mRNA_H-elongata_contig106124.494.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: D7FRS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS9_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 8.390e-22 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 61 ATNTSSVDFVVYLQGGP-ACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYLMDAEASDGGGLYFGGRPYLE 366
ATN SS D++ +LQ G +CAH+ TLC +E GA +T+ + I G+ LLS DA ENAL+ST+N+VYVP+CT DM+L+D + SD G L F GR LE
Sbjct: 2 ATNASSSDYIFFLQAGSVSCAHDATLCERQIE----GAEIITTGSEREVILGHNLLSGDAAENALFSTFNRVYVPHCTADMFLLDTQ-SDDGQLQFRGRALLE 99
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: D7G376_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G376_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 4.520e-17 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 19 TAVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALY 255
+AVCADGS G ++ ATNTSS D+V+++QGG ACA+++ LC E L+ TS G PD + +G+LSDD EEN LY
Sbjct: 55 SAVCADGSPGVFYMATNTSSTDYVMFIQGGGACAYDEELCDEYLDDRPQA---FTSTGLPDAMNAHGVLSDDPEENPLY 130
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: D1LX95_SACKO (Notum protein n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=D1LX95_SACKO) HSP 1 Score: 65.5 bits (158), Expect = 6.090e-10 Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 19 TAVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYLMDAEASDGGGLYFG 348
T C DGS Y+ + S ++++L+GG C + + C E R ++S + AG GLLS D EEN + NKV++PYC+ D++ A A GG + G
Sbjct: 77 TVTCNDGSPAGYYLYPSNGSTRWLIFLEGGWYCFDDDS-CQSRWESMR---GLMSSTRWTPEKAGSGLLSPDPEENPNWWNANKVFIPYCSSDVWSGTARADQGGYAFMG 182
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: UPI0010FC76B1 (pectin acetylesterase 5-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FC76B1) HSP 1 Score: 65.1 bits (157), Expect = 8.230e-10 Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 22 AVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYL 306
A+C DGS ++ + N S +VV LQ G +C + CL +R+ SF +S + D + G + SDD EN ++ ++NKV+VPYC+ D+++
Sbjct: 83 ALCLDGSEAVFYLSRNPHSKHWVVQLQAGGSCGTYDS-CL-----HRSRGSFGSSRNYSDYLTGTFVASDDPGENPMFHSWNKVFVPYCSGDVFV 171
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: A0A3M6T851_POCDA (Uncharacterized protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6T851_POCDA) HSP 1 Score: 64.7 bits (156), Expect = 1.130e-9 Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 22 AVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYL 306
A+C DGS ++ + N+ S +VV LQ G +C ++ CL +R+ +S + D + G + SDD +EN ++S++NKV+VPYC+ D+++
Sbjct: 83 ALCLDGSEAVFYLSRNSDSKYWVVQLQEGGSCGTYES-CL-----HRSRGPLGSSRNYSDYLTGTFVASDDPQENPMFSSWNKVFVPYCSGDVFV 171
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: UPI001955A0DC (inactive palmitoleoyl-protein carboxylesterase notum1b n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955A0DC) HSP 1 Score: 62.4 bits (150), Expect = 7.220e-9 Identity = 36/113 (31.86%), Postives = 57/113 (50.44%), Query Frame = 1
Query: 28 CADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYLMDAEASDGGGLYFGGRPYLE 366
C DGS Y+ + S ++++L+GG C QT C E R F++S +P T G G+LS EEN + N+V+VPYC+ D++ + +D F G ++
Sbjct: 82 CNDGSPAGYYIKESRGSRRWLMFLEGGWYCFSKQT-CDSRYENMRR---FMSSSKWPSTRTGTGILSPQPEENPHWWNANRVFVPYCSSDVWSGSSPKTDQSDYVFMGSQIIQ 190
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: UPI00106A3271 (pectin acetylesterase 8-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A3271) HSP 1 Score: 62.0 bits (149), Expect = 9.830e-9 Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 1
Query: 22 AVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYLMDAEASDGG 333
A C D S ++ + NT + ++V+ LQ G +C L E ++ T +F +SD D I G L S+D E N + +NKV++PYC+ D+++ +A D G
Sbjct: 61 ATCLDDSDAAFYISRNTKNHNWVIRLQAGGSCV----LFSECYDRKTT--AFGSSDYLEDYITGTFLTSNDPEVNPTFHRWNKVFIPYCSGDLFVGRKQARDHG 158
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: A0A7S4LZT2_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4LZT2_GUITH) HSP 1 Score: 61.6 bits (148), Expect = 1.350e-8 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1
Query: 22 AVCADGSRGHYFAATNTSSVD-------FVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYLMDAEASDGG-GLYFGGRPYL 363
A C DGS G Y+ A +S ++V+L GG C ++T C + T S ++S FP+ G+LS D + L +T NKVYVPYC+ D Y+ DA+ASD G +F G+ +
Sbjct: 48 ARCNDGSGGAYYFAPASSRGGAMARTDMWLVFLMGGGWC-WDETSCAS---RYSTSPSLMSSKQFPEEREVDGILSADPTISPL-ATANKVYVPYCSSDAYVGDAQASDATYGWHFRGQELI 164
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: UPI0009E211A0 (pectin acetylesterase 4-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E211A0) HSP 1 Score: 58.9 bits (141), Expect = 2.960e-8 Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 22 AVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYC 288
A+C DGS ++ + S +VV LQ G +C + CL+ R+ +S + D + G + SDD EN ++S++NKV+VPYC
Sbjct: 83 ALCLDGSEAVFYLSRRPDSKHWVVQLQAGGSCGTYDS-CLD-----RSKGPLGSSKNYSDFLTGTFVASDDPAENPMFSSWNKVFVPYC 165
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Match: A0A1S3KIG8_LINUN (palmitoleoyl-protein carboxylesterase notum1 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KIG8_LINUN) HSP 1 Score: 60.1 bits (144), Expect = 4.760e-8 Identity = 39/111 (35.14%), Postives = 55/111 (49.55%), Query Frame = 1
Query: 19 TAVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLEQNRTGASFLTSDGFPDTIAGYGLLSDDAEENALYSTYNKVYVPYCTMDMYLMDAEASDGGGLYFGG 351
T C DGS Y+ + S ++VYL+GG C +Q C +R ++S+ +P+T G G+LS EEN + N VYVPYC+ D + AS G F G
Sbjct: 76 TVTCNDGSPAGYYIRQSYGSKRWIVYLEGGGYC-FDQLSCHGRWLNSR---KLMSSNEWPETKEGTGILSWHPEENPYFYHANIVYVPYCSSDSWSGHKMASGKGEFSFLG 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106124.494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig106124.494.1 >prot_H-elongata_contig106124.494.1 ID=prot_H-elongata_contig106124.494.1|Name=mRNA_H-elongata_contig106124.494.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp FVLLPSTAVCADGSRGHYFAATNTSSVDFVVYLQGGPACAHNQTLCLELLback to top mRNA from alignment at H-elongata_contig106124:421..789- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig106124.494.1 ID=mRNA_H-elongata_contig106124.494.1|Name=mRNA_H-elongata_contig106124.494.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=369bp|location=Sequence derived from alignment at H-elongata_contig106124:421..789- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig106124:421..789- >mRNA_H-elongata_contig106124.494.1 ID=mRNA_H-elongata_contig106124.494.1|Name=mRNA_H-elongata_contig106124.494.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig106124:421..789- (Himanthalia elongata Himel1 dioecious)back to top |