVLAIPA+QA+SERLFS AG IV+K N L+P V+LLV +R
Sbjct: 222 DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLR 284
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A1A8CIX7_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CIX7_9TELE) HSP 1 Score: 74.7 bits (182), Expect = 3.650e-16 Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFVR 189
+PL WWK+ YP+LA+LA+ L IPA+ SER+FS+AG IVS + ++++PEHV +LVF++
Sbjct: 22 SPLEWWKVNAYAYPILASLAKAYLCIPATSVPSERVFSTAGDIVSAQRSLITPEHVDMLVFLK 84
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 74.7 bits (182), Expect = 4.870e-16 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVF 183
NPL WWK +P LA+LA+ L +PA+ SERLFSSAG IVSK+ LSPEH+ +L F
Sbjct: 32 NPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTF 92
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE) HSP 1 Score: 75.1 bits (183), Expect = 1.130e-15 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFV 186
+PL+WWK + +P LA LA +L IPA+ SERLFS+AG IVSK+ LSPEHV +L F+
Sbjct: 78 DPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDMLTFL 139
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A1A8S6F3_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8S6F3_9TELE) HSP 1 Score: 72.0 bits (175), Expect = 4.240e-15 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFV 186
+PL+WWK + + LA LA +L IPA+ SERLFS+AG IVSK+ LSPEHV +L F+
Sbjct: 19 DPLIWWKANEQRFTTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDMLTFL 80
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A3N0Y7A2_ANAGA (Zinc finger BED domain-containing protein 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0Y7A2_ANAGA) HSP 1 Score: 76.3 bits (186), Expect = 5.200e-15 Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFV 186
NPL+WWK N YP+LA LA+ L IPA+ SERLFS+AG I SK+ LS EHV +L F+
Sbjct: 232 NPLLWWKANNDRYPMLARLAKSYLCIPATSTPSERLFSAAGNIASKKRATLSQEHVDMLTFL 293
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: A0A1A8KW61_NOTKU (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8KW61_NOTKU) HSP 1 Score: 72.8 bits (177), Expect = 5.930e-15 Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFVR 189
NPLVWW+ K+YPLLA +A+R L +P + SER+FS+AG I++ + + L+P HV L+F++
Sbjct: 60 NPLVWWRENEKEYPLLARMAKRYLCVPETSVASERVFSTAGDIITAKRSCLTPGHVNQLLFLQ 122
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 7.640e-15 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFVR 189
NPL W+ K +YPLLA LARRVLAIP+SQAQSER+FS+AGL V+ + L E+V+LLV++R
Sbjct: 482 NPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLR 544
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Match: UPI00165BA612 (zinc finger BED domain-containing protein 1 isoform X1 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165BA612) HSP 1 Score: 76.6 bits (187), Expect = 7.710e-15 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNILSPEHVQLLVFV 186
NPL+WWK N+ YP+LA LA+ L IPA+ SERLFS+AG I SK+ LS EHV +L F+
Sbjct: 494 NPLLWWKANNERYPMLARLAKSFLCIPATSTPSERLFSAAGNIASKKRASLSQEHVDMLTFL 555 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120508.1574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120508.1574.1 >prot_H-elongata_contig120508.1574.1 ID=prot_H-elongata_contig120508.1574.1|Name=mRNA_H-elongata_contig120508.1574.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp NPLVWWKIKNKDYPLLANLARRVLAIPASQAQSERLFSSAGLIVSKRHNIback to top mRNA from alignment at H-elongata_contig120508:471..659- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120508.1574.1 ID=mRNA_H-elongata_contig120508.1574.1|Name=mRNA_H-elongata_contig120508.1574.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=189bp|location=Sequence derived from alignment at H-elongata_contig120508:471..659- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120508:471..659- >mRNA_H-elongata_contig120508.1574.1 ID=mRNA_H-elongata_contig120508.1574.1|Name=mRNA_H-elongata_contig120508.1574.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig120508:471..659- (Himanthalia elongata Himel1 dioecious)back to top |