mRNA_H-elongata_contig117162.1343.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: A0A2G8KUM7_STIJA (Putative zinc finger BED domain-containing protein 4-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KUM7_STIJA) HSP 1 Score: 64.3 bits (155), Expect = 4.680e-11 Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 16 GSNPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
G NPL WW N H++ +G +A L P + PSERLFS+ G + +KRNRL PE+ E ++
Sbjct: 116 GCNPLDWWKLNYHRFPRLGKLALKYLCAPPSTVPSERLFSEAGGLYDEKRNRLRPEKAEMVL 177
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: UPI000C13F7AD (zinc finger BED domain-containing protein 4-like n=3 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C13F7AD) HSP 1 Score: 61.6 bits (148), Expect = 1.760e-9 Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 22 NPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
+P WWA +K KY+ + ++AR L+ P S SERLFS+ G + +KRNRL PER E L+
Sbjct: 530 SPFDWWAKHKSKYAHLANLARVFLSAPGSSVYSERLFSEAGNLYEEKRNRLLPERAESLV 589
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: A0A4C1SU53_EUMVA (Zinc finger BED domain-containing protein 4 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SU53_EUMVA) HSP 1 Score: 60.1 bits (144), Expect = 1.860e-9 Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 22 NPLRWWA--ANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
NP WWA NK+ + ++ +A+ L PA S SERLFS+ G+ + KRNRLAPER E ++
Sbjct: 113 NPYEWWALSTNKNGFPILSKLAKRYLITPASSVYSERLFSEAGLLYEKKRNRLAPERAEKIV 174
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: A0A4C1WFL1_EUMVA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1WFL1_EUMVA) HSP 1 Score: 60.1 bits (144), Expect = 2.310e-9 Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 22 NPLRWWA--ANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
NP WWA NK+ + ++ +A+ L PA S SERLFS+ G+ + KRNRLAPER E ++
Sbjct: 128 NPYEWWALSTNKNGFPILSKLAKRYLITPASSVYSERLFSEAGLLYEKKRNRLAPERAEKIV 189
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: UPI001E1E09A0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E09A0) HSP 1 Score: 60.8 bits (146), Expect = 3.280e-9 Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 7 IYAGSNPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
+ +G++PL WW N+ K+ I VA+ V+A+PA S PSER+FS G+ RNRL+ E ++ ++
Sbjct: 497 MVSGTDPLLWWRDNEEKFPKIAIVAKRVIAVPATSVPSERIFSATGLLINKLRNRLSSEIVDSII 561
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: A0A4C1SQH3_EUMVA (Zinc finger BED domain-containing protein 4 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SQH3_EUMVA) HSP 1 Score: 58.9 bits (141), Expect = 5.560e-9 Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 22 NPLRWWA--ANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
NP WWA NK+ + ++ +A+ L PA S SERLF++ G+ + KRNRLAPER E ++
Sbjct: 119 NPYEWWALSTNKNGFPILSKLAKRYLITPASSVYSERLFTEAGLLYEKKRNRLAPERAEKIV 180
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: UPI001FA341B7 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001FA341B7) HSP 1 Score: 59.7 bits (143), Expect = 5.660e-9 Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 7 IYAGSNPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
I +P +WW+ANK +Y ++ R L+ P S SERLFS+ G+ + +KRNRL P E L+
Sbjct: 184 IDRNQDPYKWWSANKRQYPVLSKFVRIYLSAPCSSVYSERLFSEAGLIYEEKRNRLLPVNAEKLV 248
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: UPI001955CDF1 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955CDF1) HSP 1 Score: 60.1 bits (144), Expect = 6.140e-9 Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 22 NPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHL 198
NPL+WW N+ K+ + VA+S LA PAIS PSERLFS G KR L E ++ L
Sbjct: 529 NPLQWWKENETKFPTLAVVAKSYLAAPAISTPSERLFSAAGTIVSKKRASLTKEHVDML 587
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: UPI0013B3F9AA (zinc finger BED domain-containing protein 4-like n=1 Tax=Xiphophorus helleri TaxID=8084 RepID=UPI0013B3F9AA) HSP 1 Score: 59.7 bits (143), Expect = 7.570e-9 Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 1 PSIYAGSNPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
P G++PL WW Y L+ V L I A S PSER+FS+ G ++RNR++P +L HL+
Sbjct: 257 PLFQRGADPLSWWETKALIYPLLSHVMAGRLCIVATSVPSERIFSKTGQIITERRNRISPAKLRHLV 323
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Match: UPI000C6CF883 (zinc finger BED domain-containing protein 1-like n=2 Tax=Xiphophorus TaxID=8082 RepID=UPI000C6CF883) HSP 1 Score: 59.7 bits (143), Expect = 8.360e-9 Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 1 PSIYAGSNPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFFCDKRNRLAPERLEHLM 201
P G++PL WW Y L+ V L I A S PSER+FS+ G ++RNR++P +L HL+
Sbjct: 456 PLFQRGADPLSWWETKALIYPLLSHVMAGRLCIVATSVPSERIFSKTGQIITERRNRISPAKLRHLV 522 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117162.1343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig117162.1343.1 >prot_H-elongata_contig117162.1343.1 ID=prot_H-elongata_contig117162.1343.1|Name=mRNA_H-elongata_contig117162.1343.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp PSIYAGSNPLRWWAANKHKYSLIGSVARSVLAIPAISDPSERLFSQCGMFback to top mRNA from alignment at H-elongata_contig117162:56..256+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig117162.1343.1 ID=mRNA_H-elongata_contig117162.1343.1|Name=mRNA_H-elongata_contig117162.1343.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=201bp|location=Sequence derived from alignment at H-elongata_contig117162:56..256+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig117162:56..256+ >mRNA_H-elongata_contig117162.1343.1 ID=mRNA_H-elongata_contig117162.1343.1|Name=mRNA_H-elongata_contig117162.1343.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at H-elongata_contig117162:56..256+ (Himanthalia elongata Himel1 dioecious)back to top |