mRNA_H-elongata_contig119510.1504.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A836CJ26_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ26_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.420e-30 Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
LTGKY + + +RLN F+G+M RYRNS S AVK Y E+A +GLTPTQL+LAW Y+R F+TSTI+GAT++ QLR N+ A NCP+T+ A + I+ VY
Sbjct: 265 LTGKYQDSDSDNSKSRLNHFKGYMARYRNSMSEAAVKAYVEVAAEVGLTPTQLALAWCYTRPFVTSTIVGATSVEQLRENIMAYNCPITEQADDMIREVY 364
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A6H5KYK6_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYK6_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.110e-30 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVYDE 306
L+GKY + PDARLN+F G+ +RYR + + +YA+IA IGLTP Q++LAWVYSREFITSTI+GAT LR NLRALNCPVT+ A+E I V++E
Sbjct: 325 LSGKYLDPDVPVPDARLNKFPGYYSRYRTPECIECTARYAKIAADIGLTPAQMALAWVYSREFITSTIVGATTTESLRENLRALNCPVTEEAHEKIVAVHEE 426
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A835Z0T2_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T2_9STRA) HSP 1 Score: 114 bits (284), Expect = 6.710e-28 Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
LTGKY +RL+ F+G+M RYRNS S AVK+Y ++A GLTPTQL+LAW Y+R ++TSTI+GAT QLR N+ A NCP+T+ +AIQ VY
Sbjct: 300 LTGKYQDPNYDDSKSRLSFFKGYMGRYRNSFSEAAVKEYMQVAQEAGLTPTQLALAWCYTRPYVTSTIVGATTCDQLRDNIMAYNCPITEETTKAIQQVY 399
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A813GU69_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GU69_POLGL) HSP 1 Score: 97.8 bits (242), Expect = 1.410e-21 Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 1 LTGKY--DGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
L+GKY D +E P ARLN F+G+M RYRNSDS A ++YA +A+ +TPTQL+LAW SR F+TS+IIGAT+L QL+ NL A +++ A I VY
Sbjct: 597 LSGKYLHDDVE---PGARLNLFKGYMERYRNSDSEAATREYAALAERHNMTPTQLALAWCKSRWFVTSSIIGATSLAQLKDNLDAFEMDLSEDALADIGRVY 695
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A4D9D8L6_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8L6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.030e-21 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
L+GKY +AS +ARLNRF G+M RYR S V +Y EIA GLT QL+L WVYSR F+TSTI+GAT++ QLR NL ALN P+ + V+
Sbjct: 363 LSGKYMFKGRAS-EARLNRFPGYMARYRTLQSQDCVFEYKEIASRYGLTMAQLALGWVYSRPFVTSTIVGATSVDQLRENLDALNVPIFSNVVHDLSEVF 461
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A2V0P6G7_9CHLO (Aldo keto reductase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P6G7_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 8.030e-21 Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
LTGKY A AR N FQG+M RY S + A ++YA +A GLTPTQL+LAW SR F+TSTIIGAT++ QLR NL A ++Q + I ++Y
Sbjct: 284 LTGKYLEGGDAPATARFNLFQGYMERYYKSLARAATEEYAALAKANGLTPTQLALAWCRSRWFVTSTIIGATSVAQLRQNLEAFEVELSQEVIDGINSLY 383
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A2P6TW26_CHLSO (Aldo keto reductase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TW26_CHLSO) HSP 1 Score: 95.1 bits (235), Expect = 1.280e-20 Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 LTGKY-DGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
LTGKY +G + ARLN FQG+M RY S + +AV YAE+A GLTPTQL+LAWV+SR F+ STIIGAT + QLR ++ A N +T I+ VY
Sbjct: 288 LTGKYIEGKDIEK--ARLNLFQGYMARYNKSLAKEAVAAYAEVARQHGLTPTQLALAWVHSRWFVASTIIGATTMEQLRDDIEAFNVQLTPECLADIEQVY 386
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A7S1WPS7_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WPS7_ALECA) HSP 1 Score: 92.0 bits (227), Expect = 4.030e-20 Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVY 300
LTGKY L ARL+ F G+M RYRNSDS A K+Y +A+ GLTPTQL++AW SR F+TS+IIGAT++ QL+ N+ + V++ E I V+
Sbjct: 213 LTGKY--LSSDHEGARLSLFPGYMTRYRNSDSEAATKEYVALAEKHGLTPTQLAIAWCRSRWFVTSSIIGATSVEQLKDNIDSFTVDVSKELEEDILAVF 310
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A7S1SP45_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SP45_9CHLO) HSP 1 Score: 88.2 bits (217), Expect = 1.030e-19 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRALNCPVTQPAYEAIQNVYDE 306
L+GKY + + R N F G+M RY S + AV +Y ++A+ G+TP++L+LAW SR F+TSTIIGAT++ QL+ N+ A N +T E I V+ +
Sbjct: 79 LSGKY--INATPENCRFNLFPGYMERYNKSFAVNAVAEYVKVAEKHGMTPSELALAWCKSRWFVTSTIIGATSMPQLKENINAFNMELTPECIEDINKVFGQ 178
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Match: A0A7S2XWE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.210e-19 Identity = 42/84 (50.00%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPTQLSLAWVYSREFITSTIIGATNLTQLRANLRAL 252
L+ KY G E+++ ++RL F GFM+RY+ S + KAV YA+IA +G+TP + +LAW YSR +TS+IIGAT++ QL+ N+ AL
Sbjct: 299 LSNKYTGDEESTKNSRLTLFPGFMDRYKQSLAVKAVAAYADIAKQLGMTPAEFALAWCYSRPEVTSSIIGATSVAQLKENMGAL 382 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119510.1504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119510.1504.1 >prot_H-elongata_contig119510.1504.1 ID=prot_H-elongata_contig119510.1504.1|Name=mRNA_H-elongata_contig119510.1504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp LTGKYDGLEQASPDARLNRFQGFMNRYRNSDSAKAVKKYAEIADMIGLTPback to top mRNA from alignment at H-elongata_contig119510:1139..1821+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119510.1504.1 ID=mRNA_H-elongata_contig119510.1504.1|Name=mRNA_H-elongata_contig119510.1504.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=683bp|location=Sequence derived from alignment at H-elongata_contig119510:1139..1821+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119510:1139..1821+ >mRNA_H-elongata_contig119510.1504.1 ID=mRNA_H-elongata_contig119510.1504.1|Name=mRNA_H-elongata_contig119510.1504.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at H-elongata_contig119510:1139..1821+ (Himanthalia elongata Himel1 dioecious)back to top |