mRNA_H-elongata_contig105946.482.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A6H5KU51_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU51_9PHAE) HSP 1 Score: 123 bits (309), Expect = 6.130e-32 Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 1 FHDDLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQFHHYRP 258
FHDDLL +EPE E +I D+FLLMACDGLW VLGK EAV K F EG C+QA++ERMCELA+ G++DNVTVV++QFHH+RP
Sbjct: 296 FHDDLLTAEPEFQEAEIGLDDEFLLMACDGLWDVLGKREAVDYAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 381
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A835ZH46_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH46_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.190e-23 Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 1 FHDDLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQFHHYRP 258
F+DDLL++ P+ E +I + DQFLL+ACDGLW VL +AV + +G CAQ ++++CELA G++DNVTV+++ HH+ P
Sbjct: 72 FYDDLLVAHPDFHEEEITDEDQFLLLACDGLWDVLSHGDAVKHTLELLDQGLCAQGAAQQLCELATRLGTSDNVTVIIVSLHHHPP 157
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A812TH32_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TH32_SYMMI) HSP 1 Score: 83.6 bits (205), Expect = 7.460e-19 Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 FHDDLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQFHHYR 255
F DL+I +PE + ++ D+FL++A DGLW V+ K EAV V+ F EG + +S +CELA GS+DNVTVV++QF H R
Sbjct: 35 FMADLIIPDPECISVELQPCDEFLILASDGLWDVVSKPEAVRRVRASFDEGKPPETVSHDLCELAIRLGSSDNVTVVVVQFVHMR 119
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A7S1VL20_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VL20_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 1.060e-13 Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 1 FHDDLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQA-MSERMCELAHDRGSTDNVTVVLIQFHHYRP 258
F +++I+EPE+ ET + + D+FL+MACDGLW V EAV V E A+A + E++ A RGS DNV+VVL+ F H +P
Sbjct: 636 FTGEVVIAEPEVTETTLRKGDEFLIMACDGLWDVFSSEEAVTWVSERLQESTLARAFLGEQLVAEAIRRGSLDNVSVVLLFFDHEKP 722
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A8J5QJA4_9ASCO (MgPP2CL-1 n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QJA4_9ASCO) HSP 1 Score: 73.2 bits (178), Expect = 2.950e-13 Identity = 28/78 (35.90%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 10 DLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQF 243
DL+I +P T++ D+++++ACDG+W V+ ++A V +F++G+ A ++++C+LA D +TDNVTV++++F
Sbjct: 289 DLVIGKPFTTATEVTPDDEYIILACDGVWDVISDSKACSLVTELFSKGYDAHGAAKKLCQLAMDNSTTDNVTVMIVKF 366
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A642UVD8_DIURU (PPM-type phosphatase domain-containing protein n=1 Tax=Diutina rugosa TaxID=5481 RepID=A0A642UVD8_DIURU) HSP 1 Score: 72.0 bits (175), Expect = 5.500e-13 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 10 DLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQF 243
DL+I +P +T I + D+F+++ACDG+W V+ ++A V F E Q +++R+C+LA D +TDNVTV++++F
Sbjct: 219 DLVIGKPFTTQTTITDEDEFMIIACDGVWDVISDSKACQFVVDQFAEQLDVQTVAKRLCQLAMDLSTTDNVTVMVVKF 296
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: H8X5D0_CANO9 (Ptc1 protein phosphatase n=1 Tax=Candida orthopsilosis (strain 90-125) TaxID=1136231 RepID=H8X5D0_CANO9) HSP 1 Score: 72.0 bits (175), Expect = 8.870e-13 Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 10 DLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQF 243
DL++ +P T I + D+F+++ACDG+W V+ +A V F +G AQ S+++C+LA D +TDNVTV+++QF
Sbjct: 369 DLVLGKPFTTSTQIIKDDEFMIIACDGVWDVISDTKACKIVADCFKKGLDAQEASKKLCQLAIDASTTDNVTVMVVQF 446
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: G8BFU6_CANPC (PPM-type phosphatase domain-containing protein n=1 Tax=Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) TaxID=578454 RepID=G8BFU6_CANPC) HSP 1 Score: 71.6 bits (174), Expect = 1.210e-12 Identity = 29/81 (35.80%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 10 DLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQFHHY 252
DL++ +P T I + D+F+++ACDG+W V+ A+A V F G AQ ++++C++A + G+TDN+T ++++F H+
Sbjct: 371 DLVLGKPFTTSTQIIKDDEFMIIACDGVWDVISDAKACKIVADCFKNGMDAQEAAKKLCQMAINDGTTDNITCMVVKFRHF 451
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: A0A8H7ZHC6_9ASCO (MgPP2CL-1 n=1 Tax=Candida metapsilosis TaxID=273372 RepID=A0A8H7ZHC6_9ASCO) HSP 1 Score: 71.2 bits (173), Expect = 1.620e-12 Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 10 DLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLIQF 243
DL++ +P T I + D+F+++ACDG+W V+ +A V F G+ AQ S+++C+LA + +TDNVTV+++QF
Sbjct: 344 DLVLGKPFTTSTQIIKDDEFMIIACDGVWDVISDTKACRIVADCFERGYDAQEASKKLCQLAIEASTTDNVTVMVVQF 421
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Match: M2W265_GALSU (Protein phosphatase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W265_GALSU) HSP 1 Score: 70.5 bits (171), Expect = 1.970e-12 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 13 LLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEGFCAQAMSERMCELAHDRGSTDNVTVVLI 237
++I EP + + D+FL++ACDGLW V+ E V V+ + G Q++SER+ LA DRGSTDN++V++I
Sbjct: 228 VVIGEPHVTSETLTADDKFLILACDGLWDVVEDQEVVNFVQHLHVNGLDVQSISERLVRLALDRGSTDNISVMVI 302 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105946.482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105946.482.1 >prot_H-elongata_contig105946.482.1 ID=prot_H-elongata_contig105946.482.1|Name=mRNA_H-elongata_contig105946.482.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp FHDDLLISEPEIVETDIDEADQFLLMACDGLWGVLGKAEAVGSVKTMFTEback to top mRNA from alignment at H-elongata_contig105946:1516..2211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105946.482.1 ID=mRNA_H-elongata_contig105946.482.1|Name=mRNA_H-elongata_contig105946.482.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=696bp|location=Sequence derived from alignment at H-elongata_contig105946:1516..2211- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105946:1516..2211- >mRNA_H-elongata_contig105946.482.1 ID=mRNA_H-elongata_contig105946.482.1|Name=mRNA_H-elongata_contig105946.482.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig105946:1516..2211- (Himanthalia elongata Himel1 dioecious)back to top |