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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2366 |
| Cds size | 2109 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929638.5440962-UTR-H-elongata_contig11152:97..160 | 1622929638.5440962-UTR-H-elongata_contig11152:97..160 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig11152 98..160 - |
| 1691679101.1888402-UTR-H-elongata_contig11152:97..160 | 1691679101.1888402-UTR-H-elongata_contig11152:97..160 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig11152 98..160 - |
| 1622929638.6290553-UTR-H-elongata_contig11152:3607..3801 | 1622929638.6290553-UTR-H-elongata_contig11152:3607..3801 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig11152 3608..3801 - |
| 1691679101.2433863-UTR-H-elongata_contig11152:3607..3801 | 1691679101.2433863-UTR-H-elongata_contig11152:3607..3801 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig11152 3608..3801 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929638.5621912-CDS-H-elongata_contig11152:160..759 | 1622929638.5621912-CDS-H-elongata_contig11152:160..759 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 161..759 - |
| 1691679101.1970685-CDS-H-elongata_contig11152:160..759 | 1691679101.1970685-CDS-H-elongata_contig11152:160..759 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 161..759 - |
| 1622929638.5785038-CDS-H-elongata_contig11152:1386..1626 | 1622929638.5785038-CDS-H-elongata_contig11152:1386..1626 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 1387..1626 - |
| 1691679101.2073538-CDS-H-elongata_contig11152:1386..1626 | 1691679101.2073538-CDS-H-elongata_contig11152:1386..1626 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 1387..1626 - |
| 1622929638.5949848-CDS-H-elongata_contig11152:2256..3490 | 1622929638.5949848-CDS-H-elongata_contig11152:2256..3490 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 2257..3490 - |
| 1691679101.2188542-CDS-H-elongata_contig11152:2256..3490 | 1691679101.2188542-CDS-H-elongata_contig11152:2256..3490 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 2257..3490 - |
| 1622929638.613816-CDS-H-elongata_contig11152:3571..3607 | 1622929638.613816-CDS-H-elongata_contig11152:3571..3607 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 3572..3607 - |
| 1691679101.2273476-CDS-H-elongata_contig11152:3571..3607 | 1691679101.2273476-CDS-H-elongata_contig11152:3571..3607 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig11152 3572..3607 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11152.941.1 >prot_H-elongata_contig11152.941.1 ID=prot_H-elongata_contig11152.941.1|Name=mRNA_H-elongata_contig11152.941.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=703bp
MTSEVPISEAPTAPIAETRAIEDMAPDATSVEAPPTETSTPQTPTAETPT TEAREPEAPVTTEFPHTDTPSVEVPATDTLAPEAPPAETLTSEAPEPEVP STEAPTTEASATEAPAADVPSIEATLPETAFAEALTAEDSVTEATFSETL ALDATPTEALPCETPASEAQVTGTPVRETPLAEMPISEAPATADPSCETP LAEMPTSDAPTAEALPAEVTTREAPTAEAPAPESQTAEITAPETPTPETT PAGAQTAEVQAAEALAPQAPPTVTPTTSREISATEATTFETPATKAPPAE TPATDDSTTEAPPPGVSAASILAPETPATQEPPVETLVTETPLLNVPPIE ALVTETTAPEAPATEVPATEAPSTEAPTEDPPAAEDGKEEPEENPAPEVQ VELEAEIEVSRAAPEEGVDVATIGPLEGLTAAAADGGNANVGPLKVPEAL VPDFVEADKESKAGDGASSAEAAEMDVSVLAVETVACEGEGEEAEDLGNE GDAAPDSFPAPRSAPVPIATPAEGSEEPVAEEVCSMIVSEQRGIVTPAED PAVAAGAAAGESAAETGPVAIKPDEAVTTRNGVVSPAVPVALQPAEPGDM DDSEQQQNNDEKNEASAVVEPAEEEEDEVSAGAGAGAGSPEVGEAAAEES SPPKALSPAAEGVPDRDRSGAYLTPGSVVVCLGVLSVCLSLGVFFSHAAR SS* back to topmRNA from alignment at H-elongata_contig11152:98..3801- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig11152.941.1 ID=mRNA_H-elongata_contig11152.941.1|Name=mRNA_H-elongata_contig11152.941.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3704bp|location=Sequence derived from alignment at H-elongata_contig11152:98..3801- (Himanthalia elongata Himel1 dioecious) CGACCGAAGAGACTCATGTTACTAACGCTACAGCATCCGAGGCCTCGTCT
CCCAAGGCTTCGGCACATAACGCTCCGGCGACCGAGGTCCCGCCCGCCGA
GGCTCTGGTAACAACTCCCCCGGAAGCCGAGGATGTGGCCACAGAGGCGC
TGGCACGCGAGGCTCCGGTGCCCGATACCCCGCTTGCCGAGGCTATGACC
TCCGAGGTTCCAATATCCGAGGCTCCGACCGCTGATACGCCAACCTCCGA
GGCCCCAACCGCCGAGGCTCCTTTCACTGAAGCTCTGGCACCCGACACCC
TACGAACTGAGGCTCCAATTGCCGAGACTCGGGCAATCGAGGATATGGCG
CCCGATGCCACGTCTGTGGAGGCTCCGCCCACCGAAACTTCCACCCCTCA
GACTCCGACCGCCGAGACTCCGACTACCGAGGCTCGTGAACCCGAGGCTC
CGGTCACCACCGAGTTTCCGCACACCGATACTCCGTCCGTCGAAGTTCCG
GCTACCGATACTCTGGCGCCCGAGGCACCGCCCGCCGAGACTCTCACCTC
AGAGGCTCCGGAACCCGAGGTTCCATCCACCGAAGCTCCGACTACTGAGG
CTTCGGCCACCGAGGCTCCGGCAGCCGATGTTCCGTCTATTGAGGCTACG
TTACCCGAGACTGCGTTCGCCGAGGCCCTTACTGCCGAGGATTCAGTCAC
CGAGGCAACATTTTCCGAGACTCTGGCGCTCGATGCCACGCCTACCGAGG
CTTTGCCCTGTGAGACTCCGGCCTCCGAGGCTCAGGTCACAGGGACACCG
GTACGCGAAACTCCACTCGCTGAGATGCCGATCTCCGAGGCTCCGGCCAC
AGCGGATCCGTCATGCGAGACTCCGCTCGCTGAGATGCCGACCTCCGATG
CCCCGACAGCCGAGGCTCTACCCGCAGAGGTTACGACCAGGGAGGCTCCG
ACCGCCGAGGCTCCGGCTCCTGAATCTCAGACCGCTGAAATTACAGCCCC
CGAGACTCCAACGCCCGAAACTACGCCCGCCGGGGCTCAAACCGCCGAGG
TTCAGGCTGCTGAGGCTCTGGCACCCCAGGCCCCGCCCACCGTGACTCCG
ACTACATCGAGGGAGATTTCGGCCACTGAAGCTACGACATTCGAGACACC
GGCCACCAAGGCACCTCCTGCCGAGACTCCGGCCACAGACGATTCAACCA
CCGAGGCCCCGCCACCCGGGGTTTCAGCGGCGAGTATTTTGGCCCCTGAA
ACTCCGGCTACACAGGAACCTCCAGTCGAAACTCTAGTCACAGAGACGCC
ATTGCTCAACGTCCCGCCCATCGAGGCTCTGGTCACAGAAACGACGGCAC
CCGAGGCTCCGGCCACCGAGGTCCCAGCCACTGAGGCCCCGTCTACTGAG
GCTCCCACCGAGGATCCTCCGGCCGCGGAAGATGGTAAGGAAGAGCCCGA
GGAAAATCCTGCCCCGGAGGTTCAGGTAGAGTTGGAGGCTGAGATTGAAG
TATCGAGAGCAGCTCCGGAGGAGGGCGTGGACGTTGCCACAATTGGTGAG
ATATTTTTCTTAATTTTTTTTTTGGGAGGGGCGAGGGATCGCTTTGTAGA
GACCAATTTCGCGTACACTCTGGGGGTAGGTGCACGCGTTGCATGGGTCA
AGGTCTCTCTGTATCGCACATATTTCAAGCACGTTTTGTTTAAACAGTAG
CGTTTGTGTCACGATAGTTGCGCAAGAGAAGGGCGAATACAGCGCTTTCT
TATAAAAACAATTTGGGCGCCCTTTTCCGGTTCATCCTGGAAATATATAA
AGCTGCCACCTTGAGCTAAGAGCAAATAACTGTGTTTCCACAACATTATG
TCGTAATTACCGGACAGCACCGGCTAGTCCTACCTCATCATGACTGTTGT
GCCCCCTCGCGTGTGCTGACGTAACGGGTTCAAGAGCCGCGCGCACCATT
TCCTCCTTGTCTGGTAACTACAGGATACTAGTCCTACGTCGGACGAAATA
AACTTACATTTCGTCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCGGGGGCGCACCCACCAACCCCCCCACCCCCCCCCCCGCCCCCTGCAGG
CCCCCCCACAGCCNNNNNNNNNNCCCACGCGCCTCGCTCGTGGTATCATA
ATCGAACCCAACGAACACCTCCCAGGGCCTTTGGAAGGCCTAACGGCAGC
CGCAGCCGACGGTGGAAACGCTAATGTTGGACCATTGAAGGTTCCCGAGG
CGCTTGTACCGGATTTCGTGGAAGCAGATAAAGAATCGAAAGCGGGAGAT
GGCGCGTCTTCGGCTGAGGCCGCTGAGATGGACGTCTCCGTCCTTGCGGT
GGAGACGGTGGCGTGTGAGGGTGAGGGTGAGGAGGCGGAGGATCTCGGAA
ATGAAGGGGATGCCGGTGAGCGCGCTAAGAAAATAACCGTTTCCGTTCCG
GCGGGAAACCGCTTCGGCCTCTTGAGCGAGCGATCCACTTTTTCCCCCTC
TCAAGCTTGGATGGAATTAGGATGATCGCTACCCATCAAGAGTGTGCGCC
GTGGAACGTTTACAACATGATAACTGCGTCTGGGTGGGGATAGTATCTTA
AAAAAATATATGCACGTCATCCTGGCGATTTCGCCGCTAAGTGGTGGCAG
TAATGGGTTATTTTTCGTTCACGACGAAAATAATTTTGTAAGTTGGAAAA
ATGCCTATGTATATTTTTATTTTCAGCCGTAAACAAATCGAGACTTGCGA
AATACAATGCGGAGGGCTGCCCTACCTGAACAGCGTAAGTGTGGCCGTTC
TATAGGTGCAGCAACGTTTTGTTTTGTTTTGTGAAGACCCCAAAAAACTC
GAGAATATGCTTCATGAAATGACGTGGGGTAAAGGGGAGTGTCACGTGGC
GTAAAGGGGTGCTGCATCCTTTCTTGTCTTCGAGATACAGCCTGACCTTG
ATAAAGAGTTACCAACCCCCATATCCCCTGGACTGCATCCCACTCTGGAA
CTACCTCCCAACCCTCATGTGCTCTCTTCTCTCTCTCCCCAGCGCCCGAC
TCCTTCCCCGCCCCAAGGTCTGCTCCCGTTCCTATCGCCACCCCTGCCGA
GGGCTCGGAGGAGCCAGTCGCGGAAGAAGTTTGCAGCATGATCGTATCGG
AGCAGCGCGGCATCGTGACGCCGGCGGAGGATCCCGCTGTTGCCGCGGGG
GCCGCTGCGGGTGAATCTGCGGCGGAGACCGGACCCGTGGCCATCAAGCC
TGACGAGGCTGTCACCACGCGGAACGGAGTGGTTTCTCCCGCGGTTCCTG
TTGCGCTACAGCCGGCCGAGCCTGGAGACATGGACGACAGCGAGCAGCAG
CAAAATAATGACGAAAAGAACGAGGCTTCGGCGGTGGTTGAGCCGGCCGA
GGAGGAGGAGGACGAGGTTTCGGCCGGCGCCGGTGCCGGTGCCGGTTCTC
CCGAGGTCGGCGAGGCCGCGGCGGAGGAAAGCTCGCCTCCCAAGGCGTTG
TCGCCGGCGGCCGAAGGTGTGCCTGATCGCGATCGGTCGGGGGCTTACCT
TACCCCCGGATCCGTGGTGGTCTGTCTCGGCGTTCTCTCTGTGTGCCTGT
CGCTGGGTGTATTTTTTTCACACGCCGCGCGCTCGTCCTAGCTACACCAT
GTCCTTGTTGTGCTTATTGTTGTGCTCCTCTTTGAAGTTTTTTTTTTAAT
GTTC back to topCoding sequence (CDS) from alignment at H-elongata_contig11152:98..3801- >mRNA_H-elongata_contig11152.941.1 ID=mRNA_H-elongata_contig11152.941.1|Name=mRNA_H-elongata_contig11152.941.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4218bp|location=Sequence derived from alignment at H-elongata_contig11152:98..3801- (Himanthalia elongata Himel1 dioecious) ATGACCTCCGAGGTTCCAATATCCGAGGCTCCGACCATGACCTCCGAGGT TCCAATATCCGAGGCTCCGACCGCTCCAATTGCCGAGACTCGGGCAATCG AGGATATGGCGCCCGATGCCACGTCTGTGGAGGCTCCGCCCACCGAAACT TCCACCCCTCAGACTCCGACCGCCGAGACTCCGACTACCGAGGCTCGTGA ACCCGAGGCTCCGGTCACCACCGAGTTTCCGCACACCGATACTCCGTCCG TCGAAGTTCCGGCTACCGATACTCTGGCGCCCGAGGCACCGCCCGCCGAG ACTCTCACCTCAGAGGCTCCGGAACCCGAGGTTCCATCCACCGAAGCTCC GACTACTGAGGCTTCGGCCACCGAGGCTCCGGCAGCCGATGTTCCGTCTA TTGAGGCTACGTTACCCGAGACTGCGTTCGCCGAGGCCCTTACTGCCGAG GATTCAGTCACCGAGGCAACATTTTCCGAGACTCTGGCGCTCGATGCCAC GCCTACCGAGGCTTTGCCCTGTGAGACTCCGGCCTCCGAGGCTCAGGTCA CAGGGACACCGGTACGCGAAACTCCACTCGCTGAGATGCCGATCTCCGAG GCTCCGGCCACAGCGGATCCGTCATGCGAGACTCCGCTCGCTGAGATGCC GACCTCCGATGCCCCGACAGCCGAGGCTCTACCCGCAGAGGTTACGACCA GGGAGGCTCCGACCGCCGAGGCTCCGGCTCCTGAATCTCAGACCGCTGAA ATTACAGCCCCCGAGACTCCAACGCCCGAAACTACGCCCGCCGGGGCTCA AACCGCCGAGGTTCAGGCTGCTGAGGCTCTGGCACCCCAGGCCCCGCCCA CCGTGACTCCGACTACATCGAGGGAGATTTCGGCCACTGAAGCTACGACA TTCGAGACACCGGCCACCAAGGCACCTCCTGCCGAGACTCCGGCCACAGA CGATTCAACCACCGAGGCCCCGCCACCCGGGGTTTCAGCGGCGAGTATTT TGGCCCCTGAAACTCCGGCTACACAGGAACCTCCAGTCGAAACTCTAGTC ACAGAGACGCCATTGCTCAACGTCCCGCCCATCGAGGCTCTGGTCACAGA AACGACGGCACCCGAGGCTCCGGCCACCGAGGTCCCAGCCACTGAGGCCC CGTCTACTGAGGCTCCCACCGAGGATCCTCCGGCCGCGGAAGATGGTAAG GAAGAGCCCGAGGAAAATCCTGCCCCGGAGGTTCAGGTAGAGTTGGAGGC TGAGATTGAAGTATCGAGAGCAGCTCCGGAGGAGGGCGTGGACGTTGCCA CAATTGGCTCCAATTGCCGAGACTCGGGCAATCGAGGATATGGCGCCCGA TGCCACGTCTGTGGAGGCTCCGCCCACCGAAACTTCCACCCCTCAGACTC CGACCGCCGAGACTCCGACTACCGAGGCTCGTGAACCCGAGGCTCCGGTC ACCACCGAGTTTCCGCACACCGATACTCCGTCCGTCGAAGTTCCGGCTAC CGATACTCTGGCGCCCGAGGCACCGCCCGCCGAGACTCTCACCTCAGAGG CTCCGGAACCCGAGGTTCCATCCACCGAAGCTCCGACTACTGAGGCTTCG GCCACCGAGGCTCCGGCAGCCGATGTTCCGTCTATTGAGGCTACGTTACC CGAGACTGCGTTCGCCGAGGCCCTTACTGCCGAGGATTCAGTCACCGAGG CAACATTTTCCGAGACTCTGGCGCTCGATGCCACGCCTACCGAGGCTTTG CCCTGTGAGACTCCGGCCTCCGAGGCTCAGGTCACAGGGACACCGGTACG CGAAACTCCACTCGCTGAGATGCCGATCTCCGAGGCTCCGGCCACAGCGG ATCCGTCATGCGAGACTCCGCTCGCTGAGATGCCGACCTCCGATGCCCCG ACAGCCGAGGCTCTACCCGCAGAGGTTACGACCAGGGAGGCTCCGACCGC CGAGGCTCCGGCTCCTGAATCTCAGACCGCTGAAATTACAGCCCCCGAGA CTCCAACGCCCGAAACTACGCCCGCCGGGGCTCAAACCGCCGAGGTTCAG GCTGCTGAGGCTCTGGCACCCCAGGCCCCGCCCACCGTGACTCCGACTAC ATCGAGGGAGATTTCGGCCACTGAAGCTACGACATTCGAGACACCGGCCA CCAAGGCACCTCCTGCCGAGACTCCGGCCACAGACGATTCAACCACCGAG GCCCCGCCACCCGGGGTTTCAGCGGCGAGTATTTTGGCCCCTGAAACTCC GGCTACACAGGAACCTCCAGTCGAAACTCTAGTCACAGAGACGCCATTGC TCAACGTCCCGCCCATCGAGGCTCTGGTCACAGAAACGACGGCACCCGAG GCTCCGGCCACCGAGGTCCCAGCCACTGAGGCCCCGTCTACTGAGGCTCC CACCGAGGATCCTCCGGCCGCGGAAGATGGTAAGGAAGAGCCCGAGGAAA ATCCTGCCCCGGAGGTTCAGGTAGAGTTGGAGGCTGAGATTGAAGTATCG AGAGCAGCTCCGGAGGAGGGCGTGGACGTTGCCACAATTGGGCCTTTGGA AGGCCTAACGGCAGCCGCAGCCGACGGTGGAAACGCTAATGTTGGACCAT TGAAGGTTCCCGAGGCGCTTGTACCGGATTTCGTGGAAGCAGATAAAGAA TCGAAAGCGGGAGATGGCGCGTCTTCGGCTGAGGCCGCTGAGATGGACGT CTCCGTCCTTGCGGTGGAGACGGTGGCGTGTGAGGGTGAGGGTGAGGAGG CGGAGGATCTCGGAAATGAAGGGGATGCCGGGCCTTTGGAAGGCCTAACG GCAGCCGCAGCCGACGGTGGAAACGCTAATGTTGGACCATTGAAGGTTCC CGAGGCGCTTGTACCGGATTTCGTGGAAGCAGATAAAGAATCGAAAGCGG GAGATGGCGCGTCTTCGGCTGAGGCCGCTGAGATGGACGTCTCCGTCCTT GCGGTGGAGACGGTGGCGTGTGAGGGTGAGGGTGAGGAGGCGGAGGATCT CGGAAATGAAGGGGATGCCGCGCCCGACTCCTTCCCCGCCCCAAGGTCTG CTCCCGTTCCTATCGCCACCCCTGCCGAGGGCTCGGAGGAGCCAGTCGCG GAAGAAGTTTGCAGCATGATCGTATCGGAGCAGCGCGGCATCGTGACGCC GGCGGAGGATCCCGCTGTTGCCGCGGGGGCCGCTGCGGGTGAATCTGCGG CGGAGACCGGACCCGTGGCCATCAAGCCTGACGAGGCTGTCACCACGCGG AACGGAGTGGTTTCTCCCGCGGTTCCTGTTGCGCTACAGCCGGCCGAGCC TGGAGACATGGACGACAGCGAGCAGCAGCAAAATAATGACGAAAAGAACG AGGCTTCGGCGGTGGTTGAGCCGGCCGAGGAGGAGGAGGACGAGGTTTCG GCCGGCGCCGGTGCCGGTGCCGGTTCTCCCGAGGTCGGCGAGGCCGCGGC GGAGGAAAGCTCGCCTCCCAAGGCGTTGTCGCCGGCGGCCGAAGGTGTGC CTGATCGCGATCGGTCGGGGGCTTACCTTACCCCCGGATCCGTGGTGGTC TGTCTCGGCGTTCTCTCTGTGTGCCTGTCGCTGGGTGTATTTTTTTCACA CGCCGCGCGCTCGTCCTAGCGCCCGACTCCTTCCCCGCCCCAAGGTCTGC TCCCGTTCCTATCGCCACCCCTGCCGAGGGCTCGGAGGAGCCAGTCGCGG AAGAAGTTTGCAGCATGATCGTATCGGAGCAGCGCGGCATCGTGACGCCG GCGGAGGATCCCGCTGTTGCCGCGGGGGCCGCTGCGGGTGAATCTGCGGC GGAGACCGGACCCGTGGCCATCAAGCCTGACGAGGCTGTCACCACGCGGA ACGGAGTGGTTTCTCCCGCGGTTCCTGTTGCGCTACAGCCGGCCGAGCCT GGAGACATGGACGACAGCGAGCAGCAGCAAAATAATGACGAAAAGAACGA GGCTTCGGCGGTGGTTGAGCCGGCCGAGGAGGAGGAGGACGAGGTTTCGG CCGGCGCCGGTGCCGGTGCCGGTTCTCCCGAGGTCGGCGAGGCCGCGGCG GAGGAAAGCTCGCCTCCCAAGGCGTTGTCGCCGGCGGCCGAAGGTGTGCC TGATCGCGATCGGTCGGGGGCTTACCTTACCCCCGGATCCGTGGTGGTCT GTCTCGGCGTTCTCTCTGTGTGCCTGTCGCTGGGTGTATTTTTTTCACAC GCCGCGCGCTCGTCCTAG back to top
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