mRNA_H-elongata_contig10971.782.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: D7FQQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQQ8_ECTSI) HSP 1 Score: 237 bits (605), Expect = 8.100e-76 Identity = 123/198 (62.12%), Postives = 145/198 (73.23%), Query Frame = 1
Query: 10 PTQQYDEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGS------KLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTKVREPGDPCSAD--KRAVHVAEIVSTVITPTREAFVKALA 579
PT+ YD+ IP+I+ TIE+G ++NIR PV LDVCSDPSTWPRP+ G + + WDA+V NMIHI+P+ CT GLL GAAAGLK GGHLFIYGPFALNGLL P+SNK+F SL ARSGG WGIRDA V LA + GLELT MTLMPANNFFVV KVRE +AD R VAE+V+ V+ P REA V ++
Sbjct: 67 PTE-YDQTRIPDILATIEEGKHSNIRPPVVLDVCSDPSTWPRPAGGETAEGASRRQWDAIVCSNMIHISPQECTGGLLGGAAAGLKVGGHLFIYGPFALNGLLIPDSNKNFDTSLKARSGGSWGIRDAAWVCGLAHDQGLELTAMTLMPANNFFVVFKKVREVAAAAAADVEDRKARVAELVAAVVMPAREALVTKVS 263
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A1I4RB41_9HYPH (Uncharacterized protein n=2 Tax=Methylobacterium TaxID=407 RepID=A0A1I4RB41_9HYPH) HSP 1 Score: 111 bits (277), Expect = 4.710e-27 Identity = 65/161 (40.37%), Postives = 85/161 (52.80%), Query Frame = 1
Query: 25 DEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTKVREPGDPCSADKR 507
DE IV G +N+RSP+A+D P WP + DA+V+INMIHIA TTGL+AGA A L GG L++YGPF ++G SN +F + L ++ WG+RD VA AD GL LT MPANN ++ K+ P R
Sbjct: 60 DEAARRSIVAHTRAAGLSNLRSPLAIDATRQP--WPVAKA------DAIVAINMIHIAAWEATTGLMAGAGATLPAGGILYLYGPFRVDGAHTAPSNAAFDDGLRTKNAS-WGVRDIEAVAAAADTHGLHLTERIPMPANNLSLIFRKLDRPSSDVGGASR 211
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A509EBE2_9HYPH (Uncharacterized protein n=1 Tax=Methylobacterium symbioticum TaxID=2584084 RepID=A0A509EBE2_9HYPH) HSP 1 Score: 110 bits (276), Expect = 6.640e-27 Identity = 66/148 (44.59%), Postives = 82/148 (55.41%), Query Frame = 1
Query: 25 DEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTK 468
DE IV D G N+R+P+ +D P WP + DAVV+INMIHIA TTGL+AGA A L +GG L +YGPF +G +SN +F ESL AR+ WG+RD VA AD GL L MPANN ++ K
Sbjct: 60 DEAARRSIVAHARDAGLPNLRAPLTIDASRQP--WPVARA------DAVVAINMIHIAGWDATTGLMAGAGATLSEGGLLCLYGPFREHGAHTAQSNAAFDESLRARNAS-WGVRDVEAVAATADAHGLHLAERVAMPANNLSLIFRK 198
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A2U9TUN4_9HYPH (SAM-dependent methyltransferase n=5 Tax=Methylobacterium TaxID=407 RepID=A0A2U9TUN4_9HYPH) HSP 1 Score: 109 bits (273), Expect = 1.860e-26 Identity = 67/155 (43.23%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 25 DEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTKVREPGDP 489
DE I G NIRSP+A+D P WP + DA+V+INMIHIAP TTGL+AGA A L GG L++YGPF NG SN +F +SL AR+ WG+RD VA A GL L MPANN ++ K + P
Sbjct: 60 DEAARRSIGAHARASGLANIRSPLAIDAARPP--WPVARA------DALVAINMIHIAPWDATTGLMAGAGATLPAGGVLYLYGPFRENGAHTAPSNTAFDDSLRARNAS-WGVRDIEAVAAAAGAQGLHLIERVAMPANNLSLIFRKTGQSPAP 205
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A6L2Q5J7_COPFO (Uncharacterized protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q5J7_COPFO) HSP 1 Score: 110 bits (274), Expect = 2.750e-26 Identity = 61/148 (41.22%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 25 DEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTK 468
D + I I+D +NI+ PV +DV + + W G + D +++IN+IHI+P CT L A LK+GG LFIYGP+A +G + PESN F+ SLL QWG+RD +A LA AG+ L +PANN F+V K
Sbjct: 95 DASSLRSISAYIQDAEVSNIKQPVFIDVTEEHTKWGGGGIIGKQSVDFILNINLIHISPFICTERLFHNAGQVLKRGGLLFIYGPYAFHGKISPESNVRFN-SLLQSQDPQWGLRDIDQLATLAASAGMHLLEGVPLPANNHFLVWKK 241
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A0A1WW24_ZEUCU (UPF0585 protein CG18661 n=3 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WW24_ZEUCU) HSP 1 Score: 109 bits (272), Expect = 2.820e-26 Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 19 QYDEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTK 468
++D P I +D NI P+ +D+ ++P W + S +D +++ NM+HI+P +C GL A LK G LF YGP+ +NG+LEPESN +F +SL R+ +WGIRD + +LA+E +EL MP NN F+ K
Sbjct: 65 EFDRRLFPSIKAYADDCNTNNILEPLYVDISANPKEWTKQYGFKSGTFDYMLNFNMLHISPWSCAIGLFRSAGYLLKPSGKLFTYGPYKVNGILEPESNVNFDQSLKNRNI-EWGIRDIEDLKKLAEENNIELVKSVDMPVNNKFLTWMK 213
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A5C8TU24_9HYPH (DUF938 domain-containing protein n=2 Tax=unclassified Methylobacterium TaxID=2615210 RepID=A0A5C8TU24_9HYPH) HSP 1 Score: 108 bits (270), Expect = 5.190e-26 Identity = 66/153 (43.14%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 25 DEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTKVREPG 483
DE IV G +N+RSP+ALD P WP + DA+V+INMIHIAP T GL+AGA A L GG L++YGPF N SN +F ESL R+ WG+RD VA AD G L+ MPANN ++ K+ P
Sbjct: 60 DEAARRSIVAHAFASGLSNLRSPMALDAARQP--WPIAKA------DAIVAINMIHIAPWDATIGLMAGAGATLPAGGILYLYGPFRENDAHTAPSNAAFDESLRMRNPS-WGVRDIEAVAAAADRHGFRLSERVAMPANNLSLIFRKLDCPS 203
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A3B0JZJ1_DROGU (Blast:UPF0585 protein CG18661 n=2 Tax=Drosophila guanche TaxID=7266 RepID=A0A3B0JZJ1_DROGU) HSP 1 Score: 108 bits (269), Expect = 7.130e-26 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 40 PEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTKV 471
P I D NIR+P+ +D+ DP W P S +D + + NM+HI+P AC+ GL A LK+GG +F YGP+A +G+L+P+SN F SL R+ WG+RD + LA E GL L MP+NN F+ K+
Sbjct: 70 PSIAAYAADCATGNIRAPLHVDITRDPGQWEVPPQNAS--YDYIFNSNMMHISPWACSVGLFRAAGLLLKQGGKMFTYGPYAQDGVLQPQSNVDFDRSLRQRNAS-WGVRDIKDLKVLATEHGLRLEKQVDMPSNNKFLTWLKL 210
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: UPI000407A78C (DUF938 domain-containing protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI000407A78C) HSP 1 Score: 107 bits (266), Expect = 1.640e-25 Identity = 67/148 (45.27%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 25 DEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTK 468
DEG I + D G N+R PVALD + P WP + DAVV INMIHIAP A T GL+AGAA L GG L +YGP+A G SN +F L AR+ WG+RD V A AGL+ + MPANN VV +
Sbjct: 63 DEGARASIAARVADSGLANLRPPVALDATAAP--WPVERA------DAVVCINMIHIAPWAATLGLMAGAARILPPGGPLVLYGPYARGGRHTAPSNAAFDADLRARNPA-WGVRDLDDVTAAAAAAGLDPADVVEMPANNLTVVFRR 201
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Match: A0A6A0H850_HYAAZ (UPF0585 protein C16orf13 homolog n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H850_HYAAZ) HSP 1 Score: 107 bits (266), Expect = 2.360e-25 Identity = 61/155 (39.35%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 10 PTQQYDEGCIPEIVTTIEDGG-YTNIRSPVALDVCSDPSTWPR-PSSGGSKLWDAVVSINMIHIAPKACTTGLLAGAAAGLKKGGHLFIYGPFALNGLLEPESNKSFHESLLARSGGQWGIRDAVMVAELADEAGLELTTMTLMPANNFFVVLTK 468
PT+ +D+ +P I T D + N+ P+ +D+ DP WPR P SG S +D ++ +NMIHI+P +CT GL A L+ GG L YGP++++G++EPESN F ++L ++ WG+RD ++ + A + GL M MPANN +V K
Sbjct: 66 PTE-FDKRYLPSIATYASDHTTFNNVLPPLHVDITKDPDEWPRGPLSGSS--YDLLLCVNMIHISPYSCTEGLFRAAGKVLRPGGLLVTYGPYSVDGVIEPESNVRFDQNLRSQDPS-WGLRDTQVLKQEALKNGLLYCRMFDMPANNKTLVFRK 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10971.782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10971.782.1 >prot_H-elongata_contig10971.782.1 ID=prot_H-elongata_contig10971.782.1|Name=mRNA_H-elongata_contig10971.782.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp MACPTQQYDEGCIPEIVTTIEDGGYTNIRSPVALDVCSDPSTWPRPSSGGback to top mRNA from alignment at H-elongata_contig10971:7511..8785- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10971.782.1 ID=mRNA_H-elongata_contig10971.782.1|Name=mRNA_H-elongata_contig10971.782.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1275bp|location=Sequence derived from alignment at H-elongata_contig10971:7511..8785- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10971:7511..8785- >mRNA_H-elongata_contig10971.782.1 ID=mRNA_H-elongata_contig10971.782.1|Name=mRNA_H-elongata_contig10971.782.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1176bp|location=Sequence derived from alignment at H-elongata_contig10971:7511..8785- (Himanthalia elongata Himel1 dioecious)back to top |