mRNA_H-elongata_contig12004.1549.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12004.1549.1
Unique NamemRNA_H-elongata_contig12004.1549.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12004.1549.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 5.860e-102
Identity = 184/297 (61.95%), Postives = 217/297 (73.06%), Query Frame = 1 
Query:    1 CRFFFVLSRACLLRSAQCDDIEAYFGDVGSVSEIDLGSVIRVDCPANDDGGPLEEILIASGTSLTIKSTQDFVRFVNVKFTVEEGATLVFDIPITRFGPNSGDSEGGTGYMLDVYDDASVTFMGKFRASQIENIRSVFYNSGSIDFKGDSLFNNNGNVFRSNSNGXXXXXXXXXXXXXSWLALDLIGSDSFVRQMFSKTATFDNNAGNFDGATGCAVDNSEGTVIFRDDAYFSNHRCDEGSAVYNGGTMKFYGKVEFEGNNGQRVWGGGLRNGA-------GSILFKKAVQFNRNDA 870
            C    +   A  +RS +CDDI+AYFGDV SV+EIDLG++IRVDCP+NDD   L  I I SG +LT+KS + FVRFVN++F VEEGA+L+FD+P+TR GPNSG SEG   ++ DV +  S+TF GKFRASQ+ N+RSVFYN GSI+FK DSLFNNNGNVFRSN   XXXXXXXXXXXXX     +  G DSFVR  FSKTATF +NAG FDGA GCA+DN  GT IFRDDA FS+H CDEG+AV N G M+FYGK  F  N   R  GGG+ N A       G ++FK AVQFNRN A
Sbjct:    9 CALLALALMASTVRSQECDDIDAYFGDVSSVTEIDLGTIIRVDCPSNDDAEELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSGQSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXN-DGEDSFVR--FSKTATFIDNAGFFDGAWGCAIDNG-GTAIFRDDAVFSDHDCDEGAAVSNTGKMRFYGKAYFSDNRNYRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTA 301
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BLAST of mRNA_H-elongata_contig12004.1549.1 vs. uniprot
Match: A0A6H5KB90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB90_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 4.140e-60
Identity = 117/184 (63.59%), Postives = 145/184 (78.80%), Query Frame = 1 
Query:   28 ACLLRSAQCDDIEAYFGDVGSVSEIDLGSVIRVDCPANDDGGPLEEILIASGTSLTIKSTQDFVRFVNVKFTVEEGATLVFDIPITRFGPNSG-DSEGGTGYMLDVYDDASVTFMGKFRASQIENIRSVFYNSGSIDFKGDSLFNNNGNVFRSNSNGXXXXXXXXXXXXXSWLALDLIGSDSFV 576
            A  +RS +CDDI+AYFGDV SV+EIDLG++IRVDCP+ DDG  L  I I SG +L +KS + FVRFVN++F VEEGA+L+FD+P+TR GPNS  D E  + ++ DV +  S+TF GKFR+SQ+ N+RSVFYN GSI+FK DSLFNNNGNVFR+N   XXXXXXXXXXXXX +LA+   G DSFV
Sbjct:   18 ASTVRSQECDDIDAYFGDVSSVTEIDLGTIIRVDCPSTDDGEELPYITIESGKTLAVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSVVDPESASDFVFDVAEGGSLTFNGKFRSSQVFNVRSVFYNRGSIEFKDDSLFNNNGNVFRNNEX-XXXXXXXXXXXXXXYLAIVNDGEDSFV 200
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BLAST of mRNA_H-elongata_contig12004.1549.1 vs. uniprot
Match: A0A6H5L091_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L091_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.510e-34
Identity = 111/298 (37.25%), Postives = 156/298 (52.35%), Query Frame = 1 
Query:   43 SAQCDDIEAYFGDVGSVS---EIDLGSVIRVDCPA--NDDGGP--LEEILIASGTSLTIKSTQDFVRFVNVKFTVEEGATLVFDIPITRFGPNSGDSEGGTGYM---LDVYDDASVTFMGKFRASQIENIRSVFYNSGSIDFKGDSLFNNNGNVFRSNSNGXXXXXXXXXXXXXSWLALDLIGSDSFVRQMFSKTATFDNNAGNFDGATGCAVD--NSEGTVIFRDDAYFSNHRCDEGSAVYN-GGTMKFYGKVEFEGNNGQRVW---------GGGLRNGAGSILFKKAVQFNRNDA 870
            SA CDD++ Y G    ++   EIDL  V  V+C     D G    LE+I+I  G S+T+KS+  +VRFVN++F V+ GATLVFD+P T FGPN+   EG   Y    ++V + A+VTF+G   AS + N  + FYN GS++F+  +LF +   VF  N  G              + A+  I S  ++R  FSK   FD N+   D    C++   + E  ++ R DA F NH C  G A++   GT KFYGK  F  N+  +           GG +    G++ F  AVQFN N A
Sbjct:   19 SAACDDVDNYLGIPNPLTGDMEIDLEGVSSVECAEIETDAGNEILLEQIVIDGG-SVTLKSSS-YVRFVNIEFDVKPGATLVFDMPETYFGPNTARKEGTWYYNSFGMNVDEGATVTFVGGVVASDVSNAFTAFYNRGSMEFQETALFEDGTYVFYENQ-GTIKFRGDATFRNNRFHAIQNIFS-GYIR--FSKDVLFDGNSYETDIIGTCSLSCIDEESRIVVRGDAVFQNHNC-PGVALWQLYGTTKFYGKAYFNNNSRDKTTFDYNLDGNLGGAVVVSGGTMTFNGAVQFNDNSA 309
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12004.1549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHY2_ECTSI5.860e-10261.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB90_9PHAE4.140e-6063.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L091_9PHAE2.510e-3437.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12004contigH-elongata_contig12004:2042..6727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPectin lyase fold/virulence factor
Ec32 orthologEc-12_006330.1
Exons11
Model size993
Cds size993
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929703.8912117-CDS-H-elongata_contig12004:2041..22621622929703.8912117-CDS-H-elongata_contig12004:2041..2262Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 2042..2262 +
1691679125.2830377-CDS-H-elongata_contig12004:2041..22621691679125.2830377-CDS-H-elongata_contig12004:2041..2262Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 2042..2262 +
1622929703.9232411-CDS-H-elongata_contig12004:2790..28751622929703.9232411-CDS-H-elongata_contig12004:2790..2875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 2791..2875 +
1691679125.2911768-CDS-H-elongata_contig12004:2790..28751691679125.2911768-CDS-H-elongata_contig12004:2790..2875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 2791..2875 +
1622929703.9411058-CDS-H-elongata_contig12004:3177..33051622929703.9411058-CDS-H-elongata_contig12004:3177..3305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 3178..3305 +
1691679125.299731-CDS-H-elongata_contig12004:3177..33051691679125.299731-CDS-H-elongata_contig12004:3177..3305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 3178..3305 +
1622929703.9526012-CDS-H-elongata_contig12004:3617..36861622929703.9526012-CDS-H-elongata_contig12004:3617..3686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 3618..3686 +
1691679125.309817-CDS-H-elongata_contig12004:3617..36861691679125.309817-CDS-H-elongata_contig12004:3617..3686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 3618..3686 +
1622929703.9650428-CDS-H-elongata_contig12004:4018..40991622929703.9650428-CDS-H-elongata_contig12004:4018..4099Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 4019..4099 +
1691679125.3175373-CDS-H-elongata_contig12004:4018..40991691679125.3175373-CDS-H-elongata_contig12004:4018..4099Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 4019..4099 +
1622929703.9771576-CDS-H-elongata_contig12004:4452..44911622929703.9771576-CDS-H-elongata_contig12004:4452..4491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 4453..4491 +
1691679125.3258939-CDS-H-elongata_contig12004:4452..44911691679125.3258939-CDS-H-elongata_contig12004:4452..4491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 4453..4491 +
1622929704.0079086-CDS-H-elongata_contig12004:4911..49621622929704.0079086-CDS-H-elongata_contig12004:4911..4962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 4912..4962 +
1691679125.3381512-CDS-H-elongata_contig12004:4911..49621691679125.3381512-CDS-H-elongata_contig12004:4911..4962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 4912..4962 +
1622929704.0386488-CDS-H-elongata_contig12004:5220..52951622929704.0386488-CDS-H-elongata_contig12004:5220..5295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 5221..5295 +
1691679125.3606057-CDS-H-elongata_contig12004:5220..52951691679125.3606057-CDS-H-elongata_contig12004:5220..5295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 5221..5295 +
1622929704.0718198-CDS-H-elongata_contig12004:5931..60151622929704.0718198-CDS-H-elongata_contig12004:5931..6015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 5932..6015 +
1691679125.3756633-CDS-H-elongata_contig12004:5931..60151691679125.3756633-CDS-H-elongata_contig12004:5931..6015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 5932..6015 +
1622929704.0867362-CDS-H-elongata_contig12004:6212..62901622929704.0867362-CDS-H-elongata_contig12004:6212..6290Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 6213..6290 +
1691679125.385365-CDS-H-elongata_contig12004:6212..62901691679125.385365-CDS-H-elongata_contig12004:6212..6290Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 6213..6290 +
1622929704.102077-CDS-H-elongata_contig12004:6645..67271622929704.102077-CDS-H-elongata_contig12004:6645..6727Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 6646..6727 +
1691679125.4081788-CDS-H-elongata_contig12004:6645..67271691679125.4081788-CDS-H-elongata_contig12004:6645..6727Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12004 6646..6727 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12004.1549.1prot_H-elongata_contig12004.1549.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12004 2042..6727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12004.1549.1

>prot_H-elongata_contig12004.1549.1 ID=prot_H-elongata_contig12004.1549.1|Name=mRNA_H-elongata_contig12004.1549.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=331bp
CRFFFVLSRACLLRSAQCDDIEAYFGDVGSVSEIDLGSVIRVDCPANDDG
GPLEEILIASGTSLTIKSTQDFVRFVNVKFTVEEGATLVFDIPITRFGPN
SGDSEGGTGYMLDVYDDASVTFMGKFRASQIENIRSVFYNSGSIDFKGDS
LFNNNGNVFRSNSNGTLKFRGDAVFRNNSWLALDLIGSDSFVRQMFSKTA
TFDNNAGNFDGATGCAVDNSEGTVIFRDDAYFSNHRCDEGSAVYNGGTMK
FYGKVEFEGNNGQRVWGGGLRNGAGSILFKKAVQFNRNDATIGGGLVVTG
GEVTFQKAVKFESNQAAVNGGAFALLDGGT*
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mRNA from alignment at H-elongata_contig12004:2042..6727+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12004.1549.1 ID=mRNA_H-elongata_contig12004.1549.1|Name=mRNA_H-elongata_contig12004.1549.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4686bp|location=Sequence derived from alignment at H-elongata_contig12004:2042..6727+ (Himanthalia elongata Himel1 dioecious)
TGTCGCTTTTTCTTTGTCCTCTCACGTGCGTGTTTGCTCCGTAGCGCTCA
ATGCGATGACATCGAAGCGTACTTCGGTGACGTCGGTTCCGTCAGCGAGA
TCGATCTGGGTAGCGTCATCCGGGTGGACTGCCCCGCGAACGACGATGGT
GGACCTCTCGAAGAGATACTAATCGCCAGCGGCACCAGCCTCACCATCAA
GTCAACTCAGGACTTCGTTCGGTATGTCCACCACAAGAAAACTTTCCCTT
CCCCTATGCTCGTTCAGTAGCTATTAAATAGACTATAAACATAGGCTATT
ATAGGCTCTACACAGGATCGATCTACTCGTATTAAGGATTGCAGGGCAAA
CGAGAGAGACTGAGAGAATGCCGAAAATTCCCGATGGAGGTGGAAGGTTG
CCGAGAATCTAATGGGTTGGCGGGTTGGGCTATTAGTATCTAGAGGAGAC
AACTTCCACCTGGTGTGTCAGTTTGTATCGAACCATAGGCTCTATTATAC
AATAACACCTCAGGGTCACTTCAAGCGCCCCTTCTGTTTCGGCACGCCGG
TAGCTTTCGCTTTGTTGTTGAGTGTTCGACAGGGTTGGCACATTTTTGCA
ATCCGTAGTAGAGCCAGAGCCATACATCTCTCTCTATATATATATATACA
TATATATACACTTAGCCCGCAGTACATTAATATTAATATAAATTCACTCT
CCCGCGTATGTCGTTCACGTCTTGTCATTTTGCTCATTTTTTATTTTAGA
TTTGTGAACGTTAAGTTCACCGTCGAAGAAGGAGCCACGCTCGTGTTCGA
CATACCAATCACCCGTTTCGGCCCCAACAGTGGGGTGAGTCTTATGCATG
ACGTCACGATGCGCATCTCTTAAGTTACGCGGAAATTACATGTTAGCAGC
AAGAGCTAGCGCACCCTACCCATAACATCTCTAATACCCCCCTAGTGGCA
GGATGTTTTGCGTGCCAGGGATTTCCCTTTCTCTTGGAGGGGGGGATAAA
GGGGGAATATTGGATGAAGTTAAGTTTTATTGAAATAGTCTAGTTGCGCA
AGGAAGAGGTTTTTCTTGTGGTGTCTTGTAAGCCTGCTCGATTGTTTTCG
GCCCCAACCGGCCTCTTTTTCGACTCTCTGCCACAGGACTCGGAGGGTGG
GACGGGCTACATGCTCGACGTGTATGATGATGCCAGCGTGACTTTCATGG
GCAAGTTCCGTGCTAGTCAGATCGAGAACATCCGTTCCGTATTCTACAAC
AGCGGGTCGATCGAGTGAGTTGTCTCTACTAGTTAGTTACTTCGCTCTGT
CGACGCCGTATCGTGGACCCAGCATATTTTGGGGGAAAGTTTTCATAGGC
CTCATGGTCGGGTTGATAATATTTACGCTGATCATTGCTTGTCTGGCGCG
ACGTCATTCCGAATGCCTCTGCCAGCTACAGCGTGAAACGCTCCGAGGCA
TTTTAGCCAGGAGAAGCGGGTTTTAAATATTGTTCGGGTTAAATGCTTAA
GCGCGATGCCCGACACCATTCAGTAAATGTTTAAAGCCTCGCACGCGATA
ATGCCACGTGTGCCCTCGCCCGTCAGCTTCAAAGGGGACTCGCTCTTCAA
CAACAACGGAAATGTGTTTCGCAGCAATTCCAATGGCACCTTGAAGTGAG
CATCACATCGCATTGCAACGCAACGCCACCCTAGGCCGGTCTGAATGTTT
AAATCAAGTTATCTCTTTGGTTGCTGGCGCAGGGTGTTGCCATCGCAGGA
CGTTGATAGAAAATACTAATGATCGTTTTATCTTCTCTCGATAATTAAAT
GTTTTCCAGCAATGATCTGACATTTGATCTATTATTTAAATGTGGGAAGC
TATCAAACTGCAGACACACAACCCTATTCGACCAATAAGCAGCCTGTCGT
TAGCGCACGATATATCTTCGTTTATTTTGTCTCGTAATGCCCAACCTTTT
ATGCGACTCGCCGCGTTCGTGAAACAGGTTCCGAGGCGACGCCGTTTTCA
GGAATAACTCGTGGCTTGCGCTCGACCTGATTGGCTCCGACTCCTTCGTC
AGGCAAATGTTATGGATCGTTGCCTTTACATCATATCCCCCGCCCTGCAC
TGAAATCAGTTAAAAAGGGCCTCGTTGGCGGCCTTACAACACCTGGGGTA
GAAAAGATTGTCATCTGCATTCGGCTAGTGGCGCTGCTGCATCTTGACGT
GGGAATCCTGCCCCTTTGAGAATCGACACGTTTTAGCGGAGCTAAGGTTG
CCGTAGGAGCCCGGGGGGCTACAGAAGCTCGCTGATAGCGTGAGCGATGG
CATGAGCGATGAACGCTTTGACGAAGGTAAAACAAAGTGTTGTGGTGTAC
ATGCAATTTGGATGACCGTGCGTTATTGATGATTTGATGTCCCCTTCGTC
CTCACCGGCAGGTTTTCCAAGACGGCCACGTTCGATAACAACGCCGGTAA
GTTCCACTATTAAGAGTTAATAATAGGGGGATAGGGGATAGGGATAGGGA
CACCTTGATAGGAAAAGACAGTACATATAATATACGACAGGGACATCTTG
AATCGCATTTACTGATATTAACAATATTAACAGGAAGGTATGCCCATCGA
AAATAGTGTCGTGCAACATTGTTCCTGAGAATCACGCATTTCCCTTTTTC
GACACACAGCTCTAGTCGCGACGACATGGACGGTTCTCGGCTCGGTTTCT
TTCTGGTGAACTGAAAATAGGACCGATGTCCCTCGTTGGGTAATACATCC
TCTAAGTGGAAATACGACCTTGAGTCGACTGATATTTATACATATACTCT
TTAGAGCTTATCCCCCCTCCCGTTACCCTCGTTACCCTACTCTTTATCCT
TGGTACTTTCGCTCAGGTAGCTTCGACGGTGCAACAGGCTGCGCGGTGGA
CAACTCCGAGGGTACTGTTATGTACGTGGCGAAGGAGACGACCCTAGGTT
CCACCTCGCAACTTGTCGGCAACAGTATAAGCTAGAGCCGTTGGCGGCTT
TTTAAGCAACGTCGCTCGACTATCTCTGGTGTATGTCATGCGGGAGGGGC
GGGCACTCATGGCGTTCCACACGAAGGTGTTGTGGGCCTTGTGCGTGCGT
ATCCCTGTCTCCGAGCGTTTTGGTTAGGCTGTTCTACCTCCACATTCCGC
GTTGCCATGTTTTCGAATGCCCGGCGCAGCTTCCGCGACGACGCTTACTT
CTCGAACCACCGCTGTGACGAGGGCTCCGCTGTCTACAACGGGGGAACCA
TGAAGTGAGGAATAGTTTCACTCTGTACACATCCCTCATTACTGCCATCG
CTGCCACTAGGTTCACACATCCCGTTTTTTATACGTAGTGAACGCATATG
CTTTATAGAGGCGTGCAAAAAATAGTCCTTGGAATTACTTGAACAGGCAG
CACCCGCTACTCAAGCTACCTTGAGGATTGCTGACCCAGTGTCGGAGGAC
TCTCGGTGGTGAACGCCATCGGTGCGCAATTGCATGACCTGATGAACTCG
GGATTGACCCGATGGCGGTTGACGGTAGAGATGGACGTCGTGACGGAAAA
CGGGAGGATCGAGAGGATTCCCAGAGTAAGCACCATATTCAGCCTGGGTT
GGGAGAATGAACAGGCTGACGCGGGACGGGATAGGACGACCGAACCCATC
CCGCGAGACCAAAATCTCGGACATAGGAAAAAATGTTTTCCCCTGTTCAA
CTGACCACGAGCAGAACTGGCAACCATATCCGGTTGATCCATACTAAAGG
CTATATATATAGAGAGAGAGACTACACACAGGAGGTGTTCTTGGTAATTC
CTTTATTTCGTTTCTCTAAAGCCACCCGACGTCGAAATACTAACACATAC
GGTAAGTTTTAGTTTTGGCTCCGCCGGCCGTCTTTGCCAGGTTCTACGGG
AAGGTGGAATTCGAAGGCAACAACGGCCAGAGGGTTTGGGGAGGAGGGTT
GCGAAACGGAGCCGGAAGCATCCTGTAAGTTACTTGTCGACTGTATGTTT
TTGCTACATCTTCGAATAAAAACAGTAAGGTCTTTTAACTACTCAGCTGC
AGAGTAGTTAAGGGCTCGGCTATGGATTGCCACCGAATACCGTTCAACCC
TCAAGCTCCGCCACTCAACCCCCCGTGGCGTGTCTCTCTCTGCCGTTATA
TTTTTACTGACTTCCGTTTAGGTTCAAGAAGGCCGTGCAATTCAACAGGA
ACGATGCGACAATCGGTGGCGGTCTAGTGGTGACAGGCGGCGAGGTCACG
TGAGAGACGCGTAGTACCAGATATGTCCAGTATTTTTGTCACGCCGATGT
TCGTGCTTCGGACAGACACATGCCAGAGAAACTCCCCTCGCACTGTGCCA
AAAAAATGCTTTCTTCTGGGCCGGGTTTTCATCTCGGGGGTCGGAGGTAT
TTGAATTATTTGTCGCACCCGTCCAGGCGGTTACTGTCTCTCGTCGCTTA
AAACGTCGATATACCGCGACAAAGCCGTCCAGGGTATCGCGTACAGATGA
AACAGAGCTCGTCCACGAGGCAATAATTTGAAGGCAACACGCTCAATATT
GAAGTTTTATATGGATGTCGCCGTTGCCACCGCCGCCGCTCCCCTGAGCC
ACAGGTTCCAAAAGGCGGTCAAGTTTGAGAGCAACCAAGCAGCTGTAAAT
GGTGGTGCTTTCGCACTCCTCGATGGGGGCACGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig12004:2042..6727+

>mRNA_H-elongata_contig12004.1549.1 ID=mRNA_H-elongata_contig12004.1549.1|Name=mRNA_H-elongata_contig12004.1549.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1986bp|location=Sequence derived from alignment at H-elongata_contig12004:2042..6727+ (Himanthalia elongata Himel1 dioecious)
TGTCGCTTTTTCTTTGTCCTCTCACGTGCGTGTTTGCTCCGTAGCGCTCA
ATGCGATGACATCGAAGCGTACTTCGGTGACGTCGGTTCCGTCAGCGAGA
TCGATCTGGGTAGCGTCATCCGGGTGGACTGCCCCGCGAACGACGATGGT
GGACCTCTCGAAGAGATACTAATCGCCAGCGGCACCAGCCTCACCATCAA
GTCAACTCAGGACTTCGTTCGTGTCGCTTTTTCTTTGTCCTCTCACGTGC
GTGTTTGCTCCGTAGCGCTCAATGCGATGACATCGAAGCGTACTTCGGTG
ACGTCGGTTCCGTCAGCGAGATCGATCTGGGTAGCGTCATCCGGGTGGAC
TGCCCCGCGAACGACGATGGTGGACCTCTCGAAGAGATACTAATCGCCAG
CGGCACCAGCCTCACCATCAAGTCAACTCAGGACTTCGTTCGATTTGTGA
ACGTTAAGTTCACCGTCGAAGAAGGAGCCACGCTCGTGTTCGACATACCA
ATCACCCGTTTCGGCCCCAACAGTGGGATTTGTGAACGTTAAGTTCACCG
TCGAAGAAGGAGCCACGCTCGTGTTCGACATACCAATCACCCGTTTCGGC
CCCAACAGTGGGGACTCGGAGGGTGGGACGGGCTACATGCTCGACGTGTA
TGATGATGCCAGCGTGACTTTCATGGGCAAGTTCCGTGCTAGTCAGATCG
AGAACATCCGTTCCGTATTCTACAACAGCGGGTCGATCGAGACTCGGAGG
GTGGGACGGGCTACATGCTCGACGTGTATGATGATGCCAGCGTGACTTTC
ATGGGCAAGTTCCGTGCTAGTCAGATCGAGAACATCCGTTCCGTATTCTA
CAACAGCGGGTCGATCGACTTCAAAGGGGACTCGCTCTTCAACAACAACG
GAAATGTGTTTCGCAGCAATTCCAATGGCACCTTGAACTTCAAAGGGGAC
TCGCTCTTCAACAACAACGGAAATGTGTTTCGCAGCAATTCCAATGGCAC
CTTGAAGTTCCGAGGCGACGCCGTTTTCAGGAATAACTCGTGGCTTGCGC
TCGACCTGATTGGCTCCGACTCCTTCGTCAGGCAAATGTTCCGAGGCGAC
GCCGTTTTCAGGAATAACTCGTGGCTTGCGCTCGACCTGATTGGCTCCGA
CTCCTTCGTCAGGCAAATGTTTTCCAAGACGGCCACGTTCGATAACAACG
CCGGTAAGTTTTCCAAGACGGCCACGTTCGATAACAACGCCGGTAACTTC
GACGGTGCAACAGGCTGCGCGGTGGACAACTCCGAGGGTACTGTTATCTT
CGACGGTGCAACAGGCTGCGCGGTGGACAACTCCGAGGGTACTGTTATCT
TCCGCGACGACGCTTACTTCTCGAACCACCGCTGTGACGAGGGCTCCGCT
GTCTACAACGGGGGAACCATGAACTTCCGCGACGACGCTTACTTCTCGAA
CCACCGCTGTGACGAGGGCTCCGCTGTCTACAACGGGGGAACCATGAAGT
TCTACGGGAAGGTGGAATTCGAAGGCAACAACGGCCAGAGGGTTTGGGGA
GGAGGGTTGCGAAACGGAGCCGGAAGCATCCTGTTCTACGGGAAGGTGGA
ATTCGAAGGCAACAACGGCCAGAGGGTTTGGGGAGGAGGGTTGCGAAACG
GAGCCGGAAGCATCCTGTTCAAGAAGGCCGTGCAATTCAACAGGAACGAT
GCGACAATCGGTGGCGGTCTAGTGGTGACAGGCGGCGAGGTCACGTTCAA
GAAGGCCGTGCAATTCAACAGGAACGATGCGACAATCGGTGGCGGTCTAG
TGGTGACAGGCGGCGAGGTCACGTTCCAAAAGGCGGTCAAGTTTGAGAGC
AACCAAGCAGCTGTAAATGGTGGTGCTTTCGCACTCCTCGATGGGGGCAC
GTGAGTTCCAAAAGGCGGTCAAGTTTGAGAGCAACCAAGCAGCTGTAAAT
GGTGGTGCTTTCGCACTCCTCGATGGGGGCACGTGA
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