mRNA_H-elongata_contig10693.570.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 937 bits (2423), Expect = 0.000e+0 Identity = 513/986 (52.03%), Postives = 650/986 (65.92%), Query Frame = 1
Query: 295 AIWNHAQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGIT-VQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAGPEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPY--DWRNDGRNDPPKSLLHRIVYKSNGNPRGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQIL-SVDERGVLEQVVETAEEYKGI---TVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGETEITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEEEFELRVEALMKELKDDVNAL---------------STRVGSD----LTRALTCIQQQQERLTTQVAQGQEGMKDLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQFAISVTLDTLALIPAATL 3174
A W+H+ DV L + A S + L LA LS L L + N W+EPPE VV G+ AV +YF D++AEGI V R +KV+L+GQEGAGKTSLRQS+ PTPT+GPEESTVQ+DVE++ ++GV+LR+YDCAGQVAYTGLLQMFL+PRAVSLLVCD GAFG+R+ + D+ QL D+ KL+ELRV DW+RSLSFRIPDS+ V+VATKCDL GM AD A R+ W+ W M V V+ GV+LTSC +T GGA TR+S E + + DW + + SLLHR++Y + G RG S+VLPRSWNI L VL AL +GR DPV S +Q +L S +G E V + +G+ T +L TKW DVV AL DGV ++N DHAL+GAL IR+H+GSL+RHE Y+FLDVTWLA ILKPLLNH D E P G VSLG+T ITL E++ I SW +LK HG+LEP LA +WP LS+YVLPTL+ LGLT+PL+ D A+GLVVLLRLDE+RP++VG+ELD FRR HTA LSV+WKIF GVPPGA+EK LT CCR+G ++ FWR+GVL+QG LGGG KTFA+LIEYS + E+D+ VYG+I T APWAAL++G+SVF+ MC +FPGLRWRASLKCPQHE + M I+R ATR GDK + CN C ETGGLG AA +LEMVD+R+S+ +L++ +N R + Q R+P + C R + E L +A + +K+D++ + + V SD L R +T +QQQ R V + + L D I AD+GV G++D +V M+M R +G + PR+ACVLPPW F + L+ +EQAP W KR W++ F GKG+FK KMRLFLVCA THRLVP GP GQGYDIQ R W R +V+V F + V TLA I AA L
Sbjct: 167 AFWDHSTDVSPDEELLQGNLAGSSLPKQLEAL-----------LATLSQLG----LHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLA-AGMAADAAARMAGGAGNWIESWSDAQMTAVRVEDGVNLTSCF---ASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGR------------DPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQD-MQISRTATRRGDKLLHGATCNLCDSETGGLGAAAIDLLEMVDIRRSRGDLVRAVNRRLVKAQGRYPVL---CLGATRALHPELAHRLS-DAWWEGVKEDISGILRGARGPSDGEAVASTASVASDEMARLERLVTDLQQQVGRQHQDVREQIGAVDTRLVDMIDADDGVMGRLDFLVVMMMAMRRDGFETPRRACVLPPWNFAQGHGLSAKEQAPERWVKRLGQWREDDFKQGKGVFKKKMRLFLVCAATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIAAAPL 1116
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 937 bits (2421), Expect = 0.000e+0 Identity = 501/939 (53.35%), Postives = 640/939 (68.16%), Query Frame = 1
Query: 427 AWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGIT-VQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAGPEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSNGNPRGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQIL-SVDERGVLEQVVETAEEYKGI---TVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGETEITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEE---EFELRVEALMKELKDDVNALSTRVGSD---------------LTRALTCIQQQQERLTTQVAQGQEGMKDLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQFAISVTLDTLALIPAATL 3174
A L+ LS G L + N W+EPPE VV G+ AV +YF D++AEGI V R +KVVL+GQEGAGKTSLRQS+ PTPT+G EESTVQ+DVE++ ++GV+LR+YDCAGQVAYTGLLQMFL+PRAVSLLVCD+GAFG+R+ + QL D+ KL+ELRV DW+RSLSFRIPDS+ V+VATKCDL GM D AGR+E AI +WL W GM V V+ GVSLTSC P +G A K+++ D + A DWR + SLLHR++Y S GN RG S+VLPRSWNIAL VL AL +GR +PV S +Q +L S +G E V + +G+ T +L TKW +VV AL DGV V+ DHAL+GAL IR+H+GSL+RHE Y+FLDVTWLA ILKPLLNH D E P G VSLG+T ITL E++ I SW +LK HG+LEP+LAR +WP LS+YVLP L+ LGLT+PL+ D A+GLVVLLRLDE+RP++VG+ELD FRR HTA LSV+WK+F GVPPGA+EK LT CCR+G ++ FWR+GVL+QG LGGG +TFA+++EYS + E+D+ VYG+I T APWAAL+ G+SVF+ MC +FPGLRWRA+LKCPQHE + M I++ ATR GDK + C+ C +TGGLG AA +LE+VDV + D++ Q + R + Q R+P +RP + ARG+ E+ F+ + + +E+ D + +G + L R + +QQQ + V + + L D I AD+GV G++D +V M+M R EG D PR+ACVLPPW F + L++EEQAP W KR W++ F GKG+FKTKMRLFLVCA THRLVP GP GQGYDIQ R W R +V+V F + V TLA I AA L
Sbjct: 233 ALLATLSRLGFL-VHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLA-AGMGTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWA-CDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGR------------NPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQD-MQISKAATRPGDKSLFGATCSLCDSKTGGLGAAAMSLLEIVDVHECVDKIFQEVAGRLVQAQDRYPVLRP---EAARGLHPEQAQRRFDAWWDGVKEEMGDMLRGARGPIGGEAAGSTASVASAEVARLERLVNDLQQQVGQQHQDVRERIGAVDTRLVDMIDADDGVMGRLDFLVVMMMAMRREGFDTPRRACVLPPWDFAQGHGLSDEEQAPDCWVKRLGQWREDDFKQGKGVFKTKMRLFLVCAATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIAAAPL 1152
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE) HSP 1 Score: 845 bits (2182), Expect = 3.980e-285 Identity = 485/988 (49.09%), Postives = 627/988 (63.46%), Query Frame = 1
Query: 289 ISAIWNHAQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAGPEESTVQLDVEEIILD-GVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATAT-EGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSNGNPRGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVD-ERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINAD------HALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGETEITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRP-RCHDFARGIRDEEEFELRVEALMKELKDDVNAL---------STRVG-----SDLTRALTCIQQQQERLTTQVAQGQEGMK----DLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQFAISVTLDTLALIPAA 3168
+SA W+H+ DV LQ+ A S + LD L L R L L GN W+EPPE VV+ GM A S YF D++ EG++V+R +KVVL+GQEGAGKTSLRQSI +R PTPT+GP ESTVQ+DVEEI +D GVSLRIYDCAGQVAYTGLLQMFL+PRAV+LLVC+ AFGER P L D+ KL+ELRV W+RSLSFRIPDS+ V VATKCD GM +A R+E AIR+WL EW + M V V+ GVSLTSC+P+A +G A G +K DS + DWR D +P SLLHR++Y S G+ RG ++VLPRSWNIALVVL AL NGRQ RR R+ + RG ++ A +G + + + RR E ++ +GAL+ ++GSL+RHE Y+FLDVTWLA ILKPLLNH + E F GS+SLG+T ITL +D +SWQ+ K+ G+L+P LA +WP L DYVL TLE LGL L+ A GLVVLLRL +ERP +VG+ELD FRR H A SV WKI GVPPGAVEK LT CC +G ++ FWR+GVL+QG +GG GKTFAML+EYS + +EIDI VYGNI T APWAAL+ G+S R+MC FPGLRW ASLKCP+H+ + MPI+ ATR GDK + + C CS ETGG+G AA +L+MVDV Q++D++ + ++ RF + Q ++P +RP + +F + E+ R E + ++++ L ST+ G S ++ + + Q L Q+ Q Q+ ++ ++LE + AD G + + +VAMLM R EG+D PRQACVLP W F + L+E EQ P +W KR +W++ F GKG+F K RLFL+CAHTHRLVP GPKGQGYDIQ+ R W R +++ FA+ V TLA + AA
Sbjct: 300 LSAFWDHSSDVARDEELQQGCSAGGS------------IPKQLDGLLTLFRKLERN-LSLEGNPWKEPPEAVVKTGMAAASAYFADLFEEGVSVRRNMIKVVLVGQEGAGKTSLRQSIRSRKPTPTSGPAESTVQIDVEEIEMDDGVSLRIYDCAGQVAYTGLLQMFLSPRAVTLLVCNTEAFGERGGYPAGGNPLNEDLYKLQELRVCSWLRSLSFRIPDSDVVAVATKCDRA-AGMAVVMAERMELAIRKWLREWSRSQMTAVRVEDGVSLTSCVPSAPQERDGIALGKRKSPEDS---MWACDWRQDTPGEPLPSLLHRVIYNSKGHIRGAALVLPRSWNIALVVLDALGNGRQGS-------RRFGARDGRRGGRATGTRRGDCREIDPAARWNRGYNMGRPIREMER-----RRSSSEGRRSNSHEPRPRLGRGALNQAQYEGSLVRHETYVFLDVTWLAKILKPLLNHREDED-FFGSLSLGDTGITLDGHKDKVSWQRFKQTGVLKPELAGLLWPGDLCDYVLRTLESLGLAHQLDDRFAGGLVVLLRLGKERPASVGKELDDFRRDHEAIFSVTWKISMGVPPGAVEKVLTRCCSIGELRTFWRFGVLVQGNMGGVTAGKTFAMLVEYSHKGSEIDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHKQD-MPISNTATRPGDKLLLEHGCTLCSSETGGVGAAATELLQMVDVLQNRDKMFREVHGRFVDLQRQYPVLRPEKSREF-----NSEQARRRFETWLTGMREEAAGLLRGGGDVGESTKAGERGDISGVSDDVAKLPQLVGHLQHQLEQNQKDVRGWLGEVLEAIVDADAGAMKQREFLVAMLMKVRSEGIDTPRQACVLPEWNFAQSHGLSEHEQTPEVWVKRLHEWREDDFKQGKGVFWKKKRLFLLCAHTHRLVPCGPKGQGYDIQQLRTWARKSISATAFALQVVCSTLAAMAAA 1251
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 667 bits (1722), Expect = 4.140e-220 Identity = 372/746 (49.87%), Postives = 480/746 (64.34%), Query Frame = 1
Query: 289 ISAIWNHAQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSNGNP-RGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVDERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERF 2511
ISA+W+H Q+VQD Q+ G S M + R+LD L R K+ L GN W EPPE++V+ G +++ YF D+YAE ++R KVVL+GQEGAGK+SLRQS+ A PTPT EESTV DVE + L+G S+R+YDCAGQVAYTGLLQMFLTPR+V +LVC+ AFG++ +++ ++ D +KLEELRV DW+RS+S R+P ++ ++V TKCDL G A+I RVE A R WL W + GM V ++ GVS TSC PA G G + S + A DW + + PP SLLHR+V K +G RG MVLPRSW+ L+VL +LE GR DPV V ++ L D E Y+GITV +L KW +V L R G+ V NA +AL+GALSIR+ GSL+RHE ++FLDV WLA ILKPLLNH D E+ FDG V+LG+T ITL + I SW +LK G+LEP LA AMWP LS+YVLPTL LGLTFPLEGD +G VVLLRL ERPD+VG +D+F HT ALS W IF GVPPGA+EK LT CC +GA+Q FWRYGVL+ GGLG G FA+++EYS + +++ ++G+I T APW AL++ +S +M +DFPGLRW +LKCPQH D AM + + T+ G+ F++ RC RCS ET GLG AA +L MVD+R + E+ + ERF
Sbjct: 60 ISALWDHTQNVQDED--QDKGGCGMSGGSM-----PGQLCRLLDVL-------ERAKIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLER-KNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAG-GNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVG---TENHGSKGDWA-CDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGR------------DPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQET-FDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGD-AMLMANKVTQAGETFLK-RRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERF 770
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 662 bits (1707), Expect = 2.560e-215 Identity = 410/950 (43.16%), Postives = 542/950 (57.05%), Query Frame = 1
Query: 295 AIWNHAQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSNGNP-RGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVDERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLG---GGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEEEFELRVEALMKELKDDVNALSTRVGSDLTRALTCIQQQQERLTTQVAQGQEGMKDLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQ 3120
A+W+H QDVQD + G S M ++ R+LD L + SR +GL GN W EPPE+VV G +++ YF D+YAE + R+ VKVVL+GQEGAGKTSLRQS+ A +PT EESTV +VE + LDG S+R+YDCAGQVAYTGLLQMFLTPR+V +LVC+ G FG+R + D +KLEELRV DW+RS+S R+PD++ ++VATKCDLV G +I R+E + R WL W + GM V ++ V LTSC P G + DWRN + P S LHR+V K +G RG MVLPRSW++AL VL ALE+GR DPV V ++ D RG + A+ Y+GITV EL TKW + V L R G+ V N +AL+GALSIR+ GSL+RHEK++FLDV WL+ ILKPLLNH D + FDG V LG+T ITL ++ DI SW +LK G+LEP LA AMWP LS+YVLPTL +GLTFPLEGD GLVVLLRL+ RP++VG +D+F HT A S W+IF GVPPGA+EK LT CC +G +Q FWRYGVL+ GGLG G GI FA+++EYS + E+ ++G+I T APW AL++ +S +M +DFPGLRW+ LKCPQH +E MP + R GDKF+ + +C RCS ET GLG AA ++ +VD+R +D + + + RF ++++ C + DE L+++++D A+ G RL T + QE + L + A N + PR V K D N +A WK+ + +GM K M L +C VP GP G+GY + R W++ V+Q
Sbjct: 323 ALWDHTQDVQDIDPKER--GDSMSGGTM-----PSQLCRLLDVL---DPVPSR-YVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVG-GNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVWKGGW----ACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGR------------DPVEVVLRKSPEPD-RGDETETGGKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRT-FDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGI---FAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNE-MPFANKVNRAGDKFL-ERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQYFS----CPTGSSKTEDE---------LLRKIEDMAIAMKVMTG---------------RLDTVLESTQESLMRLKN--LQAPNYLY--------------------PRLVVV------KKDGNGGRSSRATG--------WKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQ 1173
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 655 bits (1689), Expect = 1.240e-214 Identity = 400/958 (41.75%), Postives = 539/958 (56.26%), Query Frame = 1
Query: 283 NNISAIWNH---AQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELA-PYDWRNDGRNDPPKSLLHRIVYKSNGNP-RGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVDERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEEEFELRVEALMKELKDDVNALSTRVGSDLTRALTCIQQQQERLTTQVAQGQEGMKDLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQFAI 3129
N ++A+W+H AQ V++G P ++ R+LD L D ++ G LGL N W EPP ++V G ++ YF D+Y E VQR VK++L+GQEGAGKTSLRQS+ A PT EESTV DVE + L+G +R+YDCAGQVAYTGLLQMFLTPR+V +LVC+ AFG++ Q+ D +KLEELRV DW+RS+S R+P+++ ++VATKCDLV G + R+E+A R WL W GM V ++ GV LTSC +A G +K T + +E DWR+D + PP L+HR+V K +G+ RG MVLPRSW+IAL VL ALE GR DPV V + + D Y+GITV L KW + V L R GV V NA +AL+GALSIR+ GSL+RHE ++FLDV WLA ILKPLLNH D E+ FDG V+LG+T +TL + DI SW +LK G+LEP LAR MWP LS YVLPTL LGLTFPL+ D A GLVVLLRL+ +RP+ VG+ +D+F T A S WKIF GVP GA+EK LT CC +G +Q FWR GVL+ GGLG + FA+++EYS + E+ ++G+I T APW AL++ +S R+M LDFPGLR R SLKCPQH D AM + + T+ G K + C +CS +T GLG AA ++ MVD+R +D + + + +RF E ++++ A DE+ ++E + + LKD ++ L R+G + L Q+ RL A + + + IA+ G K + +L RG G T+E M L +C VP G G+GY + AR+W++ V+Q A+
Sbjct: 151 NELTALWDHTQNAQHVEEGGNRTLGGQLP------------SQLCRLLDVL----DRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDT-GGQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVG-GNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENG-----EKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGR------------DPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEET-FDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGD-AMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYS-----FSSSAASSNDEDVLIQKMEEVARTLKDGLDDLKGRLG----KVLDSTQESLMRLKNLQAANYPYPRLVAVEEIAS-GGTPSKAHGINRVLNKLRGVG---------------------TKE-----------------------------MVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAV 1011
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 650 bits (1676), Expect = 1.680e-211 Identity = 395/952 (41.49%), Postives = 531/952 (55.78%), Query Frame = 1
Query: 292 SAIWNHAQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELA-PYDWRNDGRNDPPK-SLLHRIVYKSNGNP-RGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVDERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEEEFELRVEALMKELKDDVNALSTRVGSDLTRALTCIQQQQERLTTQVAQGQEGMKDLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQFA 3126
+A+WNH +V+D H A S + + R +LD DL+ L N W EPPE++V G + + YF D+YAE VQR+ VK++L+GQEGAGKTSLR+S+ A+ TPT EESTV DVE + L+G S+R+YDCAGQVAYTGLLQMFLTPRAV ++VC+ +FG++ Q+ D +KLEELRV DW+RS+S R+PD++ ++VATKCD V G +I R+E A R WL W + GM V ++ GV LTSC +G ++ TR+ E DWR DG++D P SLLHR+V K +G RG MV+PRSW+IAL VL ALE GR DPV V + + D Y GIT +L TKW + L + V NAD+AL+GAL+IR+ GSL+RHE ++FLDV WLA ILKPLLNH D E+ FDG V+LG+T +TL + DI SW +LK G+LEP LAR +WP LS+YV+PT+ LGLTFPLE D A GLVVLLRL+ +RP+ VG+ +D+F T AL WKIF GVP GA+EK LT CC +G +Q FWR GVL+ GG+G FA+++EYS + E+ ++G+I T APW AL++ +S +M LDFPGLR R SLKCPQH D AMP+ TR GDK + RC +CS +T GLG AA ++ MVD+R +D + + + RF + + ++ DE ++E + + LKD + L R L++ L Q+ RL T A + + + IA+ G + M +L RG G T+E M L +C VP G G GY + R+W++ V+Q A
Sbjct: 250 TALWNHTLNVEDA----RHEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLN------LDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVG-GNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDG-----ERSTRNQAMEGGWTCDWR-DGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGR------------DPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEET-FDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGD-AMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYS-----FSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGR----LSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIAS-GGTLTRARGMKRVLSKLRGVG---------------------TKE-----------------------------MTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVA 1110
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 650 bits (1677), Expect = 8.940e-211 Identity = 372/779 (47.75%), Postives = 487/779 (62.52%), Query Frame = 1
Query: 292 SAIWNHAQDVQD---GTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNA-QLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSN-GNPRGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVD-ERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEEEFEL 2598
SA+W+H Q+VQD R PG P + ++C LL + L+D L LS N W EPPE++V G +++ YF D+YAE ++R VKVVL+GQEGAGKTSLRQS+ A T T E STV DVE + L+G S+R+YDCAGQVAYTGLLQMFLTPR+V +LVC+ G FGE+ + DN Q+ D +KLE LRV +W+RS+S R+PD+E ++VATKCDL G +I R+E+A R+WL W M V ++ GV LTSC P G + ++ DWR+ G +P SL++R+V K + G RG MVLPRSW+IAL L +LE+GR DPV V + S D +RG E T Y+GITV EL KW + V L R G+ V NA++AL+GALSIR+ GSL+ HEK++FLDV WLA ILKPLLNH D E FDG V+LG+T ITL + DI SW +LKK G+LEP LA A+WP LS+YVLPTL LGL FPLE D A+GLVVLLRL RP++VG+ +D+F T A WKIF GVPPGA+EK LT CC +G +Q FWRYGVL+ GGLG +TFA+++EYS + E+ ++G++ T PW A ++ +S +M +DFPGL W+ L+CPQH D M +ATR GDKF+ RC +CS +TGGLG AA +L VD+R +D + + RF + ++++ P HD R +EE EL
Sbjct: 250 SALWDHTQNVQDVDHKERGHSMPGGPMPS-QLCRLLDIFDSVEAQG----LNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGS--DNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAG-GNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLSK----SCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGR------------DPVEMVI--LKSPDSDRGATETAKTTV--YQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEM-FDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGD-GMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCP-THD-----RSKEESEL 992
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 645 bits (1663), Expect = 1.810e-209 Identity = 363/798 (45.49%), Postives = 489/798 (61.28%), Query Frame = 1
Query: 289 ISAIWNHAQDVQDGTRLQEHPGAPFSAWRMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNAQLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSNGNP-RGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVDERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLGGGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARG--IRDEEEFELRVEALMKELKDDVNALSTRVG 2661
++A+W+H +QD + E S R+ ++ R+LD L D + G L L N W EPPE++V G +++ YF D+YAE V+R+ VKV+L+GQEGAGKTSLRQS+ TPT EESTV DVE + L+G S+R+YDCAGQ AYTGLLQMFLTPR+V +LVC+ AFG++ A Q+ D +KLEELRV +W+RS++ R+PD++A++VATKCDLV G A++ R+E+A R WL W + GM V ++ GV LTSC P G G A DWR +D LLHR+V K +G RG +VLPRSW+IAL VL ALE+GR DPV V ++ +V E A Y+GITV +L+ KW + V L R + V +A +AL+GALSIR+ GSL+RHE ++FLDV WLA ILKPLLNH D ES FDG V+LG+T +TL + DI+SW +LK G++EP LA A+WP LS++VLPTL LGLTFPLE D A+GLVVLLR + P++VG+ +D+F H A S WKIF GVPPGA+EK LT CC +G ++ FWR V + GG G G + FA+++EYS N E+ ++G+I T PW AL++ +S +M DFPGLR R SLKCPQH D AM + + R GDKF+ RC +CS +T GLG AA ++ MVD+R +DE+ + ERF + + R+ P I+ + + V E+K + N + +G
Sbjct: 179 LTALWDHTHYLQD--IVHEEGAHGMSGGRI-----PSQLCRLLDVL----DRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQR-ANDTGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVG-GNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTVEGGW----VCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGR------------DPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEES-FDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGD-AMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLG 945
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 634 bits (1634), Expect = 9.410e-208 Identity = 406/958 (42.38%), Postives = 535/958 (55.85%), Query Frame = 1
Query: 292 SAIWNHAQDVQDGTRLQEHPGAPFSAW--RMCYLLYVARFTRILDWLAWLSDLSSRGKLGLSGNQWEEPPENVVEDGMQAVSDYFFDVYAEGITVQRTDVKVVLIGQEGAGKTSLRQSISARTPTPTAG-PEESTVQLDVEEIILDGVSLRIYDCAGQVAYTGLLQMFLTPRAVSLLVCDVGAFGERNSAPRDNA-QLFHDVQKLEELRVWDWMRSLSFRIPDSEAVIVATKCDLVPVGMTADIAGRVERAIRQWLVEWRKIGMADVCVDKGVSLTSCLPAATATEGRAGGAKKQTRDSTNELAPYDWRNDGRNDPPKSLLHRIVYKSN-GNPRGGSMVLPRSWNIALVVLSALENGRQYRPPPTFHFRRDPVASVRQQILSVD-ERGVLEQVVETAEEYKGITVPELLTKWADVVGALRRDGVEVINADHALKGALSIRDHQGSLIRHEKYIFLDVTWLAAILKPLLNHMDMESPFDGSVSLGET---EITLTEEEDILSWQKLKKHGILEPALARAMWPARLSDYVLPTLEWLGLTFPLEGDSADGLVVLLRLDEERPDNVGRELDSFRRSHTAALSVQWKIFQGVPPGAVEKALTLCCRVGAIQIFWRYGVLIQGGLG---GGGIGKTFAMLIEYSRENTEIDIMVYGNIETLAPWAALAHGLSVFRMMCLDFPGLRWRASLKCPQHEDEAMPITREATRYGDKFVRDMRCNRCSVETGGLGQAAKGILEMVDVRQSKDELLQGMNERFKEWQARHPKVRPRCHDFARGIRDEEEFELRVEALMKELKDDVNALSTRVGSDLTRALTCIQQQQERLTTQVAQGQEGMKDLLEDFIAADNGVAGKVDLMVAMLMTQRGEGVDCPRQACVLPPWAFKHDNNLTEEEQAPSMWKKRFQDWKQRGFNDGKGMFKTKMRLFLVCAHTHRLVPSGPKGQGYDIQRARKWLRTTVAVMQFAI 3129
+A+W+H Q+VQD + P A ++C LL V LD L+ ++ L L GN W EPPE++V G +++ YF D+YAE ++R+ VKVVL+GQEGAGKTSLRQS+ A TPT EESTV DVE + L+G S+R+YDCAGQVAYTGLLQMFLTPR+V +LVC+ G FG++ + DN Q+ D +KL+ LRV DW+RS+S R+P ++ ++VATKCDLV G + R+E A R WL W + GM V ++ VSLTSC P G + D++ + DWR+ + SLL+R+V K + G RG MVLPRSW+IAL VL ALE+GR DPV V + S D ER E V Y+ I V EL T W + V L + G+ V NA++AL+GALSIR+ GSL+RHEK++FLDV WLA ILKPLLNH D + FDG V+LG+T ITL + DI SW +LK G+LEP LA AMWP LS+YVLPTL LGLTFPLEGD +GLVVLLRL+ RP +VG +D+F +T A S W+IF GVPPGA+EK LT CC +G +Q FWRYGVL+ GGLG G GI FA++ EYS N E+ ++G+I T APW AL++ S +M +DFPGLRW SLKCPQH E MP + GDKF+ + RC RCS +T GLG AA ++ MVD+R + + + + RF ++++ C A DE+EF ++ D+V A RL + QE + A L + PR V H + + + K R G+ K MRL +C VP G G+GY Q R W++ +Q +
Sbjct: 39 AALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVV------LDRLSGVN-------LALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGS--DNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVS-GNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGS----DASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGR------------DPVEMVL--LKSPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRT-FDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGI---FAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYE-MPFATKVNCAGDKFL-ERRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQYFT----CP--AGSSTDEDEFVRKM--------DEVKAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESL----------------------ARLKNLQAPNYHYPRLVVVKE--VGSHGTSSKAHGKKSMLSKLR-------------GLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTV 905 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10693.570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10693.570.1 >prot_H-elongata_contig10693.570.1 ID=prot_H-elongata_contig10693.570.1|Name=mRNA_H-elongata_contig10693.570.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1058bp IPGPIPKEIGRLNALKVLQLDDNKLSGPIPTELGNLGALETLSLNWNQLIback to top mRNA from alignment at H-elongata_contig10693:445..8661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10693.570.1 ID=mRNA_H-elongata_contig10693.570.1|Name=mRNA_H-elongata_contig10693.570.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8217bp|location=Sequence derived from alignment at H-elongata_contig10693:445..8661- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10693:445..8661- >mRNA_H-elongata_contig10693.570.1 ID=mRNA_H-elongata_contig10693.570.1|Name=mRNA_H-elongata_contig10693.570.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6348bp|location=Sequence derived from alignment at H-elongata_contig10693:445..8661- (Himanthalia elongata Himel1 dioecious)back to top |