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Homology
BLAST of mRNA_H-elongata_contig1127.1039.1 vs. uniprot
Match: D8LDX8_ECTSI (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX8_ECTSI) HSP 1 Score: 286 bits (731), Expect = 1.400e-84 Identity = 184/314 (58.60%), Postives = 227/314 (72.29%), Query Frame = 1
Query: 1 ASDFGESATAAATQVSDAVARFAGKYLEGCEGLRDGLVGAEAAAKAATGELAAASAHALGEVNRKCNELARSVADGAESAGNLVGATASAFEKGLQEQRDAISAWHEEVDAYLGTLRHGLETHEQDLKGLSKEVQSRGLDAEREMAAFRDACATELAEVRTWADARIAAQTEQMERQSEEARVVAARSKEETKAEVAHLMQSFSVLMSGLQANASERADKQANAAGEAWSRSISAARSLGPEVSQKMGGIADSFATGSKSVVQRVVLSSSATQNTIKEHQDAVATLTSTTVEASTRAVGGAARSSSAADAAGSS 942
A+ FGE+ATAA VS+AV+RF+G++ +GC L+ L AE AAKAA+ L+AA+A AL E + KC ELA V+ GA S +LV + A E L EQ+ AI AW E++ A L LR+GL++HE L L ++V R +A +EM F++ CA+ELAEVR+WAD RIAAQT QME QSEEA+VVAARSKEETK EVA LMQS S LMSGLQ NA+ RAD QA AAGEAWSRSISAARSLGPEVSQKMGGIA+S A GS+SV +++ LSSSAT N+IKE Q A A ++T + S GA ++S AD A SS
Sbjct: 543 AASFGETATAATKGVSEAVSRFSGEHAKGCGNLKGFLSRAEEAAKAASWGLSAAAAEALKEADLKCKELAEGVSTGAASTEDLVTLASIALEDALGEQKSAIDAWSEQMAASLEGLRNGLKSHEGGLSSLCEDVNRRSEEASKEMTDFKEKCASELAEVRSWADERIAAQTAQMELQSEEAKVVAARSKEETKVEVAQLMQSLSTLMSGLQTNAAARADSQAAAAGEAWSRSISAARSLGPEVSQKMGGIAESVANGSESVAKKLALSSSATGNSIKERQSAAAAFVASTADVSDAFAAGATQASGLADDARSS 856
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 290.0 |
| Seed ortholog evalue | 1.4e-75 |
| Seed eggNOG ortholog | 2880.D8LDX8 |
| KEGG ko | ko:K10398,ko:K14400 |
| KEGG Pathway | ko03015,map03015 |
| GOs | GO:0000226,GO:0000278,GO:0000281,GO:0000902,GO:0000910,GO:0000911,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005819,GO:0005856,GO:0005871,GO:0005874,GO:0005875,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0008150,GO:0008574,GO:0009653,GO:0009826,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0030865,GO:0031122,GO:0032502,GO:0032506,GO:0032989,GO:0032991,GO:0040007,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043622,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048589,GO:0048856,GO:0048869,GO:0051301,GO:0060560,GO:0061640,GO:0071840,GO:0071944,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:1902410,GO:1902850,GO:1903047,GO:1990939 |
| EggNOG free text desc. | ATP-dependent microtubule motor activity, plus-end-directed |
| EggNOG OGs | COG5059@1,KOG0243@2759 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03019,ko03021,ko03036,ko04812 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 1027 |
| Cds size | 1026 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929648.827317-CDS-H-elongata_contig1127:11483..11561 | 1622929648.827317-CDS-H-elongata_contig1127:11483..11561 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 11484..11561 - |
| 1691679104.8020191-CDS-H-elongata_contig1127:11483..11561 | 1691679104.8020191-CDS-H-elongata_contig1127:11483..11561 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 11484..11561 - |
| 1622929648.8611708-CDS-H-elongata_contig1127:11868..11985 | 1622929648.8611708-CDS-H-elongata_contig1127:11868..11985 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 11869..11985 - |
| 1691679104.8120937-CDS-H-elongata_contig1127:11868..11985 | 1691679104.8120937-CDS-H-elongata_contig1127:11868..11985 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 11869..11985 - |
| 1622929648.8762305-CDS-H-elongata_contig1127:12351..12456 | 1622929648.8762305-CDS-H-elongata_contig1127:12351..12456 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 12352..12456 - |
| 1691679104.820324-CDS-H-elongata_contig1127:12351..12456 | 1691679104.820324-CDS-H-elongata_contig1127:12351..12456 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 12352..12456 - |
| 1622929648.8935056-CDS-H-elongata_contig1127:12721..12844 | 1622929648.8935056-CDS-H-elongata_contig1127:12721..12844 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 12722..12844 - |
| 1691679104.8281503-CDS-H-elongata_contig1127:12721..12844 | 1691679104.8281503-CDS-H-elongata_contig1127:12721..12844 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 12722..12844 - |
| 1622929648.9245157-CDS-H-elongata_contig1127:14483..14762 | 1622929648.9245157-CDS-H-elongata_contig1127:14483..14762 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 14484..14762 - |
| 1691679104.8361392-CDS-H-elongata_contig1127:14483..14762 | 1691679104.8361392-CDS-H-elongata_contig1127:14483..14762 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 14484..14762 - |
| 1622929648.9447262-CDS-H-elongata_contig1127:15174..15315 | 1622929648.9447262-CDS-H-elongata_contig1127:15174..15315 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 15175..15315 - |
| 1691679104.8456304-CDS-H-elongata_contig1127:15174..15315 | 1691679104.8456304-CDS-H-elongata_contig1127:15174..15315 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 15175..15315 - |
| 1622929648.9741051-CDS-H-elongata_contig1127:15513..15696 | 1622929648.9741051-CDS-H-elongata_contig1127:15513..15696 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 15514..15696 - |
| 1691679104.8544612-CDS-H-elongata_contig1127:15513..15696 | 1691679104.8544612-CDS-H-elongata_contig1127:15513..15696 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1127 15514..15696 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1127.1039.1 >prot_H-elongata_contig1127.1039.1 ID=prot_H-elongata_contig1127.1039.1|Name=mRNA_H-elongata_contig1127.1039.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=342bp
ASDFGESATAAATQVSDAVARFAGKYLEGCEGLRDGLVGAEAAAKAATGE LAAASAHALGEVNRKCNELARSVADGAESAGNLVGATASAFEKGLQEQRD AISAWHEEVDAYLGTLRHGLETHEQDLKGLSKEVQSRGLDAEREMAAFRD ACATELAEVRTWADARIAAQTEQMERQSEEARVVAARSKEETKAEVAHLM QSFSVLMSGLQANASERADKQANAAGEAWSRSISAARSLGPEVSQKMGGI ADSFATGSKSVVQRVVLSSSATQNTIKEHQDAVATLTSTTVEASTRAVGG AARSSSAADAAGSSLKKNLAVVSATICNSADACARDAEALHR back to topmRNA from alignment at H-elongata_contig1127:11484..15696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig1127.1039.1 ID=mRNA_H-elongata_contig1127.1039.1|Name=mRNA_H-elongata_contig1127.1039.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4213bp|location=Sequence derived from alignment at H-elongata_contig1127:11484..15696- (Himanthalia elongata Himel1 dioecious) GCCTCGGACTTCGGGGAGAGCGCAACCGCCGCAGCCACTCAGGTGTCCGA
CGCGGTCGCTCGCTTCGCCGGCAAGTACTTGGAGGGCTGCGAGGGGCTGA
GGGACGGCCTGGTCGGAGCTGAGGCGGCGGCGAAGGCAGCCACGGGGGAG
TTAGCGGCGGCTTCGGCGCACGCGCTGGGAGAGGTACGTGGTTCTTTGTT
ATCGGTACTTGTACGTTTTTTTATAGTGCGTAAACAATCAGTTGTTTTTA
GTTCTCTATTTTGGGGTTGACAAAACCCCCCCACTGTGCTACAATGTACT
GTAATTCACTACACTGTGCTATACTGGTACTTGATACTTGATACTTGATA
CTTAATACTTCATATTTTATAATTGATACAGGTGAACCGAAAATGTAATG
AATTGGCGCGGAGTGTCGCAGACGGAGCAGAGTCTGCCGGTAACCTCGTC
GGCGCGACCGCTTCGGCCTTCGAGAAGGGTCTGCAAGAGCAGAGGGACGC
CATCAGCGCGTGGCATGAGGAGGTGAGGGTGGGAGGAGAGGTGGCGTCTG
TTTGGCGGCTCTGGACTACAGACCGTGCTTCCTGTGTAGCGATTTTGTGT
GGATAGCTAGCAGTTAGCACGAGCATGAATCCGACGATGGTTGGTCCCCT
GGATTTCACCTCTCATGGTGTAAATATAGTGTGGATGTTGGGAGGGTTGG
AATGAGTTCAGATCTGTTAATACTATTGGCCACGGCGTAGAGAGAAACAG
AGTATTGTTGTTGCTGCTGCTACTCCTACTATTGATACGACTAATAAAAA
GTCTATAGTACAGTAATATTCCTAGAACAGTATTTTTGGGGATAAATGGT
AAAAATATGTTTGTCCTCCAAAATAGCTAGCGCTGATATCCTTGCCCCCC
CCCCTCCCTACATGGTTAATCCCTCCCCCATGAGGTCGATGCATATCTGG
GTACTCTTCGTCACGGTCTTGAGACCCACGAGCAAGACTTAAAAGGGTTG
TCGAAAGAAGTGCAGAGCCGCGGGCTAGATGCCGAGAGAGAAATGGCGGC
GTTTAGAGACGCGTGCGCCACCGAGCTGGCGGAGGTACGGACCTGGGCTG
ACGCACGCATCGCGGCGCAGACAGAGCAGATGGAGCGGCAGAGCGAAGAG
GCTAGGGTTGTCGCCGCGAGATCCAAGGAGGAGACGAAGGCGGAGGTCGC
TCACTTGATGCAGGTACGGCGCGAGACGGTGTTATTTATTACATATACGC
AATACAGTGTGGTATAATACGGTGTTTTACGGTATTTATTCCGACAAAAA
GATTATGCGATGCGGTATTAGACGAAGCGACATGATATATGTACAGTACA
GTAAATACAGTATATACAATTTATAATAAATGTATACGGTATAATATAAA
GCGATACGCTATTATTATGGTTCAACACGGAAGGATATAATGCACACGGT
ATGATTCTGTATGATGTTAGACGATAGAGCATGCATGGTACGGTTTCGTA
CGTTTGCGCGAGAGCGGTAAGGGAAGGCGGCTGCGGTTGTGAAGGCGCGC
GCGCGTGACAGCAGTCCTTCGTGACGAAGTCACAACCGCGGGAGGATGAA
GAATGTCGTTCGAGGAGTGCCACACTTTTTCTTGTCTTTCAAATTTGACC
TTCAATGCCATGTCATTTTGTAAATGTTTTTTTATCCAGGGTACTTCCCA
AGCACTCTCTCTCTCTCTATATATATATGTATATATATATGCACAAAAGT
AGTATCTGTTATTAAACGTTGCCAGGTGTTAAGGATTATTACGTTCCAGC
GCAATCTTATTATTAGTAGTATATATCTCCCTCTCCTTACTATTAGTAGT
CTATATCTCCCTCTCCTTACGAACAGTAGTATATATATATCCCTCTCCTT
ACTATTAATAGTATATATATCCCTCTTAATATTGTAGGTATATATCTCCC
TCTCTTTACTAGTACTAAATTCATCGGGTCAACGCTGAAATTTCGAATGT
CCAAACATATTCAGCTTGGGTTCTAGATGGGGATTTTTTGCCCTCGATCA
GGCAACTCATAAATGTTCGAGATCAGGGTCTGAGGAGAATAATTGGGTAC
GCTAGATCTTTGTTCGACATGTTTAAGCCCCCGGCAGTTTACAATTGATT
AAAAATTTGAGACTGTTCGCAATTGAAGCTCTAGACACTTTTGTGTTCAA
GGGTGGCTCCGATTAGTGGCATGCCTGTAATCGTTTTCTATTCCGTAATT
AAAGACCACTTGGACAAGTACCAACGCGTATTACTTGTCGCGCCATTGAA
ATAACCGTATGAGCAGCTCGGACTGCATATAATCGACGATCGACCTTGAT
CATAGCGTTTCAATTAAGTTATTACCTTGTTCGAAGGCTTCGATTGAGCT
CTGATGTTTTGTTAATAAAGCGCAGCGCGGACTAGTGCAGGTATCAGGCG
TGAGTACTTAAGATATCTGTAATCTGCGCCCTGATGAATCATCTTATAGG
GCGAAAAATAATCAAGAACGATAGCTCTTCATTCTTCAAAGCATTCATCC
CCTTACTATTTATAGCATATATCTTCCTCTCCTTACTATTTGTAGTATCT
ATCTCCTTTCCCTTGTTATAAATAGTACATATTTCCATCTTACTATTATA
TCTCCCTCTTACTATTATCTCTAATGTATGGCGTTTAGGTTGACCCTGAC
TATTTGGCAATGTGTACGGCGTGATCCTCGATGTGTGTGGATCCACTCTC
GATACTTGCACCGTTAACCGCAAGCTCTTCTACGCCTCCTTGTCCGTATT
TTTGTTCGGCGTCATTGCTGACTCGTACCGTGCCGTGTCGTTCCATGCGC
AGTCCTTCTCCGTCCTCATGTCGGGGCTGCAGGCGAACGCGTCGGAGCGC
GCGGACAAGCAAGCGAACGCCGCCGGAGAGGCGTGGTCGAGGTCCATTTC
TGCGGCTCGATCGCTTGGACCAGAGGTGCGTAGTGGTCCTAAGGCAGAGG
GGGTAGGGTCCACCGATGTTGTCTCCGCGTTCCACCCATCTAGCAGCCGT
TCCCTGACTCTGCCGACGAATGACTGGAGTATCTTAGCCTCTCAGTATAG
CGTACCGGGGCTTTGATTATTTTTACTAATTATCCCTCGATCGTGTCAAT
TTATGTGTGTGTGTTTGTTTTCGAGGTTTTTCCTTCTTGTTTTTTTGTTT
TTTGCTATCTCTTAGTTCTCAACCCTCGTTTTTTTTTCAGGTTTCTCAAA
AGATGGGAGGCATCGCAGATAGCTTCGCGACTGGGAGCAAGAGCGTTGTC
CAGAGGGTGGTATTGTCTTCTAGTGCCACCCAAAACACCATCAAGGTGTG
CGAAACTGTTGTTTGAAACGCTCTACTAATTTCAAGGAAATAACCTCAAT
CGTAGAGCATGGTGCCTCTAGAGCTATATCCAAAGAAGCGTAAAGTTGTG
TTCATTCAGGGGGGGAAACCAAATATATATTTTAATTATTTCAGATTTTA
AATTATTTTATCCGTGAAAACGACTCTTTGAGCACTTGGGTCGTCACCAT
TGTAGCTGCTGTTCTGCGCGCTGCACCATCCACAAGGCAAGGATAGAGTT
ATAGCCCCAGCAGCGTCTTTCACAAAAAAGGAAACATGCAACTCAGACTG
ATTTCCCACCTCTAGACTTTGCGATTCTATTACACCCATGCCCGACGCAA
CGTCCCCTTAGGAGCACCAGGATGCGGTAGCAACCCTTACGTCGACTACC
GTGGAAGCGTCAACGAGGGCGGTGGGTGGAGCGGCCCGGTCATCCAGCGC
GGCAGATGCGGCGGGCTCTTCGCTTAAGGCAAGTCGTCTCTCTCTGCTGT
CTCTAATCGCCTCTGTATCTCTCTGTACCTGTCCATCTTTCTGGCCACTC
ATCCATTTTTAGCAGTTTGAGCTCGAATAAGATCAGCGATTACGTGCGCT
CGCGCGCGAAACTCACGAATAATGCAATTTTAAAACATTTAGTAGATATA
ATCGTTTGTCGAAAACCTCGCACGACTCCATTTTCCTCCCGTCTTCCTTA
TAACTCTGATCCTCGCTCTGTCGAGCCTCCCCTTTCCAACGCCGTACAAA
CTCACGAACGTCACGTCTTCCCTTGGCCGTCGCAGAAAAATCTCGCTGTG
GTGTCGGCGACAATATGCAACTCGGCCGACGCCTGCGCGAGAGATGCAGA
GGCGTTGCACAGA back to topCoding sequence (CDS) from alignment at H-elongata_contig1127:11484..15696- >mRNA_H-elongata_contig1127.1039.1 ID=mRNA_H-elongata_contig1127.1039.1|Name=mRNA_H-elongata_contig1127.1039.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2052bp|location=Sequence derived from alignment at H-elongata_contig1127:11484..15696- (Himanthalia elongata Himel1 dioecious) GCCTCGGACTTCGGGGAGAGCGCAACCGCCGCAGCCACTCAGGTGTCCGA CGCGGTCGCTCGCTTCGCCGGCAAGTACTTGGAGGGCTGCGAGGGGCTGA GGGACGGCCTGGTCGGAGCTGAGGCGGCGGCGAAGGCAGCCACGGGGGAG TTAGCGGCGGCTTCGGCGCACGCGCTGGGAGAGGCCTCGGACTTCGGGGA GAGCGCAACCGCCGCAGCCACTCAGGTGTCCGACGCGGTCGCTCGCTTCG CCGGCAAGTACTTGGAGGGCTGCGAGGGGCTGAGGGACGGCCTGGTCGGA GCTGAGGCGGCGGCGAAGGCAGCCACGGGGGAGTTAGCGGCGGCTTCGGC GCACGCGCTGGGAGAGGTGAACCGAAAATGTAATGAATTGGCGCGGAGTG TCGCAGACGGAGCAGAGTCTGCCGGTAACCTCGTCGGCGCGACCGCTTCG GCCTTCGAGAAGGGTCTGCAAGAGCAGAGGGACGCCATCAGCGCGTGGCA TGAGGAGGTGAACCGAAAATGTAATGAATTGGCGCGGAGTGTCGCAGACG GAGCAGAGTCTGCCGGTAACCTCGTCGGCGCGACCGCTTCGGCCTTCGAG AAGGGTCTGCAAGAGCAGAGGGACGCCATCAGCGCGTGGCATGAGGAGGT CGATGCATATCTGGGTACTCTTCGTCACGGTCTTGAGACCCACGAGCAAG ACTTAAAAGGGTTGTCGAAAGAAGTGCAGAGCCGCGGGCTAGATGCCGAG AGAGAAATGGCGGCGTTTAGAGACGCGTGCGCCACCGAGCTGGCGGAGGT ACGGACCTGGGCTGACGCACGCATCGCGGCGCAGACAGAGCAGATGGAGC GGCAGAGCGAAGAGGCTAGGGTTGTCGCCGCGAGATCCAAGGAGGAGACG AAGGCGGAGGTCGCTCACTTGATGCAGGTCGATGCATATCTGGGTACTCT TCGTCACGGTCTTGAGACCCACGAGCAAGACTTAAAAGGGTTGTCGAAAG AAGTGCAGAGCCGCGGGCTAGATGCCGAGAGAGAAATGGCGGCGTTTAGA GACGCGTGCGCCACCGAGCTGGCGGAGGTACGGACCTGGGCTGACGCACG CATCGCGGCGCAGACAGAGCAGATGGAGCGGCAGAGCGAAGAGGCTAGGG TTGTCGCCGCGAGATCCAAGGAGGAGACGAAGGCGGAGGTCGCTCACTTG ATGCAGTCCTTCTCCGTCCTCATGTCGGGGCTGCAGGCGAACGCGTCGGA GCGCGCGGACAAGCAAGCGAACGCCGCCGGAGAGGCGTGGTCGAGGTCCA TTTCTGCGGCTCGATCGCTTGGACCAGAGTCCTTCTCCGTCCTCATGTCG GGGCTGCAGGCGAACGCGTCGGAGCGCGCGGACAAGCAAGCGAACGCCGC CGGAGAGGCGTGGTCGAGGTCCATTTCTGCGGCTCGATCGCTTGGACCAG AGGTTTCTCAAAAGATGGGAGGCATCGCAGATAGCTTCGCGACTGGGAGC AAGAGCGTTGTCCAGAGGGTGGTATTGTCTTCTAGTGCCACCCAAAACAC CATCAAGGTTTCTCAAAAGATGGGAGGCATCGCAGATAGCTTCGCGACTG GGAGCAAGAGCGTTGTCCAGAGGGTGGTATTGTCTTCTAGTGCCACCCAA AACACCATCAAGGAGCACCAGGATGCGGTAGCAACCCTTACGTCGACTAC CGTGGAAGCGTCAACGAGGGCGGTGGGTGGAGCGGCCCGGTCATCCAGCG CGGCAGATGCGGCGGGCTCTTCGCTTAAGGAGCACCAGGATGCGGTAGCA ACCCTTACGTCGACTACCGTGGAAGCGTCAACGAGGGCGGTGGGTGGAGC GGCCCGGTCATCCAGCGCGGCAGATGCGGCGGGCTCTTCGCTTAAGAAAA ATCTCGCTGTGGTGTCGGCGACAATATGCAACTCGGCCGACGCCTGCGCG AGAGATGCAGAGGCGTTGCACAGAAAAAATCTCGCTGTGGTGTCGGCGAC AATATGCAACTCGGCCGACGCCTGCGCGAGAGATGCAGAGGCGTTGCACA GA back to top
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